CK934058

Overview
NameCK934058
Unique NameCK934058
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length844
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934058 vs. ExPASy Swiss-Prot
Match: TPIS_SALPA (Triosephosphate isomerase OS=Salmonella paratyphi A GN=tpiA PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.028e-43
Identity = 104/248 (41.94%), Postives = 143/248 (57.66%), Query Frame = 1
Query:  115 VGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLE*RESGSTVAVVAEQTKAI--AEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVS---AEVAASXRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSA 840
            V GNWK NG+   V ++V+ L +                       ++   S   + AQN  +   GAFTGE SAEML ++   ++I+GHSERR    ES++ +  K A    QGL  + C+GET    E+G T  V A Q  A+   +  + ++  V+AYEPVWAIGTGK ATPAQAQ VH    K+++D+++   A++A    I YGGSVN +N  EL AQPD+DG LVGGASLK + F  I+K+A
Sbjct:    6 VMGNWKLNGSRHMVNELVANLRKELAGVAGCDVAIAPPEMYIDLAKRAAAGSHIMLGAQNVDLNLSGAFTGETSAEMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVH----KFIRDHIAKADAKIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAA 249          
BLAST of CK934058 vs. ExPASy Swiss-Prot
Match: TPIS_SALNS (Triosephosphate isomerase OS=Salmonella newport (strain SL254) GN=tpiA PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.028e-43
Identity = 104/248 (41.94%), Postives = 143/248 (57.66%), Query Frame = 1
Query:  115 VGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLE*RESGSTVAVVAEQTKAI--AEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVS---AEVAASXRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSA 840
            V GNWK NG+   V ++V+ L +                       ++   S   + AQN  +   GAFTGE SAEML ++   ++I+GHSERR    ES++ +  K A    QGL  + C+GET    E+G T  V A Q  A+   +  + ++  V+AYEPVWAIGTGK ATPAQAQ VH    K+++D+++   A++A    I YGGSVN +N  EL AQPD+DG LVGGASLK + F  I+K+A
Sbjct:    6 VMGNWKLNGSRHMVNELVANLRKELTGVAGCDVAIAPPEMYIDLAKRAAAGSHIMLGAQNVDLNLSGAFTGETSAEMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVH----KFIRDHIAKADAKIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAA 249          
BLAST of CK934058 vs. ExPASy Swiss-Prot
Match: TPIS_SALHS (Triosephosphate isomerase OS=Salmonella heidelberg (strain SL476) GN=tpiA PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.028e-43
Identity = 104/248 (41.94%), Postives = 143/248 (57.66%), Query Frame = 1
Query:  115 VGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLE*RESGSTVAVVAEQTKAI--AEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVS---AEVAASXRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSA 840
            V GNWK NG+   V ++V+ L +                       ++   S   + AQN  +   GAFTGE SAEML ++   ++I+GHSERR    ES++ +  K A    QGL  + C+GET    E+G T  V A Q  A+   +  + ++  V+AYEPVWAIGTGK ATPAQAQ VH    K+++D+++   A++A    I YGGSVN +N  EL AQPD+DG LVGGASLK + F  I+K+A
Sbjct:    6 VMGNWKLNGSRHMVNELVANLRKELTGVAGCDVAIAPPEMYIDLAKRAAAGSHIMLGAQNVDLNLSGAFTGETSAEMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVH----KFIRDHIAKADAKIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAA 249          
BLAST of CK934058 vs. ExPASy Swiss-Prot
Match: TPIS_SALG2 (Triosephosphate isomerase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=tpiA PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.028e-43
Identity = 104/248 (41.94%), Postives = 143/248 (57.66%), Query Frame = 1
Query:  115 VGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLE*RESGSTVAVVAEQTKAI--AEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVS---AEVAASXRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSA 840
            V GNWK NG+   V ++V+ L +                       ++   S   + AQN  +   GAFTGE SAEML ++   ++I+GHSERR    ES++ +  K A    QGL  + C+GET    E+G T  V A Q  A+   +  + ++  V+AYEPVWAIGTGK ATPAQAQ VH    K+++D+++   A++A    I YGGSVN +N  EL AQPD+DG LVGGASLK + F  I+K+A
Sbjct:    6 VMGNWKLNGSRHMVNELVANLRKELAGVAGCDVAIAPPEMYIDLAKRAAAGSHIMLGAQNVDLNLSGAFTGETSAEMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVH----KFIRDHIAKADAKIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAA 249          
BLAST of CK934058 vs. ExPASy Swiss-Prot
Match: TPIS_SALEP (Triosephosphate isomerase OS=Salmonella enteritidis PT4 (strain P125109) GN=tpiA PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.028e-43
Identity = 104/248 (41.94%), Postives = 143/248 (57.66%), Query Frame = 1
Query:  115 VGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLE*RESGSTVAVVAEQTKAI--AEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVS---AEVAASXRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSA 840
            V GNWK NG+   V ++V+ L +                       ++   S   + AQN  +   GAFTGE SAEML ++   ++I+GHSERR    ES++ +  K A    QGL  + C+GET    E+G T  V A Q  A+   +  + ++  V+AYEPVWAIGTGK ATPAQAQ VH    K+++D+++   A++A    I YGGSVN +N  EL AQPD+DG LVGGASLK + F  I+K+A
Sbjct:    6 VMGNWKLNGSRHMVNELVANLRKELAGVAGCDVAIAPPEMYIDLAKRAAAGSHIMLGAQNVDLNLSGAFTGETSAEMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVH----KFIRDHIAKADAKIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAA 249          
BLAST of CK934058 vs. ExPASy Swiss-Prot
Match: TPIS_SALDC (Triosephosphate isomerase OS=Salmonella dublin (strain CT_02021853) GN=tpiA PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.028e-43
Identity = 104/248 (41.94%), Postives = 143/248 (57.66%), Query Frame = 1
Query:  115 VGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLE*RESGSTVAVVAEQTKAI--AEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVS---AEVAASXRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSA 840
            V GNWK NG+   V ++V+ L +                       ++   S   + AQN  +   GAFTGE SAEML ++   ++I+GHSERR    ES++ +  K A    QGL  + C+GET    E+G T  V A Q  A+   +  + ++  V+AYEPVWAIGTGK ATPAQAQ VH    K+++D+++   A++A    I YGGSVN +N  EL AQPD+DG LVGGASLK + F  I+K+A
Sbjct:    6 VMGNWKLNGSRHMVNELVANLRKELAGVAGCDVAIAPPEMYIDLAKRAAAGSHIMLGAQNVDLNLSGAFTGETSAEMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVH----KFIRDHIAKADAKIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAA 249          
BLAST of CK934058 vs. ExPASy Swiss-Prot
Match: TPIS_SALCH (Triosephosphate isomerase OS=Salmonella choleraesuis GN=tpiA PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.028e-43
Identity = 104/248 (41.94%), Postives = 143/248 (57.66%), Query Frame = 1
Query:  115 VGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLE*RESGSTVAVVAEQTKAI--AEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVS---AEVAASXRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSA 840
            V GNWK NG+   V ++V+ L +                       ++   S   + AQN  +   GAFTGE SAEML ++   ++I+GHSERR    ES++ +  K A    QGL  + C+GET    E+G T  V A Q  A+   +  + ++  V+AYEPVWAIGTGK ATPAQAQ VH    K+++D+++   A++A    I YGGSVN +N  EL AQPD+DG LVGGASLK + F  I+K+A
Sbjct:    6 VMGNWKLNGSRHMVNELVANLRKELTGVAGCDVAIAPPEMYIDLAKRAAAGSHIMLGAQNVDLNLSGAFTGETSAEMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVH----KFIRDHIAKADAKIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAA 249          
BLAST of CK934058 vs. ExPASy Swiss-Prot
Match: TPIS_SALA4 (Triosephosphate isomerase OS=Salmonella agona (strain SL483) GN=tpiA PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.028e-43
Identity = 104/248 (41.94%), Postives = 143/248 (57.66%), Query Frame = 1
Query:  115 VGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLE*RESGSTVAVVAEQTKAI--AEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVS---AEVAASXRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSA 840
            V GNWK NG+   V ++V+ L +                       ++   S   + AQN  +   GAFTGE SAEML ++   ++I+GHSERR    ES++ +  K A    QGL  + C+GET    E+G T  V A Q  A+   +  + ++  V+AYEPVWAIGTGK ATPAQAQ VH    K+++D+++   A++A    I YGGSVN +N  EL AQPD+DG LVGGASLK + F  I+K+A
Sbjct:    6 VMGNWKLNGSRHMVNELVANLRKELTGVAGCDVAIAPPEMYIDLAKRAAAGSHIMLGAQNVDLNLSGAFTGETSAEMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVH----KFIRDHIAKADAKIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAA 249          
BLAST of CK934058 vs. ExPASy Swiss-Prot
Match: TPIS_FLAJ1 (Triosephosphate isomerase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=tpiA PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.028e-43
Identity = 97/246 (39.43%), Postives = 146/246 (59.35%), Query Frame = 1
Query:  103 RKFFVGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLE*RESGSTVAVVAEQTKAIAEKIS--NWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASXRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDII 831
            RK  V GNWK +  + + +++++ L                           +  +   V+AQN    +GGAFTGE+SA+ML ++ +  VILGHSERRA+ +E++  + +KV  AL   + VI C GE L+ R+SG+   +V  Q +     I+  +W  +VLAYEPVWAIGTG+ A+P QAQE+H  +R+ ++    AE+A    I+YGGSV   N KE+ ++PDVDG L+GGA+LK  +F+ I+
Sbjct:    2 RKSIVAGNWKMHKNAAQTEELLNELIAKIPAKTNAQVIVAPTFVNLQAAAAKLKNTTIGVSAQNVHQAEGGAFTGEISADMLTSIGVNTVILGHSERRAIFHETDALIANKVDTALKHDMTVIFCFGEELKDRQSGNHFNIVENQLRDGVFHIAKESWSKIVLAYEPVWAIGTGETASPEQAQEMHEFIRETIRKAFGAEIADEVSILYGGSVKPENAKEIFSKPDVDGGLIGGAALKADDFLAIV 247          
BLAST of CK934058 vs. ExPASy Swiss-Prot
Match: TPIS_ENT38 (Triosephosphate isomerase OS=Enterobacter sp. (strain 638) GN=tpiA PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.028e-43
Identity = 107/248 (43.15%), Postives = 142/248 (57.26%), Query Frame = 1
Query:  115 VGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLE*RESGSTVAVVAEQTKAI--AEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVS---AEVAASXRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSA 840
            V GNWK NG+   V ++++ L +                        +   S   + AQN  V   GAFTGE SAEML ++   ++I+GHSERR    ES++ +  K A    QGL  + C+GET    E+G T  V A Q  A+   +  S ++ VV+AYEPVWAIGTGK ATPAQAQ VH    K+++D+++   A+VA    I YGGSVN AN  EL  QPD+DG LVGGASLK + F  I+K+A
Sbjct:    6 VMGNWKLNGSRHMVNELIANLRKELAGVTGCAVAIAPPDIYLDLAKHAADGSHIVLGAQNVDVNLSGAFTGETSAEMLKDIGAKYIIIGHSERRTYHKESDELIAKKFAVLKEQGLIPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGASAFEGVVIAYEPVWAIGTGKSATPAQAQAVH----KFIRDHIAKADAKVAEQVIIQYGGSVNAANAAELFTQPDIDGALVGGASLKADAFAVIVKAA 249          
The following BLAST results are available for this feature:
BLAST of CK934058 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPIS_SALPA1.028e-4341.94Triosephosphate isomerase OS=Salmonella paratyphi ... [more]
TPIS_SALNS1.028e-4341.94Triosephosphate isomerase OS=Salmonella newport (s... [more]
TPIS_SALHS1.028e-4341.94Triosephosphate isomerase OS=Salmonella heidelberg... [more]
TPIS_SALG21.028e-4341.94Triosephosphate isomerase OS=Salmonella gallinarum... [more]
TPIS_SALEP1.028e-4341.94Triosephosphate isomerase OS=Salmonella enteritidi... [more]
TPIS_SALDC1.028e-4341.94Triosephosphate isomerase OS=Salmonella dublin (st... [more]
TPIS_SALCH1.028e-4341.94Triosephosphate isomerase OS=Salmonella choleraesu... [more]
TPIS_SALA41.028e-4341.94Triosephosphate isomerase OS=Salmonella agona (str... [more]
TPIS_FLAJ11.028e-4339.43Triosephosphate isomerase OS=Flavobacterium johnso... [more]
TPIS_ENT381.028e-4343.15Triosephosphate isomerase OS=Enterobacter sp. (str... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004541_H02 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_H02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934058 ID=CK934058; Name=CK934058; organism=Citrus sinensis; type=EST; length=844bp
GGGGACAAACAGGGTGTGAGAAAACAAACAGGGTGTTGATTTCTCGTATT
TTCGTCTCGCTTTCATCGCCAAACCAAACAAAATCCAATCGTCGTCATGG
CCCGCAAATTCTTCGTCGGCGGCAACTGGAAATGCAATGGGACATCTGAG
GAAGTGAAGAAGATTGTTTCTACATTGAATCAAGCTGAAGTTCCTTCTGA
GGATGTTGTGGAGGTTGTTGTAAGCCCTCCGTTTGTGTTTCTTCCTTTGG
TCAAGAGTGTGTTGCGGTCTGATTTCCATGTTGCTGCTCAAAATTGCTGG
GTTCGCAAAGGTGGTGCTTTTACCGGGGAAGTTAGTGCTGAGATGCTTGT
CAACTTGAGCATTCCTTGGGTCATTCTTGGTCATTCTGAAAGAAGAGCTC
TTTTGAATGAGTCAAATGATTTTGTTGGAGATAAAGTTGCTTATGCACTT
TCTCAAGGCTTGAAAGTCATTGCTTGTGTTGGAGAGACTCTGGAATAGCG
AGAATCAGGATCTACAGTGGCTGTTGTGGCTGAACAAACAAAAGCAATCG
CAGAAAAAATATCCAACTGGGACAATGTTGTGTTGGCTTATGAGCCAGTT
TGGGCCATTGGTACCGGGAAGGTTGCAACCCCTGCTCAGGCTCAGGAAGT
CCATGCTGAACTGAGGAAATGGCTTAAAGACAATGTCAGTGCTGAAGTTG
CAGCATCNNNNAGAATCATCTACGGAGGTTCTGTAAATGGAGCAAATTGC
AAAGAATTGGCAGCACAACCTGATGTGGATGGATTTTTGGTTGGTGGAGC
TTCTCTAAAGCCGGAGTTCATCGATATTATCAAGTCTGCCACAG
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