CK934012

Overview
NameCK934012
Unique NameCK934012
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length772
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5392 contig Csv1_Contig5392:1..753. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934012 vs. ExPASy Swiss-Prot
Match: CAT1_PENJA (Catalase OS=Penicillium janthinellum PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.291e-34
Identity = 88/202 (43.56%), Postives = 113/202 (55.94%), Query Frame = 3
Query:  183 SLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDATKFPDV--IHAFKPNPKSHI----QEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHW 770
            +L   SRG  LL+D    E +  F RER+PER VHARG  A G F    D S+LT A    A G  TP + RFSTV   RGS +T RD  GFA +FY  EGN+D++GN+IPVFFI D    P +  +HA KPNP+ H+    Q+  RI D  +   +SL+  S    + G P+ Y + E    ++F LV  NGK      HW
Sbjct:   30 TLGAASRGATLLQDLLFTEIIFAFDRERVPERAVHARGTGAHGTFLSYEDWSNLTAASFLSAEGKFTPEMTRFSTVSGARGSADTARDVHGFATRFYVDEGNFDIVGNNIPVFFIWDVIIEPTLMALHAQKPNPRFHLPRGQQDPNRISDNLTARGDSLAQGSQISSERGSPKAYSNTEPNKHRSFRLVTDNGKQFQCSNHW 231          
BLAST of CK934012 vs. ExPASy Swiss-Prot
Match: CATA_PENJA (Catalase OS=Penicillium janthinellum PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.641e-13
Identity = 68/215 (31.63%), Postives = 100/215 (46.51%), Query Frame = 3
Query:  138 FMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDATKFPDVIHAFKPNPKSHIQEYWRILDFCS-----HLPESLSTFSWF-FDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKF 764
            F+     A V +++ SLT G  G +LL+D    +++  F R    ER  HA  A+A G F    D +  + A  F+A G Q   +  FSTV   +GS  T+RD   FA KF +     +L+GN+ P+ F      F  ++ A K    +    +    +  +      LP SL   S+F          +RHM G+G  TF LV K+G V+  KF
Sbjct:   13 FLAIMVAAAVESES-SLTDGDAGALLLQDISEWDEVFRFDRLEAVERAAHAAAAAAFGAFVARGDWT-ASAAAAFQAAGKQIAFMAAFSTVAGAKGS-ATVRDADAFAAKFASAAALQELVGNNSPISFFIFDLLFAAILFASKAKAANQ-AAFAAAAELAAESLFVRLP-SLHQVSFFALAGFAAVAAHRHMNGYGSHTFKLVAKDGSVYCSKF 222          
The following BLAST results are available for this feature:
BLAST of CK934012 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CAT1_PENJA1.291e-3443.56Catalase OS=Penicillium janthinellum PE=1 SV=1[more]
CATA_PENJA1.641e-1331.63Catalase OS=Penicillium janthinellum PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004542_E10 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IVF_E10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934012 ID=CK934012; Name=CK934012; organism=Citrus sinensis; type=EST; length=772bp
GGGGACACTCTTCTTGAGTCTCGACTCAACTCCACTTCTCCTTTCTTACG
ATAATAATAACAGTAGCAAAATCTTCAGCAAGAAATATCGCCATGGATCC
CTACAAATTGCTTCCGTCAACTACTCACAATGCCCCCTTTATGACTACAA
ATGCCGGCGCTCCTGTCTGGAACGACAATCACTCCTTGACTGTTGGAAGT
AGAGGTCCTGTCCTTCTTGAGGATTATCATCTGGTGGAGAAACTAGCTCA
TTTTGCCAGGGAGAGGATTCCAGAACGTGTCGTCCATGCTAGGGGAGCCA
GTGCTAAGGGTTTCTTTGAGTGCACCCATGATATTTCTCACCTTACTTGT
GCTGATCTTTTTCGAGCTCCAGGGGTTCAGACACCTGTCATTGTTCGCTT
CTCCACTGTTATCCATGAGCGGGGCAGCCCTGAGACACTCAGGGATCCTC
GAGGATTTGCAGTCAAGTTTTACACCAGAGAGGGTAATTGGGATCTTCTG
GGTAACAGTATCCCTGTTTTTTTCATCCGTGATGCAACCAAATTCCCAGA
TGTGATCCATGCTTTTAAACCTAATCCAAAGTCTCACATCCAAGAGTACT
GGAGGATCCTCGACTTCTGCTCCCACCTTCCTGAAAGCTTGTCCACATTT
TCCTGGTTCTTTGATGATGTGGGTATTCCACAAGATTACAGGCACATGGA
AGGCTTCGGTGTTCAAACTTTTACACTGGTCAATAAGAATGGGAAAGTGC
ACTATGTGAAATTCCACTGGAA
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