CK933992

Overview
NameCK933992
Unique NameCK933992
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK933992_ssr317 microsatellite CK933992_ssr317:317..328. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig8273 contig Csv1_Contig8273:1851..2742. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HSP90_SCHPO (Heat shock protein 90 homolog OS=Schizosaccharomyces pombe GN=swo1 PE=1 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 2.689e-37
Identity = 77/185 (41.62%), Postives = 124/185 (67.03%), Query Frame = 2
Query:    5 YEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKD-PEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 544
            ++V+F  DP+DEY +  L ++E KK  N++K+GL+L +  ++K    +L++ ++E  K  K  L  + V+ V VSN++  +PC++ T +YGWSANMERIM++Q L D S  AYM  ++  EINP+ PII EL+++V ++  ED  V+  A ++Y+TAL+ SGF+L+DP  +A RI   +   L+I
Sbjct:  491 FDVLFMVDPIDEYAVTQLKEFEGKKLVNITKDGLELEETDEEKAAREKLEKEYEEFAKQLKTILG-DKVEKVVVSNKIVGSPCLLTTGQYGWSANMERIMKAQALRDTSMSAYMSSRKTFEINPKSPIIAELKKKVEENGAEDRSVKDLATILYETALLSSGFTLDDPSAYAQRINRLISLGLSI 674          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HSP83_ARATH (Heat shock protein 81-3 OS=Arabidopsis thaliana GN=HSP81-3 PE=2 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 2.689e-37
Identity = 82/185 (44.32%), Postives = 120/185 (64.86%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDK----ELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 544
            G EV++  D +DEY +  L ++E KK  + +KEGLKL +   +K    ELKE F+ L K  K  L  + V+ V VS+R+ ++PC +VT +YGW+ANMERIM++Q L D+S   YM  K+ +EINP + I+ ELR+R   D  D  V+    L+++TAL+ SGFSL++P  F SRI+  +K  L+I
Sbjct:  486 GIEVLYMVDAIDEYAIGQLKEFEGKKLVSATKEGLKLDETEDEKKKKEELKEKFEGLCKVIKDVLG-DKVEKVIVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMGGYMSSKKTMEINPENSIMDELRKRADADKNDKSVKDLVLLLFETALLTSGFSLDEPNTFGSRIHRMLKLGLSI 669          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: ENPL_RABIT (Endoplasmin (Fragment) OS=Oryctolagus cuniculus GN=HSP90B1 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 7.825e-37
Identity = 82/190 (43.16%), Postives = 122/190 (64.21%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKES----FKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQS---QTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNISP 550
            GYEVI+ T+PVDEY +Q L +++ K+FQNV+KEG+K  +  K KE +E+    F+ L  W K     + ++   VS RL  +PC +V S+YGWSANMERIM++   QT  D++K  Y   ++  EINPRHP+I+++  R+ +D  D  V   A ++++TA++ SG+ L D K +  RI   V+ SLNI P
Sbjct:  481 GYEVIYLTEPVDEYCIQALPEFDGKRFQNVAKEGVKFDESEKTKESREATEKEFEPLLNWMKDKALKDKIEKAVVSQRLTESPCALVASQYGWSANMERIMKAQAYQTGKDSTK--YYASQKTFEINPRHPLIRDML-RIKED--DKTVMDLAVVLFETAILRSGYLLPDTKAYGDRIERIVRLSLNIDP 665          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HSP90_PODAN (Heat shock protein 90 homolog OS=Podospora anserina GN=MOD-E PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.783e-34
Identity = 76/186 (40.86%), Postives = 120/186 (64.52%), Query Frame = 2
Query:    2 GYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKES----FKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPE-DAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 544
            G+EV+F  DP+DEY M  L ++E KK  +++K+  +L +  ++K+ +E+    +  L K  K  L  + V+ V VS++L   PC + T ++GWSANMERIM++Q L D S  +YM  K+  EI+P+ PIIKEL+++V  D E D  V+   QL+++T+L+ SGF++ +P  FA RI+  V   LN+
Sbjct:  487 GFEVLFLVDPIDEYAMTQLKEFEGKKLVDITKD-FELEETEEEKKQREAEEKEYDGLAKALKNVLG-DKVEKVVVSHKLVGAPCAIRTGQFGWSANMERIMKAQALRDTSMSSYMSSKKTFEISPKSPIIKELKQKVEADGENDKTVKSIVQLLFETSLLVSGFTIEEPAGFAERIHKLVALGLNL 670          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HSP82_YEAST (ATP-dependent molecular chaperone HSP82 OS=Saccharomyces cerevisiae GN=HSP82 PE=1 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.804e-33
Identity = 80/185 (43.24%), Postives = 119/185 (64.32%), Query Frame = 2
Query:    5 YEVIFFTDPVDEYLMQYLMDYEDKKFQNVSK----EGLKLGKDTKDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVK-DPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 544
            +EV+F TDP+DEY    L ++E K   +++K    E     K  ++KE+KE ++ LTK  K  L  + V+ V VS +L + P  + T ++GWSANMERIM++Q L D+S  +YM  K+  EI+P+ PIIKEL++RV +   +D  V+   +L+Y+TAL+ SGFSL++P  FASRI   +   LNI
Sbjct:  496 FEVLFLTDPIDEYAFTQLKEFEGKTLVDITKDFELEETDEEKAEREKEIKE-YEPLTKALKEILGDQ-VEKVVVSYKLLDAPAAIRTGQFGWSANMERIMKAQALRDSSMSSYMSSKKTFEISPKSPIIKELKKRVDEGGAQDKTVKDLTKLLYETALLTSGFSLDEPTSFASRINRLISLGLNI 678          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HSP90_CANAL (Heat shock protein 90 homolog OS=Candida albicans GN=HSP90 PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.356e-33
Identity = 79/185 (42.70%), Postives = 117/185 (63.24%), Query Frame = 2
Query:    5 YEVIFFTDPVDEYLMQYLMDYEDKKFQNVSK----EGLKLGKDTKDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKD-PEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 544
            +EV+F  DP+DEY M  L ++EDKK  +++K    E     K  ++KE+KE ++ LTK  K  L  + V+ V VS +L + P  + T ++GWSANMERIM++Q L D +  +YM  K+  EI+P  PIIKEL+++V  D  ED  V+    L++ TAL+ SGF+L++P +FA RI   +   LNI
Sbjct:  493 FEVLFMVDPIDEYAMTQLKEFEDKKLVDITKDFELEESDEEKAAREKEIKE-YEPLTKALKDILGDQ-VEKVVVSYKLVDAPAAIRTGQFGWSANMERIMKAQALRDTTMSSYMSSKKTFEISPSSPIIKELKKKVETDGAEDKTVKDLTTLLFDTALLTSGFTLDEPSNFAHRINRLIALGLNI 675          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HSC82_YEAST (ATP-dependent molecular chaperone HSC82 OS=Saccharomyces cerevisiae GN=HSC82 PE=1 SV=4)

HSP 1 Score: 141.354 bits (355), Expect = 6.855e-33
Identity = 79/185 (42.70%), Postives = 117/185 (63.24%), Query Frame = 2
Query:    5 YEVIFFTDPVDEYLMQYLMDYEDKKFQNVSK----EGLKLGKDTKDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVK-DPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 544
            +EV+F TDP+DEY    L ++E K   +++K    E     K  ++KE+KE ++ LTK  K  L  + V+ V VS +L + P  + T ++GWSANMERIM++Q L D+S  +YM  K+  EI+P+ PIIKEL++RV +   +D  V+    L+++TAL+ SGFSL +P  FASRI   +   LNI
Sbjct:  492 FEVLFLTDPIDEYAFTQLKEFEGKTLVDITKDFELEETDEEKAEREKEIKE-YEPLTKALKDILGDQ-VEKVVVSYKLLDAPAAIRTGQFGWSANMERIMKAQALRDSSMSSYMSSKKTFEISPKSPIIKELKKRVDEGGAQDKTVKDLTNLLFETALLTSGFSLEEPTSFASRINRLISLGLNI 674          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HSP90_ASPFU (Heat shock protein 90 OS=Aspergillus fumigatus GN=hsp90 PE=1 SV=3)

HSP 1 Score: 140.969 bits (354), Expect = 8.953e-33
Identity = 76/185 (41.08%), Postives = 117/185 (63.24%), Query Frame = 2
Query:    5 YEVIFFTDPVDEYLMQYLMDYEDKKFQNVSK----EGLKLGKDTKDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPE-DAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 544
            +EV+F  DP+DEY    L +++ KK  +++K    E  +  K  ++KE KE ++ L K  K  L  + V+ V VS++L  +PC + T ++GWSANMERIM++Q L D S  +YM  K+  EI+P+  IIKEL+++V  D E D  V+   QL+++T+L+ SGF++ +P  FA RI+  V   LNI
Sbjct:  493 FEVLFLVDPIDEYAFTQLKEFDGKKLVDITKDFELEETEEEKAEREKEEKE-YENLAKSLKNILG-DKVEKVVVSHKLVGSPCAIRTGQFGWSANMERIMKAQALRDTSMSSYMSSKKTFEISPKSSIIKELKKKVEADGENDRTVKSITQLLFETSLLVSGFTIEEPASFAERIHKLVSLGLNI 675          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HSP82_ASHGO (Heat shock protein HSP82 OS=Ashbya gossypii GN=HSP82 PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 9.899e-32
Identity = 75/185 (40.54%), Postives = 118/185 (63.78%), Query Frame = 2
Query:    5 YEVIFFTDPVDEYLMQYLMDYEDKKFQNVSK----EGLKLGKDTKDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKD-PEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 544
            +EV+F  DP+DEY  Q L ++E K+  +++K    E  +  K  +++E+KE F+ LT   K  L  + V+ V VS +L + P  + T ++GWSANMERIM++Q L D++  +YM  K++ EI+P+  IIKEL++RV  +  +D  V+    L+Y+TAL+ SGF+L +P  FA+RI   +   LNI
Sbjct:  491 FEVLFLVDPIDEYAFQQLKEFEGKQLVDITKDFELEESEEEKKQREEEIKE-FEPLTAALKEVLGDQ-VEKVVVSYKLIDAPAAIRTGQFGWSANMERIMKAQALRDSTMSSYMASKKIFEISPKSAIIKELKKRVEDNGAQDRTVKDLTSLLYETALLTSGFTLEEPASFATRINRLISLGLNI 673          
BLAST of CK933992 vs. ExPASy Swiss-Prot
Match: HSP90_PLAFP (Heat shock 90 kDa protein homolog (Fragment) OS=Plasmodium falciparum (isolate Palo Alto / Uganda) PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.338e-28
Identity = 67/165 (40.61%), Postives = 104/165 (63.03%), Query Frame = 2
Query:   62 DYEDKKFQNVSKEGLKLGKDTKDKE----LKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 544
            D++ KK +  +KEGL +    + K+    LK  ++ L K  K  L  + V+ V V  R+ ++PCV+VTS++GWSANMERIM++Q L D S  +YM  K+++EIN RHPII  L+++   D  D  V+    L++ T+L+ SGF+L +P  F+ RI+  +K  L+I
Sbjct:    2 DFDGKKLKCCTKEGLDIHHSEEAKKDFETLKAEYEGLCKVIKDVL-HKKVEKVVVGQRITDSPCVLVTSEFGWSANMERIMKAQALRDNSMTSYMLSKKIMEINARHPIISALKQKADADKSDKTVKYLIWLLFDTSLLTSGFALEEPTTFSKRIHRMIKLGLSI 165          
The following BLAST results are available for this feature:
BLAST of CK933992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 315
Match NameE-valueIdentityDescription
HSP90_SCHPO2.689e-3741.62Heat shock protein 90 homolog OS=Schizosaccharomyc... [more]
HSP83_ARATH2.689e-3744.32Heat shock protein 81-3 OS=Arabidopsis thaliana GN... [more]
ENPL_RABIT7.825e-3743.16Endoplasmin (Fragment) OS=Oryctolagus cuniculus GN... [more]
HSP90_PODAN2.783e-3440.86Heat shock protein 90 homolog OS=Podospora anserin... [more]
HSP82_YEAST1.804e-3343.24ATP-dependent molecular chaperone HSP82 OS=Sacchar... [more]
HSP90_CANAL2.356e-3342.70Heat shock protein 90 homolog OS=Candida albicans ... [more]
HSC82_YEAST6.855e-3342.70ATP-dependent molecular chaperone HSC82 OS=Sacchar... [more]
HSP90_ASPFU8.953e-3341.08Heat shock protein 90 OS=Aspergillus fumigatus GN=... [more]
HSP82_ASHGO9.899e-3240.54Heat shock protein HSP82 OS=Ashbya gossypii GN=HSP... [more]
HSP90_PLAFP1.338e-2840.61Heat shock 90 kDa protein homolog (Fragment) OS=Pl... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004542_G03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IVF_G03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933992 ID=CK933992; Name=CK933992; organism=Citrus sinensis; type=EST; length=894bp
GGGCTATGAGGTGATTTTCTTCACTGATCCAGTTGATGAATACCTGATGC
AATACCTGATGGATTATGAAGACAAAAAGTTCCAAAATGTATCTAAAGAG
GGTCTTAAACTTGGTAAAGACACTAAAGATAAGGAACTTAAGGAGTCATT
CAAGGAGCTCACGAAATGGTGGAAGGGTGCTCTTGCCAGCGAGAACGTGG
ATGATGTGAAAGTAAGCAACCGCTTGGATAACACCCCTTGCGTAGTTGTG
ACATCAAAGTATGGTTGGAGTGCGAATATGGAGAGGATCATGCAGTCTCA
GACTCTCTCAGATGCTAGCAAGCAAGCATATATGCGGGGCAAGAGGGTGC
TTGAAATCAATCCAAGGCATCCAATCATCAAAGAGCTCCGGGAGAGAGTC
GTCAAGGACCCTGAGGATGCGGGTGTCCAGCAAACAGCCCAACTCATTTA
CCAGACGGCACTCATGGAGAGTGGCTTTTCGCTCAATGATCCCAAGGATT
TTGCCTCCCGAATTTACAGCACGGTGAAATCTAGCCTTAACATTAGCCCT
GATGCAGCTGTTGAGGAGGAAGATGATGTAGAAGAGACTGATGCTGACAC
TGAAATGAAAGAATCTTCGGCTGCCAAAGAGGACGTGGATACAGAGTATT
CTGGCAAGGATGAGTTGTAGATTGCCTAATAAAAGCATGGGCAACAACAT
CCCAGTTTCTTAGGAAAGCATAAACGCTCTGCATAGTGCGTTCATTTCCA
GTTTTGAAAACTTTGGTGAAAAAACGTTTTAGATCTTAGATTCAATGTAA
CCATAATCACCGGGAATTTTGTCTTTTAACAGTTGACACTATCAATTATG
GATGAATCAGCGTGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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