CK934058
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934058 vs. ExPASy Swiss-Prot
Match: TPIS_CYTH3 (Triosephosphate isomerase OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=tpiA PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 3.905e-43 Identity = 104/249 (41.77%), Postives = 139/249 (55.82%), Query Frame = 1 Query: 103 RKFFVGGNWKCNGTSEEVKKIVSTL-NQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLE*RESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASXRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKP-EFIDIIKS 837 RK + GNWK N T EE + S + N A+ V+ + AQN + ++ GAFTGE+SA ML ++ + +VI+GHSERR E+N + DKV +L+ GL + C GETL RE+G + V Q +S D VV+AYEP+WAIGTG A+ QAQE+HA++R+ L A VA I+YGGS+ N K L A D+DG L+GGASLK +FIDI KS Sbjct: 2 RKKVIAGNWKMNKTLEEGLSLASEVANMAKDEVPADVNLVMCIPYISLAAVSKVINDKVAIGAQNVYQKESGAFTGEISAPMLKSVGVKYVIIGHSERREYFGETNQQLADKVTISLANGLTPLFCCGETLAQREAGIHINFVNAQLTESLFHLSPEDFKKVVIAYEPIWAIGTGVTASDEQAQEMHAKIREHLASKYGAAVADEISILYGGSMKPDNAKGLLACKDIDGGLIGGASLKSRDFIDIAKS 250
BLAST of CK934058 vs. ExPASy Swiss-Prot
Match: TPIS_ALCBS (Triosephosphate isomerase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=tpiA PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 3.905e-43 Identity = 105/251 (41.83%), Postives = 147/251 (58.57%), Query Frame = 1 Query: 97 MARKFFVGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLE*RESGSTVAVVAEQTKAIAEK--ISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASXRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSA 840 M R V GNWK NG K +++ + A +S + + +QN ++ GAFTGEVSA ML + +VI+GHSERRAL E++ + K A+A + GL I CVGETLE R+SG+T +V Q +A+ + ++ + N ++AYEPVWAIGTGK A+P QAQ VHA LR++L + ++A S R++YGGSV N L AQ D+DG L+GGASL + FI I ++A Sbjct: 1 MNRTPLVAGNWKMNGR----KDLLTEMADALAGYAGAAEVVICPPFPYLAAARSAMPGAVGIGSQNVSEQEDGAFTGEVSAPMLAEVGCGYVIIGHSERRALYGETDAQIASKFAHAQAAGLVPILCVGETLEERDSGNTDTIVCGQLRAVVDAVGVAAFANAIVAYEPVWAIGTGKTASPEQAQAVHACLRQFLAKD-DPDIAQSLRLLYGGSVKADNAALLFAQSDIDGGLIGGASLTADSFIAICQAA 246
BLAST of CK934058 vs. ExPASy Swiss-Prot
Match: TPIS_THIDA (Triosephosphate isomerase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=tpiA PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 5.100e-43 Identity = 114/249 (45.78%), Postives = 141/249 (56.63%), Query Frame = 1 Query: 103 RKFFVGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLE*RESGSTVAVVAEQTKAI--AEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASXRIIYGGSVNGANCKELAAQPDVDGFLVGGAS-LKPEFIDIIKSA 840 RK V GNWK +G+ E +++ L A ++ S AQN GAFTGEVSA ML++ +VI+GHSERR+L ES+ V K A + GL I CVGE+L RESG T VVA Q A+ A I++ V+AYEPVWAIGTGK A+P QAQ VHA +R L D + A VAA I YGGSV AN EL AQPD+DG L+GGAS L EF+ I ++A Sbjct: 2 RKKLVAGNWKMHGSLAENAALLAALKPA---LQGIEAAVCVPFPYLAQVQTALAGSSLAWGAQNVSEHGKGAFTGEVSASMLLDFGCKYVIVGHSERRSLYGESDALVAAKYMAAQAAGLTPILCVGESLAERESGVTEQVVARQLDAVVAAAGIASLARAVVAYEPVWAIGTGKTASPEQAQAVHAFIRGKLAD-LDAAVAAGLIIQYGGSVKAANAAELMAQPDIDGGLIGGASLLADEFVAICRAA 246
BLAST of CK934058 vs. ExPASy Swiss-Prot
Match: TPIS_ACTPJ (Triosephosphate isomerase OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=tpiA PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 5.100e-43 Identity = 109/253 (43.08%), Postives = 144/253 (56.92%), Query Frame = 1 Query: 97 MARKFFVGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVA--AQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLE*RESGSTVAVVAEQTKAIAEK--ISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASXRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSA 840 MAR+ V GNWK NG+ K++++ L +AE ++ L +A AQN V GAFTG++S EML + ++I+GHSERR E + F+ K A + GL + C+GET E+G T AV A+Q A+ + + ++ V+AYEP+WAIGTGK ATPAQAQ VHA +R + S VA I YGGSVN AN EL QPD+DG LVGGASLK P F I+K+A Sbjct: 1 MARRPLVMGNWKLNGSKAFTKELIAGL-KAELADVKGCDVAIAPPVMYLAEAEAALAGQSVIALGAQNVDVNVQGAFTGDISTEMLKDFGAKYIIIGHSERRTYHKECDTFIAKKFAALKAAGLVPVLCIGETEAENEAGQTEAVCAKQIDAVIDALGVEAFNGAVIAYEPIWAIGTGKSATPAQAQAVHAFIRGHIAAK-SQAVADQVIIQYGGSVNDANAAELFTQPDIDGALVGGASLKAPAFAVIVKAA 251
BLAST of CK934058 vs. ExPASy Swiss-Prot
Match: TPIS_ACTP7 (Triosephosphate isomerase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=tpiA PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 5.100e-43 Identity = 109/253 (43.08%), Postives = 144/253 (56.92%), Query Frame = 1 Query: 97 MARKFFVGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVA--AQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLE*RESGSTVAVVAEQTKAIAEK--ISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASXRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSA 840 MAR+ V GNWK NG+ K++++ L +AE ++ L +A AQN V GAFTG++S EML + ++I+GHSERR E + F+ K A + GL + C+GET E+G T AV A+Q A+ + + ++ V+AYEP+WAIGTGK ATPAQAQ VHA +R + S VA I YGGSVN AN EL QPD+DG LVGGASLK P F I+K+A Sbjct: 1 MARRPLVMGNWKLNGSKAFTKELIAGL-KAELADVKGCDVAIAPPVMYLAEAEAALAGQSVIALGAQNVDVNVQGAFTGDISTEMLKDFGAKYIIIGHSERRTYHKECDTFIAKKFAALKAAGLVPVLCIGETEAENEAGQTEAVCAKQIDAVIDALGVEAFNGAVIAYEPIWAIGTGKSATPAQAQAVHAFIRGHIAAK-SQAVADQVIIQYGGSVNDANAAELFTQPDIDGALVGGASLKAPAFAVIVKAA 251
BLAST of CK934058 vs. ExPASy Swiss-Prot
Match: TPIS_ACTP2 (Triosephosphate isomerase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=tpiA PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 5.100e-43 Identity = 109/253 (43.08%), Postives = 144/253 (56.92%), Query Frame = 1 Query: 97 MARKFFVGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVA--AQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLE*RESGSTVAVVAEQTKAIAEK--ISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASXRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSA 840 MAR+ V GNWK NG+ K++++ L +AE ++ L +A AQN V GAFTG++S EML + ++I+GHSERR E + F+ K A + GL + C+GET E+G T AV A+Q A+ + + ++ V+AYEP+WAIGTGK ATPAQAQ VHA +R + S VA I YGGSVN AN EL QPD+DG LVGGASLK P F I+K+A Sbjct: 1 MARRPLVMGNWKLNGSKAFTKELIAGL-KAELADVKGCDVAIAPPVMYLAEAEAALAGQSVIALGAQNVDVNVQGAFTGDISTEMLKDFGAKYIIIGHSERRTYHKECDTFIAKKFAALKAAGLVPVLCIGETEAENEAGQTEAVCAKQIDAVIDALGVEAFNGAVIAYEPIWAIGTGKSATPAQAQAVHAFIRGHIAAK-SQAVADQVIIQYGGSVNDANAAELFTQPDIDGALVGGASLKAPAFAVIVKAA 251
BLAST of CK934058 vs. ExPASy Swiss-Prot
Match: TPIS_SHISS (Triosephosphate isomerase OS=Shigella sonnei (strain Ss046) GN=tpiA PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 6.661e-43 Identity = 104/245 (42.45%), Postives = 136/245 (55.51%), Query Frame = 1 Query: 115 VGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLE*RESGSTVAVVAEQTKAI--AEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASXRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSA 840 V GNWK NG+ V ++VS L + + S + AQN + GAFTGE SA ML ++ ++I+GHSERR ES++ + K A QGL + C+GET E+G T V A Q A+ + + ++ V+AYEPVWAIGTGK ATPAQAQ VH +R + V A +A I YGGSVN +N EL AQPD+DG LVGGASLK + F I+K+A Sbjct: 6 VMGNWKLNGSRHMVHELVSNLRKELAGVAGCAVAIAPPEMYIDMAKREAEGSHIMLGAQNVDLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHIA-KVDANIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAA 249
BLAST of CK934058 vs. ExPASy Swiss-Prot
Match: TPIS_SHIFL (Triosephosphate isomerase OS=Shigella flexneri GN=tpiA PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 6.661e-43 Identity = 104/245 (42.45%), Postives = 136/245 (55.51%), Query Frame = 1 Query: 115 VGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLE*RESGSTVAVVAEQTKAI--AEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASXRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSA 840 V GNWK NG+ V ++VS L + + S + AQN + GAFTGE SA ML ++ ++I+GHSERR ES++ + K A QGL + C+GET E+G T V A Q A+ + + ++ V+AYEPVWAIGTGK ATPAQAQ VH +R + V A +A I YGGSVN +N EL AQPD+DG LVGGASLK + F I+K+A Sbjct: 6 VMGNWKLNGSRHMVHELVSNLRKELAGVAGCAVAIAPPEMYIDMAKREAEGSHIMLGAQNVDLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHIA-KVDANIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAA 249
BLAST of CK934058 vs. ExPASy Swiss-Prot
Match: TPIS_SHIF8 (Triosephosphate isomerase OS=Shigella flexneri serotype 5b (strain 8401) GN=tpiA PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 6.661e-43 Identity = 104/245 (42.45%), Postives = 136/245 (55.51%), Query Frame = 1 Query: 115 VGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLE*RESGSTVAVVAEQTKAI--AEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASXRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSA 840 V GNWK NG+ V ++VS L + + S + AQN + GAFTGE SA ML ++ ++I+GHSERR ES++ + K A QGL + C+GET E+G T V A Q A+ + + ++ V+AYEPVWAIGTGK ATPAQAQ VH +R + V A +A I YGGSVN +N EL AQPD+DG LVGGASLK + F I+K+A Sbjct: 6 VMGNWKLNGSRHMVHELVSNLRKELAGVAGCAVAIAPPEMYIDMAKREAEGSHIMLGAQNVDLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHIA-KVDANIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAA 249
BLAST of CK934058 vs. ExPASy Swiss-Prot
Match: TPIS_SHIDS (Triosephosphate isomerase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=tpiA PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 6.661e-43 Identity = 104/245 (42.45%), Postives = 136/245 (55.51%), Query Frame = 1 Query: 115 VGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLE*RESGSTVAVVAEQTKAI--AEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASXRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSA 840 V GNWK NG+ V ++VS L + + S + AQN + GAFTGE SA ML ++ ++I+GHSERR ES++ + K A QGL + C+GET E+G T V A Q A+ + + ++ V+AYEPVWAIGTGK ATPAQAQ VH +R + V A +A I YGGSVN +N EL AQPD+DG LVGGASLK + F I+K+A Sbjct: 6 VMGNWKLNGSRHMVHELVSNLRKELAGVAGCAVAIAPPEMYIDMAKREAEGSHIMLGAQNVDLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHIA-KVDANIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAA 249 The following BLAST results are available for this feature:
BLAST of CK934058 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK934058 ID=CK934058; Name=CK934058; organism=Citrus sinensis; type=EST; length=844bpback to top |