CK934055

Overview
NameCK934055
Unique NameCK934055
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934055 vs. ExPASy Swiss-Prot
Match: XTHA_PHAAN (Xyloglucan endotransglucosylase/hydrolase protein A OS=Phaseolus angularis GN=XTHA PE=1 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 5.303e-69
Identity = 122/197 (61.93%), Postives = 144/197 (73.10%), Query Frame = 3
Query:  153 FYQDFDLTWGDKRAKIFNGGQLLSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQGPTHDEIDFEFLGNVSGQPYILHTNIFAQGKGNREQQFYLRFDPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWTKAPFTAYYRNFRAIPC 743
            F +++  TW     K  NGG  + L LD+ +G+GFQSK  YLFG   M +KLV GDSAGTVTA+YLSS    HDEIDFEFLGN +GQPYIL TN+F  GKG+REQ+ YL FDPT  +H YSV+W    ++F VD+ PIRVFKN+  LGV FP NQPMKIY+SLWNADDWATRGGL KTDW+KAPF A Y+ F    C
Sbjct:   31 FGRNYVPTWAFDHIKYLNGGSEIQLHLDKYTGTGFQSKGSYLFGHFSMYIKLVPGDSAGTVTAFYLSSTNAEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTTQYHRYSVLWNMYQIVFYVDDYPIRVFKNSNDLGVKFPFNQPMKIYNSLWNADDWATRGGLEKTDWSKAPFIASYKGFHIDGC 227          
BLAST of CK934055 vs. ExPASy Swiss-Prot
Match: XTH_WHEAT (Probable xyloglucan endotransglucosylase/hydrolase OS=Triticum aestivum GN=XTH PE=2 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 1.181e-68
Identity = 119/197 (60.41%), Postives = 149/197 (75.63%), Query Frame = 3
Query:  153 FYQDFDLTWGDKRAKIFNGGQLLSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQGPTHDEIDFEFLGNVSGQPYILHTNIFAQGKGNREQQFYLRFDPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWTKAPFTAYYRNFRAIPC 743
            F +++  TW        NGG+ + LSLD+ +G+GFQ++  YLFG   M +KLV GDSAGTVTA+YLSSQ   HDEIDFEFLGN +GQPYIL TN+F+ GKG+REQ+ YL FDPT+++H+YSV+W    + F VD+ PIRVFKN++ LGV +P +QPMK+YSSLWNADDWATRGG  KTDW+KAPF A YR F    C
Sbjct:   32 FDKNYVPTWAQDHIHYVNGGREVQLSLDKTTGTGFQTRGSYLFGHFSMHIKLVGGDSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFSGGKGDREQRIYLWFDPTKDYHSYSVLWNLYMIAFFVDDTPIRVFKNSKDLGVRYPFDQPMKLYSSLWNADDWATRGGREKTDWSKAPFVASYRGFHVDGC 228          
BLAST of CK934055 vs. ExPASy Swiss-Prot
Match: XTH_BRAOB (Xyloglucan endotransglucosylase/hydrolase OS=Brassica oleracea var. botrytis GN=XET16A PE=1 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 1.543e-68
Identity = 123/197 (62.44%), Postives = 144/197 (73.10%), Query Frame = 3
Query:  153 FYQDFDLTWGDKRAKIFNGGQLLSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQGPTHDEIDFEFLGNVSGQPYILHTNIFAQGKGNREQQFYLRFDPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWTKAPFTAYYRNFRAIPC 743
            F +++  TW     K  NGG  L L LD+ +G+GFQSK  YLFG   M +KL AGD+AG VTA+YLSS    HDEIDFEFLGN +GQP IL TN+F  GKGNREQ+ YL FDP++ +HTYSV+W    ++F VDNIPIRVFKNA+ LGV FP NQPMK+YSSLWNADDWATRGGL KT+W  APF A YR F    C
Sbjct:   34 FGRNYVPTWAFDHQKQLNGGSELQLILDKYTGTGFQSKGSYLFGHFSMHIKLPAGDTAGVVTAFYLSSTNNEHDEIDFEFLGNRTGQPVILQTNVFTGGKGNREQRIYLWFDPSKAYHTYSVLWNLYQIVFFVDNIPIRVFKNAKDLGVRFPFNQPMKLYSSLWNADDWATRGGLEKTNWANAPFIASYRGFHIDGC 230          
BLAST of CK934055 vs. ExPASy Swiss-Prot
Match: XTH4_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 4 OS=Arabidopsis thaliana GN=XTH4 PE=1 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 2.015e-68
Identity = 121/197 (61.42%), Postives = 144/197 (73.10%), Query Frame = 3
Query:  153 FYQDFDLTWGDKRAKIFNGGQLLSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQGPTHDEIDFEFLGNVSGQPYILHTNIFAQGKGNREQQFYLRFDPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWTKAPFTAYYRNFRAIPC 743
            F +++  TW     K FNGG  L L LD+ +G+GFQSK  YLFG   M +KL AGD+AG VTA+YLSS    HDEIDFEFLGN +GQP IL TN+F  GKGNREQ+ YL FDP++ +HTYS++W    ++F VDNIPIR FKNA+ LGV FP NQPMK+YSSLWNADDWATRGGL KT+W  APF A Y+ F    C
Sbjct:   35 FGRNYVPTWAFDHQKQFNGGSELQLILDKYTGTGFQSKGSYLFGHFSMHIKLPAGDTAGVVTAFYLSSTNNEHDEIDFEFLGNRTGQPAILQTNVFTGGKGNREQRIYLWFDPSKAYHTYSILWNMYQIVFFVDNIPIRTFKNAKDLGVRFPFNQPMKLYSSLWNADDWATRGGLEKTNWANAPFVASYKGFHIDGC 231          
BLAST of CK934055 vs. ExPASy Swiss-Prot
Match: XTH9_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 9 OS=Arabidopsis thaliana GN=XTH9 PE=2 SV=2)

HSP 1 Score: 245.358 bits (625), Expect = 3.011e-64
Identity = 108/180 (60.00%), Postives = 138/180 (76.67%), Query Frame = 3
Query:  204 NGGQLLSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQGPTHDEIDFEFLGNVSGQPYILHTNIFAQGKGNREQQFYLRFDPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWTKAPFTAYYRNFRAIPC 743
            N G++  L LD  SG+GF+S+  YLFG++ +Q+KLV GDSAGTVTA+Y+SS GP H+E DFEFLGN +G+PYI+ TNI+  G GNREQ+  L FDPT  FHTYS++W  + V+F+VD  PIRV KN E  G+PF K+Q M +YSS+WNADDWAT+GGLVKTDW+ APF A Y+ F+   C
Sbjct:   44 NEGEVTKLKLDNYSGAGFESRSKYLFGKVSIQIKLVEGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYIVQTNIYVNGVGNREQRLNLWFDPTTEFHTYSILWSKRSVVFMVDETPIRVQKNLEEKGIPFAKDQAMGVYSSIWNADDWATQGGLVKTDWSHAPFVASYKEFQIDAC 223          
BLAST of CK934055 vs. ExPASy Swiss-Prot
Match: XTH6_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 6 OS=Arabidopsis thaliana GN=XTH6 PE=2 SV=2)

HSP 1 Score: 241.506 bits (615), Expect = 4.348e-63
Identity = 107/198 (54.04%), Postives = 146/198 (73.74%), Query Frame = 3
Query:  153 FYQDFDLTWGDKRAKIFNGGQLLSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQGPT-HDEIDFEFLGNVSGQPYILHTNIFAQGKGNREQQFYLRFDPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWTKAPFTAYYRNFRAIPC 743
            F +DF   W +   +    G+ + L LD+ +G GF SKR YLFGR+ M++KL+ GDSAGTVTA+Y++S   T  DE+DFEFLGN SGQPY + TNIFA GKG+REQ+  L FDP+ ++HTY+++W  +H++F VD++PIR +KN E+  + +P +QPM +YS+LW ADDWATRGGL K DW+KAPF AYY++F    C
Sbjct:   35 FVEDFKAAWSESHIRQMEDGKAIQLVLDQSTGCGFASKRKYLFGRVSMKIKLIPGDSAGTVTAFYMNSDTATVRDELDFEFLGNRSGQPYSVQTNIFAHGKGDREQRVNLWFDPSMDYHTYTILWSHKHIVFYVDDVPIREYKNNEAKNIAYPTSQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYKDFDIEGC 232          
BLAST of CK934055 vs. ExPASy Swiss-Prot
Match: XTH7_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 7 OS=Arabidopsis thaliana GN=XTH7 PE=2 SV=2)

HSP 1 Score: 240.736 bits (613), Expect = 7.416e-63
Identity = 108/198 (54.55%), Postives = 145/198 (73.23%), Query Frame = 3
Query:  153 FYQDFDLTWGDKRAKIFNGGQLLSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQGPT-HDEIDFEFLGNVSGQPYILHTNIFAQGKGNREQQFYLRFDPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWTKAPFTAYYRNFRAIPC 743
            F  DF + W D      +GG+ + L LD  SG GF SK+ YLFGR+ M++KL+ GDSAGTVTA+Y++S   +  DE+DFEFLGN SGQPY + TN+FA GKG+REQ+  L FDP+R+FH Y++ W    ++F VDN+PIRV+KN E+  VP+P+ QPM +YS+LW ADDWATRGG+ K +W++APF AYY++F    C
Sbjct:   34 FEDDFRIAWSDTHITQIDGGRAIQLKLDPSSGCGFASKKQYLFGRVSMKIKLIPGDSAGTVTAFYMNSDTDSVRDELDFEFLGNRSGQPYTVQTNVFAHGKGDREQRVNLWFDPSRDFHEYAISWNHLRIVFYVDNVPIRVYKNNEARKVPYPRFQPMGVYSTLWEADDWATRGGIEKINWSRAPFYAYYKDFDIEGC 231          
BLAST of CK934055 vs. ExPASy Swiss-Prot
Match: XTH26_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 26 OS=Arabidopsis thaliana GN=XTH26 PE=2 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.265e-62
Identity = 112/197 (56.85%), Postives = 145/197 (73.60%), Query Frame = 3
Query:  153 FYQDFDLTWGDKRAKIFNGGQLLSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQGPTHDEIDFEFLGNVSGQPYILHTNIFAQGKGNREQQFYLRFDPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWTKAPFTAYYRNFRAIPC 743
            F ++F +TWG  +  +F  G  L L LD+ +GS  +SK  +LFG ++M +KLV G+SAGTV AYYLSS G THDEIDFEFLGN +GQPY +HTN++AQGKGNREQQF   F+PT  FH Y++ W P  V++ VD  PIRVF+N ES G+ +P  Q MK+++SLWNA+DWAT+GG VKT+WT APF A  R ++A  C
Sbjct:   29 FSKNFIVTWG--KDHMFMNGTNLRLVLDKSAGSAIKSKVAHLFGSVEMLIKLVPGNSAGTVAAYYLSSTGSTHDEIDFEFLGNATGQPYTIHTNLYAQGKGNREQQFRPWFNPTNGFHNYTIHWNPSEVVWFVDGTPIRVFRNYESEGIAYPNKQGMKVFASLWNAEDWATQGGRVKTNWTLAPFVAEGRRYKARAC 223          
BLAST of CK934055 vs. ExPASy Swiss-Prot
Match: XTH8_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 8 OS=Arabidopsis thaliana GN=XTH8 PE=2 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 8.485e-59
Identity = 106/204 (51.96%), Postives = 142/204 (69.61%), Query Frame = 3
Query:  153 FYQDFDLTWGDKRAKIFNGGQLLSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQ---GPTHDEIDFEFLGNVSGQPYILHTNIFAQGKGNREQQFYLRFDPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVP----FPKNQPMKIYSSLWNADDWATRGGLVKTDWTKAPFTAYYRNFRAIPC 743
            F  +F++ W +      + G++ +LSLD  +G GFQ+K  Y FG   M+LKLV GDSAG VTAYY+ S+   GP  DEIDFEFLGN +GQPYI+ TN++  G GNRE +  L FDPT+++HTYS++W    ++F VD +PIRV+KN++   VP    FP  +PM ++SS+WNADDWATRGGL KTDW KAPF + Y++F    C
Sbjct:   25 FEDNFNIMWSENHFTTSDDGEIWNLSLDNDTGCGFQTKHMYRFGWFSMKLKLVGGDSAGVVTAYYMCSENGAGPERDEIDFEFLGNRTGQPYIIQTNVYKNGTGNREMRHSLWFDPTKDYHTYSILWNNHQLVFFVDRVPIRVYKNSDK--VPNNDFFPNQKPMYLFSSIWNADDWATRGGLEKTDWKKAPFVSSYKDFAVEGC 226          
BLAST of CK934055 vs. ExPASy Swiss-Prot
Match: XTH10_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 10 OS=Arabidopsis thaliana GN=XTH10 PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.447e-58
Identity = 99/197 (50.25%), Postives = 139/197 (70.56%), Query Frame = 3
Query:  153 FYQDFDLTWGDKRAKIFNGGQLLSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQGPTHDEIDFEFLGNVSGQPYILHTNIFAQGKGNREQQFYLRFDPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWTKAPFTAYYRNFRAIPC 743
            F +DF +TW        N G+  +L LD+ SG+ F S + +LFG+IDM++KL+ G S GTV AYY+SS  P  DEIDFEFLGNV+GQPYIL TN++A+G  NRE++ +L FDP ++FHTYS++W    ++F+VD IPIR+++N    GV +P+ QPM + +SLWN + WATRGG  K DW+K PF A + +++   C
Sbjct:   37 FNKDFFVTWSPTHVNTSNDGRSRTLKLDQESGASFSSIQTFLFGQIDMKIKLIRGSSQGTVVAYYMSSDQPNRDEIDFEFLGNVNGQPYILQTNVYAEGLDNREERIHLWFDPAKDFHTYSILWNIHQIVFMVDQIPIRLYRNHGEKGVAYPRLQPMSVQASLWNGESWATRGGHDKIDWSKGPFVASFGDYKIDAC 233          
The following BLAST results are available for this feature:
BLAST of CK934055 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
XTHA_PHAAN5.303e-6961.93Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH_WHEAT1.181e-6860.41Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_BRAOB1.543e-6862.44Xyloglucan endotransglucosylase/hydrolase OS=Brass... [more]
XTH4_ARATH2.015e-6861.42Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH9_ARATH3.011e-6460.00Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH6_ARATH4.348e-6354.04Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH7_ARATH7.416e-6354.55Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH26_ARATH1.265e-6256.85Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH8_ARATH8.485e-5951.96Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH10_ARATH1.447e-5850.25Probable xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004542_A03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IVF_A03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934055 ID=CK934055; Name=CK934055; organism=Citrus sinensis; type=EST; length=832bp
GGGGACAAGGTTTTCAAACAGACAGCTTCTCTCTCTTGTTGTGTTATAAC
TCATACAGCAAATTAAGAACTATGGGTTATCATTATTCTTGTAATGGGTT
GTTGTTATTGGTGAGTGTTTTGATGGTTGTTGCCTCATCAGCTGTGGGTA
GCTTCTATCAAGACTTTGATTTAACATGGGGTGATAAGAGAGCTAAGATT
TTCAATGGCGGCCAACTTCTTTCTCTGTCTCTAGACAGAGTTTCTGGCTC
TGGTTTTCAGTCCAAGAGAGACTACTTATTTGGCAGAATTGATATGCAGC
TCAAGCTTGTTGCTGGTGACTCTGCTGGCACTGTCACTGCCTACTATCTG
TCTTCGCAAGGGCCGACTCATGATGAGATTGATTTTGAGTTCTTGGGAAA
TGTGAGCGGTCAGCCTTACATTCTTCACACAAATATATTCGCTCAGGGTA
AAGGCAACCGGGAGCAACAATTCTATCTCCGGTTTGATCCCACAAGAAAC
TTCCACACTTACTCCGTCATCTGGAAGCCCCAACACGTCATCTTCTTGGT
AGATAACATTCCCATTAGGGTGTTCAAAAATGCTGAATCTCTTGGAGTTC
CCTTCCCTAAAAACCAACCAATGAAGATTTACTCAAGTCTTTGGAATGCT
GATGACTGGGCTACAAGAGGAGGGTTGGTGAAAACTGACTGGACTAAGGC
TCCTTTCACAGCATATTACCGTAACTTCAGAGCCATTCCCTGTAACAACT
GTGGCTCTAAATGGTCATCAAGCTCCTCAGTTTCGGATGCTCAGCGTCAA
TGGCAGGCTAGAGACGAGCTTGATGCCACAAG
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