CK934012

Overview
NameCK934012
Unique NameCK934012
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length772
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5392 contig Csv1_Contig5392:1..753. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934012 vs. ExPASy Swiss-Prot
Match: CATA1_SOLTU (Catalase isozyme 1 OS=Solanum tuberosum GN=CAT1 PE=2 SV=1)

HSP 1 Score: 355.525 bits (911), Expect = 1.830e-97
Identity = 166/226 (73.45%), Postives = 188/226 (83.19%), Query Frame = 3
Query:   93 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDATKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHW 770
            MDP K  PS+ ++ PF+TTNAG PV+N+  SLTVG RGPVLLEDY+L+EKLA F RE+IPERVVHARGASAKGFFE THDISHLTCAD  RAPG QTPVI RFSTV+HERGSPE++RD RGF VKFY R GN+DL+GN++PVFF RDA  FPD I A KPNPKSHIQE WR LDF S LPESL TF++F+DDV +P DYRHMEGFGV  + L+NK GK HYVKFHW
Sbjct:    1 MDPSKYRPSSAYDTPFLTTNAGGPVYNNVSSLTVGPRGPVLLEDYYLIEKLATFDREKIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGAQTPVICRFSTVVHERGSPESIRDIRGFGVKFYNRGGNFDLVGNNVPVFFNRDAKSFPDTIRALKPNPKSHIQEDWRTLDFFSFLPESLHTFAFFYDDVCLPTDYRHMEGFGVHAYQLINKEGKAHYVKFHW 226          
BLAST of CK934012 vs. ExPASy Swiss-Prot
Match: CATA_VIBPA (Catalase OS=Vibrio parahaemolyticus GN=VPA0305 PE=3 SV=2)

HSP 1 Score: 257.299 bits (656), Expect = 6.782e-68
Identity = 120/220 (54.55%), Postives = 156/220 (70.91%), Query Frame = 3
Query:  111 LPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDATKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHW 770
            L ST+  A  +T + GAPV ++ +S+T G  G VLL+D HL++KL  FARERIPERVVHARG  A G F  + D S LT +  F   G  TPV VRFSTVIH +GSPETLRDPRGFA KFYT +GNWDL+GN++PVFFIRD+ KFPD++H+ KP+P +++Q+  R  DF SH P +    +W + ++G P  YR M+GFGV  +  +N+ G V+YVKF W
Sbjct:   14 LASTSLQAQTLTRDNGAPVGDNQNSITAGENGSVLLQDVHLIQKLQRFARERIPERVVHARGTGAHGEFVASGDFSDLTVSAPFTEKGKVTPVFVRFSTVIHSKGSPETLRDPRGFATKFYTEQGNWDLVGNNLPVFFIRDSIKFPDMVHSLKPSPVTNVQDPNRFFDFFSHEPSATHMLTWVYSNLGTPASYRTMDGFGVHAYKWINQQGDVNYVKFQW 233          
BLAST of CK934012 vs. ExPASy Swiss-Prot
Match: CATA_VIBCH (Catalase OS=Vibrio cholerae GN=VC_1585 PE=3 SV=2)

HSP 1 Score: 256.529 bits (654), Expect = 1.157e-67
Identity = 119/213 (55.87%), Postives = 154/213 (72.30%), Query Frame = 3
Query:  132 APFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDATKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHW 770
            A  +T + GAPV ++ +S+T G  G VLL+D HL++KL  FARERIPERVVHARG  A G F  + D S LT +  F + G  TPV VRFSTVIH +GSPETLRDPRGFA KFYT +GNWDL+GN++PVFFIRD+ KFPD++H+ KP+P +++Q+  R  DF SH P S    +W + ++G P  YR M+GFGV  +  +N+ G V+YVKFHW
Sbjct:   21 AQTLTRDNGAPVGDNQNSITAGEHGSVLLQDVHLIQKLQRFARERIPERVVHARGTGAHGEFVASGDFSDLTLSAPFTSKGKITPVFVRFSTVIHSKGSPETLRDPRGFATKFYTEQGNWDLVGNNLPVFFIRDSIKFPDMVHSLKPSPVTNLQDPNRFFDFFSHEPGSTHMLTWVYTNLGTPASYRTMDGFGVHAYKWINQKGDVNYVKFHW 233          
BLAST of CK934012 vs. ExPASy Swiss-Prot
Match: CATA_VIBVY (Catalase OS=Vibrio vulnificus (strain YJ016) GN=VVA0294 PE=3 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.511e-67
Identity = 119/220 (54.09%), Postives = 158/220 (71.82%), Query Frame = 3
Query:  111 LPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDATKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHW 770
            L S + +A  +T + GAPV ++ +S+T G  G VLL+D HL++KL  FARERIPERVVHARG  A G F  + D S LT +  F   G  TPV VRFSTVIH +GSPETLRDPRGFA KFYT +GNWDL+GN++PVFFIRD+ KFPD++H+ KP+P +++Q+  R  DF S  P + +  +W + ++G P  YR M+GFGV  +  +N+ G+V+YVKFHW
Sbjct:   14 LASISVHAQTLTRDNGAPVGDNQNSITAGENGSVLLQDVHLIQKLQRFARERIPERVVHARGTGAHGEFVASGDFSDLTLSSPFAQSGKVTPVFVRFSTVIHSKGSPETLRDPRGFATKFYTDQGNWDLVGNNLPVFFIRDSIKFPDMVHSLKPSPVTNLQDPNRFFDFFSSQPSATNMLTWVYTNLGTPASYRTMDGFGVHAYKWINQKGEVNYVKFHW 233          
BLAST of CK934012 vs. ExPASy Swiss-Prot
Match: CATA_VIBVU (Catalase OS=Vibrio vulnificus GN=VV2_1473 PE=3 SV=2)

HSP 1 Score: 256.144 bits (653), Expect = 1.511e-67
Identity = 119/220 (54.09%), Postives = 158/220 (71.82%), Query Frame = 3
Query:  111 LPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDATKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHW 770
            L S + +A  +T + GAPV ++ +S+T G  G VLL+D HL++KL  FARERIPERVVHARG  A G F  + D S LT +  F   G  TPV VRFSTVIH +GSPETLRDPRGFA KFYT +GNWDL+GN++PVFFIRD+ KFPD++H+ KP+P +++Q+  R  DF S  P + +  +W + ++G P  YR M+GFGV  +  +N+ G+V+YVKFHW
Sbjct:   14 LASISVHAQTLTRDNGAPVGDNQNSITAGENGSVLLQDVHLIQKLQRFARERIPERVVHARGTGAHGEFVVSGDFSDLTLSSPFAQSGKVTPVFVRFSTVIHSKGSPETLRDPRGFATKFYTDQGNWDLVGNNLPVFFIRDSIKFPDMVHSLKPSPVTNLQDPNRFFDFFSSQPSATNMLTWVYTNLGTPASYRTMDGFGVHAYKWINRKGEVNYVKFHW 233          
BLAST of CK934012 vs. ExPASy Swiss-Prot
Match: CATA1_CAEEL (Peroxisomal catalase 1 OS=Caenorhabditis elegans GN=ctl-2 PE=2 SV=3)

HSP 1 Score: 249.98 bits (637), Expect = 1.083e-65
Identity = 116/210 (55.24%), Postives = 152/210 (72.38%), Query Frame = 3
Query:  141 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDATKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHW 770
            +TT+ GAP+++    LT G RGP+L++D   ++++AHF RERIPERVVHA+GA A G+FE THDIS    AD+F   G QTP+++RFSTV  E GS +T RDPRGFA+KFYT EGNWDL+GN+ P+FFIRD   FP+ IH  K NP++H+++   I DF  H PE+L    + F D G+P  YRHM G+G  TF +VNK+GK  YVKFH+
Sbjct:   23 ITTSNGAPIYSKTAVLTAGRRGPMLMQDVVYMDEMAHFDRERIPERVVHAKGAGAHGYFEVTHDISKYCKADIFNKVGKQTPLLIRFSTVGGESGSADTARDPRGFAIKFYTEEGNWDLVGNNTPIFFIRDPIHFPNFIHTQKRNPQTHLKDPNMIFDFWLHRPEALHQVMFLFSDRGLPDGYRHMNGYGSHTFKMVNKDGKAIYVKFHF 232          
BLAST of CK934012 vs. ExPASy Swiss-Prot
Match: CATB_PSEAE (Catalase OS=Pseudomonas aeruginosa GN=katB PE=3 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.197e-64
Identity = 121/220 (55.00%), Postives = 153/220 (69.55%), Query Frame = 3
Query:  111 LPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDATKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHW 770
            L S +  A  +T + GAPV ++ +S T G  G VLL+D  L++KL  F RERIPERVVHARG  A G F  + DIS L+ A +FR  G +TPV VRFS V+H   SPETLRDPRGFA KFYT +GNWDL+GN+ P FFIRDA KFPD++HAFKP+P+S++ +  R  DF SH+PE+  T +  + + G P  YR M+G  V  + LVN  G+VHYVKFHW
Sbjct:   23 LLSLSVQAATLTRDNGAPVGDNQNSQTAGPNGSVLLQDVQLLQKLQRFDRERIPERVVHARGTGAHGEFVASADISDLSMAKVFRK-GEKTPVFVRFSAVVHGNHSPETLRDPRGFATKFYTADGNWDLVGNNFPTFFIRDAIKFPDMVHAFKPDPRSNLDDDSRRFDFFSHVPEATRTLTLLYSNEGTPASYREMDGNSVHAYKLVNARGEVHYVKFHW 241          
BLAST of CK934012 vs. ExPASy Swiss-Prot
Match: CATB_PSESY (Catalase OS=Pseudomonas syringae pv. syringae GN=katB PE=1 SV=2)

HSP 1 Score: 244.973 bits (624), Expect = 3.483e-64
Identity = 117/217 (53.92%), Postives = 154/217 (70.97%), Query Frame = 3
Query:  120 TTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDATKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHW 770
            T +    +T + GA V ++ +S T G++GPVLL+D  L++KL  F RERIPERVVHARG   KG F  + DIS L+ A +F++ G +TPV VRFS+V+H   SPETLRDP GFA KFYT +GNWDL+GN+ P FFIRDA KFPD++HAFKP+P++++    R  DF SH+PE+  T +  + + G P  YR M+G GV  + LVN  G+VHYVKFHW
Sbjct:   23 TVYATDTLTRDNGAVVGDNQNSQTAGAQGPVLLQDVQLLQKLQRFDRERIPERVVHARGTGVKGEFTASADISDLSKATVFKS-GEKTPVFVRFSSVVHGNHSPETLRDPHGFATKFYTADGNWDLVGNNFPTFFIRDAIKFPDMVHAFKPDPRTNLDNDSRRFDFFSHVPEATRTLTLLYSNEGTPAGYRFMDGNGVHAYKLVNAKGEVHYVKFHW 238          
BLAST of CK934012 vs. ExPASy Swiss-Prot
Match: CATA_BOVIN (Catalase OS=Bos taurus GN=CAT PE=1 SV=3)

HSP 1 Score: 243.432 bits (620), Expect = 1.013e-63
Identity = 117/210 (55.71%), Postives = 151/210 (71.90%), Query Frame = 3
Query:  141 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDATKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHW 770
            +TT  G PV +  +SLTVG RGP+L++D    +++AHF RERIPERVVHA+GA A G+FE THDI+  + A +F   G +TP+ VRFSTV  E GS +T+RDPRGFAVKFYT +GNWDL+GN+ P+FFIRDA  FP  IH+ K NP++H+++   + DF S  PESL   S+ F D GIP  +RHM G+G  TF LVN NG+  Y KFH+
Sbjct:   27 LTTGGGNPVGDKLNSLTVGPRGPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITRYSKAKVFEHIGKRTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDALLFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLFSDRGIPDGHRHMNGYGSHTFKLVNANGEAVYCKFHY 236          
BLAST of CK934012 vs. ExPASy Swiss-Prot
Match: CATE_BACSU (Catalase-2 OS=Bacillus subtilis GN=katE PE=3 SV=2)

HSP 1 Score: 243.047 bits (619), Expect = 1.324e-63
Identity = 119/224 (53.12%), Postives = 147/224 (65.62%), Query Frame = 3
Query:  120 TTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDATKFPDVIHAFKPNPKSHIQE-------YWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHW 770
            T ++   MTTN G  V  D HSL  G RGP L+ED+H  EK+ HF  ERIPERVVHARG    GFF+    ++  T A   + P V+TPV VRFSTV   +GS +T+RD RGFA KFYT EGN+DL+GN+IPVFFI+DA KFPD++HAFKP P + + +       +W   DF ++ PES     W   D GIP+ YR MEGFGV TF  VN+ GK  +VKFHW
Sbjct:   23 TDNSGKKMTTNQGLRVSEDEHSLKAGVRGPTLMEDFHFREKMTHFDHERIPERVVHARGFGVHGFFQVYEPMTEYTRAKFLQDPSVKTPVFVRFSTVAGSKGSADTVRDARGFATKFYTEEGNYDLVGNNIPVFFIQDAIKFPDLVHAFKPEPHNEMPQAATAHDTFW---DFVANNPESAHMVMWTMSDRGIPRSYRMMEGFGVHTFRFVNEQGKARFVKFHW 243          
The following BLAST results are available for this feature:
BLAST of CK934012 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CATA1_SOLTU1.830e-9773.45Catalase isozyme 1 OS=Solanum tuberosum GN=CAT1 PE... [more]
CATA_VIBPA6.782e-6854.55Catalase OS=Vibrio parahaemolyticus GN=VPA0305 PE=... [more]
CATA_VIBCH1.157e-6755.87Catalase OS=Vibrio cholerae GN=VC_1585 PE=3 SV=2[more]
CATA_VIBVY1.511e-6754.09Catalase OS=Vibrio vulnificus (strain YJ016) GN=VV... [more]
CATA_VIBVU1.511e-6754.09Catalase OS=Vibrio vulnificus GN=VV2_1473 PE=3 SV=... [more]
CATA1_CAEEL1.083e-6555.24Peroxisomal catalase 1 OS=Caenorhabditis elegans G... [more]
CATB_PSEAE1.197e-6455.00Catalase OS=Pseudomonas aeruginosa GN=katB PE=3 SV... [more]
CATB_PSESY3.483e-6453.92Catalase OS=Pseudomonas syringae pv. syringae GN=k... [more]
CATA_BOVIN1.013e-6355.71Catalase OS=Bos taurus GN=CAT PE=1 SV=3[more]
CATE_BACSU1.324e-6353.13Catalase-2 OS=Bacillus subtilis GN=katE PE=3 SV=2[more]

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Properties
Property NameValue
Genbank descriptionCGF1004542_E10 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IVF_E10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934012 ID=CK934012; Name=CK934012; organism=Citrus sinensis; type=EST; length=772bp
GGGGACACTCTTCTTGAGTCTCGACTCAACTCCACTTCTCCTTTCTTACG
ATAATAATAACAGTAGCAAAATCTTCAGCAAGAAATATCGCCATGGATCC
CTACAAATTGCTTCCGTCAACTACTCACAATGCCCCCTTTATGACTACAA
ATGCCGGCGCTCCTGTCTGGAACGACAATCACTCCTTGACTGTTGGAAGT
AGAGGTCCTGTCCTTCTTGAGGATTATCATCTGGTGGAGAAACTAGCTCA
TTTTGCCAGGGAGAGGATTCCAGAACGTGTCGTCCATGCTAGGGGAGCCA
GTGCTAAGGGTTTCTTTGAGTGCACCCATGATATTTCTCACCTTACTTGT
GCTGATCTTTTTCGAGCTCCAGGGGTTCAGACACCTGTCATTGTTCGCTT
CTCCACTGTTATCCATGAGCGGGGCAGCCCTGAGACACTCAGGGATCCTC
GAGGATTTGCAGTCAAGTTTTACACCAGAGAGGGTAATTGGGATCTTCTG
GGTAACAGTATCCCTGTTTTTTTCATCCGTGATGCAACCAAATTCCCAGA
TGTGATCCATGCTTTTAAACCTAATCCAAAGTCTCACATCCAAGAGTACT
GGAGGATCCTCGACTTCTGCTCCCACCTTCCTGAAAGCTTGTCCACATTT
TCCTGGTTCTTTGATGATGTGGGTATTCCACAAGATTACAGGCACATGGA
AGGCTTCGGTGTTCAAACTTTTACACTGGTCAATAAGAATGGGAAAGTGC
ACTATGTGAAATTCCACTGGAA
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