CK933978

Overview
NameCK933978
Unique NameCK933978
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length818
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1117 contig Csv1_Contig1117:51..868. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933978 vs. ExPASy Swiss-Prot
Match: GSTT1_HUMAN (Glutathione S-transferase theta-1 OS=Homo sapiens GN=GSTT1 PE=1 SV=4)

HSP 1 Score: 69.707 bits (169), Expect = 2.208e-11
Identity = 55/198 (27.78%), Postives = 98/198 (49.49%), Query Frame = 1
Query:   73 MVVKVYGPAYASPKRVILCLVEK-EIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNY-NPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSK-YLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWW 657
            M +++Y    + P R +    +K +I FE   VDLIKG+  S  + ++ P  ++P ++DGDF L ES AI+ Y   KY+        + ++ R  V+++L  +        +  L  +++F    G PV  + +  +  +L  TL + E++  ++K +L G   SLADL  I     L+ P+G    + + +   A W
Sbjct:    1 MGLELYLDLLSQPCRAVYIFAKKNDIPFELRIVDLIKGQHLSDAFAQVNPLKKVPALKDGDFTLTESVAILLYLTRKYKVP-DYWYPQDLQARARVDEYLAWQHTTLRRSCLRALWHKVMFPVFLGEPVSPQTLAATLAELDVTLQLLEDKFLQNKAFLTGPHISLADLVAIT---ELMHPVGAGCQVFEGRPKLATW 194          
BLAST of CK933978 vs. ExPASy Swiss-Prot
Match: GST1D_ANOGA (Glutathione S-transferase 1, isoform D OS=Anopheles gambiae GN=GstD1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.208e-11
Identity = 51/162 (31.48%), Postives = 77/162 (47.53%), Query Frame = 1
Query:   88 YGPAYASPKRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLS 573
            Y P  A  + V +      +E      DL+KGE   PE+LKL P   +P + D  F L+ESRAI  Y AEKY  +  +L  K  ++R +V Q L  +         +     +F+ +   P +EK +K++   L   L+  E       Y AG+  ++ADLS
Sbjct:    5 YLPGSAPCRAVQMTAAAVGVELNLKLTDLMKGEHMKPEFLKLNPQHCIPTLVDNGFALWESRAIQIYLAEKY-GKDDKLYPKDPQKRAVVNQRLYFDMGTLYQRFADYHYPQIFAKQPANPENEKKMKDAVGFLNTFLEGQE-------YAAGNDLTIADLS 158          
BLAST of CK933978 vs. ExPASy Swiss-Prot
Match: GST1_SCHPO (Glutathione S-transferase 1 OS=Schizosaccharomyces pombe GN=gst1 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.884e-11
Identity = 52/179 (29.05%), Postives = 91/179 (50.84%), Query Frame = 1
Query:   70 TMVVKVYGPAYASPKRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQD---GDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYL 597
            T+    +GP   +P +V+  L E ++ +ET  V+  K EQ+SPE+L L P G +P + D    D+ ++ES AI+ Y A+KY ++    L +   E   V Q+L  +A         +  Q  + S + + +    +     ++ + L V E+ L    YL  + F++ADLS I + ++L
Sbjct:    5 TLWSHAHGP---NPWKVVQALKELDLTYETRYVNFSKNEQKSPEHLALNPNGRVPTLIDHHNNDYTIWESDAILIYLADKYDTERKISLPRDHPEYYKVIQYLFFQASGQG----IIWGQAGWFSVYHQELVISAITRYRNEIKRVLGVLEDILKDRDYLVANRFTIADLSFISWNNFL 176          
BLAST of CK933978 vs. ExPASy Swiss-Prot
Match: Y4223_DICDI (Glutathione S-transferase domain-containing protein DDB_G0274223 OS=Dictyostelium discoideum GN=DDB_G0274223 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.919e-11
Identity = 56/200 (28.00%), Postives = 101/200 (50.50%), Query Frame = 1
Query:  115 RVILCLVEKE--IEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGD----FILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYL-VGPMGRQHMIRDRKHVSAWWDDISNRPSWKKV 693
            ++IL  +EK+  I FE+  +++ K E  S E++K+ P  ++P I D      F+++ES +I+ Y A+KY +   +      E   ++  W   +A N  PA      Q    S F   V E  +   + +  + L + ++RLS S+Y+ G+ FS+AD++   +  YL   P+ +    R   H+  W D I+ R + K++
Sbjct:   24 KLILLELEKKHSITFESRYINITKKENYSDEFVKINPNKKVPAIVDQTGEKPFVVFESVSILIYLAQKYNTFLPDFKTNPHENSDVIT-WAVWQAANLGPAFG----QYFHFSYFSPTVQEYSLHRFNNEAQRVLRLLDDRLSVSQYIGGNEFSIADIASAGWLLYLNFAPIYKATKER-FPHIFKWLDLINQRDAVKEI 217          
BLAST of CK933978 vs. ExPASy Swiss-Prot
Match: GSTT2_MOUSE (Glutathione S-transferase theta-2 OS=Mus musculus GN=Gstt2 PE=2 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 6.424e-11
Identity = 49/197 (24.87%), Postives = 96/197 (48.73%), Query Frame = 1
Query:   73 MVVKVYGPAYASPKRVILCLVEKE-IEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSK-YLAGDFFSLADLSHIPFTHYLVGPMG-RQHMIRDRKHVSAW 654
            M +++Y    + P R +    +K  I F+T  VD++KG+  S ++ ++    ++PV++DG F+L ES AI+ Y + KY+          ++ R  V ++L   A N       L    +     G  V ++ V+ + +++   L   E++  + + +L G   +LADL  +     L+ P+G   ++   R  ++AW
Sbjct:    1 MGLELYLDLLSQPSRAVYIFAKKNGIPFQTRTVDILKGQHMSEQFSQVNCLNKVPVLKDGSFVLTESTAILIYLSSKYQ-VADHWYPADLQARAQVHEYLGWHADNIRGTFGVLLWTKVLGPLIGVQVPQEKVERNRDRMVLVLQQLEDKFLRDRAFLVGQQVTLADLMSL---EELMQPVGLGYNLFEGRPQLTAW 193          
BLAST of CK933978 vs. ExPASy Swiss-Prot
Match: GSTT2_HUMAN (Glutathione S-transferase theta-2 OS=Homo sapiens GN=GSTT2 PE=1 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 6.424e-11
Identity = 56/198 (28.28%), Postives = 98/198 (49.49%), Query Frame = 1
Query:   73 MVVKVYGPAYASPKRVILCLVEKE-IEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAI-YELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEER-LSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQH-MIRDRKHVSAW 654
            M ++++    + P R +    +K  I  E   VDL+KG+ +S E+L++   G+LP ++DGDFIL ES AI+ Y + KY++         ++ R  V ++L   A          L +Q+L     G  V E+ V+ +   + + L   E++ L    +LAG   +LADL  +     L+ P+   + +   R  ++AW
Sbjct:    1 MGLELFLDLVSQPSRAVYIFAKKNGIPLELRTVDLVKGQHKSKEFLQINSLGKLPTLKDGDFILTESSAILIYLSCKYQTP-DHWYPSDLQARARVHEYLGWHADCIRGTFGIPLWVQVL-GPLIGVQVPEEKVERNRTAMDQALQWLEDKFLGDRPFLAGQQVTLADLMAL---EELMQPVALGYELFEGRPRLAAW 193          
BLAST of CK933978 vs. ExPASy Swiss-Prot
Match: GSTT1_BOVIN (Glutathione S-transferase theta-1 OS=Bos taurus GN=GSTT1 PE=2 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 6.424e-11
Identity = 58/201 (28.86%), Postives = 99/201 (49.25%), Query Frame = 1
Query:   73 MVVKVYGPAYASPKRVILCLVEKE-IEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVE----AHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSK-YLAGDFFSLADLSHIPFTHYLVGPMGRQ-HMIRDRKHVSAW 654
            M +++Y    + P R I    +K  I FE   VDL KG+  S  + ++ P  ++P+++DGDFIL ES AI+ Y A KY+        + ++    V+++L  +      N   A++   +  +F    G PV  +++  +  +L   L V E +  + K +L G   SLADL  I     L+ P+G    + + R  ++AW
Sbjct:    1 MGLELYLDLLSQPCRAIYIFAKKNRIPFELRTVDLRKGQHLSDAFAQVNPLQKVPILKDGDFILTESVAILLYLARKYKVP-DHWYPQDLQACARVDEYLAWQHTALRRNCLRALWHKVMLPVF---LGEPVSPEMLATTLAELDMALQVLEGKFLQDKAFLTGSHISLADLVAIT---ELMHPVGAGCQVFKGRPKLAAW 194          
BLAST of CK933978 vs. ExPASy Swiss-Prot
Match: GSTA_PLEPL (Glutathione S-transferase A OS=Pleuronectes platessa PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.424e-11
Identity = 55/196 (28.06%), Postives = 96/196 (48.98%), Query Frame = 1
Query:  115 RVILCLVEKEIE-FETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPV-DEKLVKESDEKLGKTLDVYEERLSKS--KYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDR-KHVSAWWDDISNRPSWK 687
            RV++ L EK ++ + +  +   KGE +S E + + P G+LP  + G  +L ES A   Y   +++SQG +L+     E+ ++ Q              ++   + +S K       +  VK + E L   L ++EE L K+   ++AG  FSLAD+S  P   YL     R  +  +R   ++A+++ +  RPS K
Sbjct:   18 RVMIVLEEKNLQAYNSKLLSFEKGEHKSAEVMSMNPRGQLPSFKHGSKVLNESYAACMYLESQFKSQGNKLIPDCPAEQAMMYQ----RMFEGLTLAQKMADVIYYSWKVPEAERHDSAVKRNKENLSTELKLWEEYLQKTSGSFVAGKSFSLADVSVFPGVAYLF----RFGLTEERYPQLTAYYNSLKERPSIK 205          
The following BLAST results are available for this feature:
BLAST of CK933978 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
GSTT1_HUMAN2.208e-1127.78Glutathione S-transferase theta-1 OS=Homo sapiens ... [more]
GST1D_ANOGA2.208e-1131.48Glutathione S-transferase 1, isoform D OS=Anophele... [more]
GST1_SCHPO2.884e-1129.05Glutathione S-transferase 1 OS=Schizosaccharomyces... [more]
Y4223_DICDI4.919e-1128.00Glutathione S-transferase domain-containing protei... [more]
GSTT2_MOUSE6.424e-1124.87Glutathione S-transferase theta-2 OS=Mus musculus ... [more]
GSTT2_HUMAN6.424e-1128.28Glutathione S-transferase theta-2 OS=Homo sapiens ... [more]
GSTT1_BOVIN6.424e-1128.86Glutathione S-transferase theta-1 OS=Bos taurus GN... [more]
GSTA_PLEPL6.424e-1128.06Glutathione S-transferase A OS=Pleuronectes plates... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004542_H12 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IVF_H12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933978 ID=CK933978; Name=CK933978; organism=Citrus sinensis; type=EST; length=818bp
GGGGGCCCGTAGATTACGATCACAAGCTCACTTGCTGCTTTTTATCGACA
GAAAAAGTTAACACCAGCAACGATGGTGGTCAAGGTGTACGGTCCGGCTT
ATGCTTCTCCCAAACGAGTGATTTTGTGCTTGGTTGAGAAGGAAATCGAA
TTTGAAACTGTCCCCGTTGATCTCATCAAAGGAGAGCAGAGAAGTCCTGA
GTACCTCAAATTACAGCCTTTTGGAGAGCTTCCTGTCATTCAAGATGGAG
ATTTTATTTTATACGAGTCGCGAGCTATCATGAGGTACTACGCTGAAAAG
TACAGGTCTCAAGGAACCGAACTTCTGGGTAAAACAATTGAAGAAAGAGG
CCTGGTGGAACAGTGGCTAGAAGTAGAGGCACACAACTACAACCCAGCAA
TTTACGAGCTGACCATCCAACTTTTATTTTCCTCCAAGTTTGGACGTCCC
GTTGATGAAAAATTGGTGAAGGAGAGTGACGAAAAGCTTGGAAAAACGCT
CGACGTTTACGAGGAGAGGCTGTCGAAGAGCAAGTATTTGGCTGGTGATT
TCTTCAGCCTGGCTGATCTGAGTCACATTCCATTTACCCACTACTTGGTT
GGGCCGATGGGGAGACAGCATATGATTAGAGACAGGAAGCATGTGAGTGC
CTGGTGGGATGATATTAGCAACAGGCCGTCCTGGAAGAAAGTCCTTGAGC
TCTGTAAGACTCCTTTCGGCTGAGCTTGATTGTATGTGTTTCAATTTTCG
GGCTTGTGTTTTACTTCTCTACTACTTGGTTTGTTTCTGTCTGTGGGATA
TGTTTCTTGCATATGTGT
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