CK934058

Overview
NameCK934058
Unique NameCK934058
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length844
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934058 vs. ExPASy Swiss-Prot
Match: TPIS_STRP8 (Triosephosphate isomerase OS=Streptococcus pyogenes serotype M18 GN=tpiA PE=3 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 5.462e-37
Identity = 91/242 (37.60%), Postives = 124/242 (51.24%), Query Frame = 1
Query:   97 MARKFFVGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLE*RESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASXRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 816
            M+RK  + GNWK N   +E K  V  +                         ++   S   VAAQNC+    GAFTGE S ++L  +   +V++GHSERR   +E+++ +  K     + GL  I C GE+LE  E+G     V  Q  A    +S     ++VLAYEP+WAIGTGK AT   AQ +   +R  +  +   EVA   R+ YGGSV   N K+  A PDVDG LVGGASL+ +
Sbjct:    1 MSRKPIIAGNWKMNKNPQEAKAFVEAVASKLPSTDLVDVAVAAPAVDLVTTIEAAKDSVLKVAAQNCYFENTGAFTGETSPKVLAEMGADYVVIGHSERRDYFHETDEDINKKAKAIFANGLTPIICCGESLETYEAGKAAEFVGAQVSAALAGLSAEQVASLVLAYEPIWAIGTGKSATQDDAQNMCKAVRDVVAADFGQEVADKVRVQYGGSVKPENVKDYMACPDVDGALVGGASLEAD 242          
BLAST of CK934058 vs. ExPASy Swiss-Prot
Match: TPIS_MYCGA (Triosephosphate isomerase OS=Mycoplasma gallisepticum GN=tpiA PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.462e-37
Identity = 95/247 (38.46%), Postives = 138/247 (55.87%), Query Frame = 1
Query:  106 KFFVGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLE*RESGSTVAVVAEQTKAIAEKISN--WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASXRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKP-EFIDIIKS 837
            K ++ GNWK   T++EVK+  S LNQ +                       + R++  V AQ+       A TG VS E L ++ + +VI+GHSERR L +ES++ +  KV   L   ++ I C+GETLE  E+  T AV+ +Q +   + I +    ++++AYEPVWAIGTGK A+   AQ+  A +R  L    S  +A    I+YGGSV   N  EL AQ D++G LVGGASL P +FI +I++
Sbjct:    5 KRYIFGNWKTYKTTQEVKEFFSVLNQTKLTKNPDVVFGVAPVFVHLGLANQLERNECLVLAQDANYVMNKANTGTVSYEQLKDIGVNYVIIGHSERRKLFHESDELINQKVKTLLENKMRPILCIGETLEEYEANKTKAVLKDQLEKDLKGIDSSLLKDLIIAYEPVWAIGTGKTASSQTAQDAIAYIRTVLGLLSSKTIANELPILYGGSVTPDNVSELLAQKDINGALVGGASLDPHKFIQLIEA 251          
BLAST of CK934058 vs. ExPASy Swiss-Prot
Match: TPIS1_LISMF (Triosephosphate isomerase 1 OS=Listeria monocytogenes serotype 4b (strain F2365) GN=tpiA1 PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.462e-37
Identity = 89/239 (37.24%), Postives = 126/239 (52.72%), Query Frame = 1
Query:  103 RKFFVGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLE*RESGSTVAVVAEQTKAIAEKISNWDNV--VLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASXRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKP 813
            RK  + GNWK N T+ +  +    +                         +    ++  VAAQNC+    GAFTGE+S   L +L + +VI+GHSERR   +E+++ +  K       G+  I C GETL+ RE+G T   V  Q +A    ++    +  V+AYEP+WAIGTGK +T A A E  A +R  + D VS + A + RI YGGSV   N  +  A+ D+DG LVGGASL+P
Sbjct:    2 RKPIIAGNWKMNKTAAKAGQFAEDVKNNVPSSDAVESVVAAPALFLQELVRLTEGTNLRVAAQNCYFEDEGAFTGEISPFALADLGVSYVIIGHSERREYFHETDEDINKKAHAIFKHGMTPIICCGETLDQREAGQTDTWVRGQIRAALAGLTEEQVIKSVIAYEPIWAIGTGKSSTSADANETCAVIRAEVADAVSQKAADAVRIQYGGSVKPENIADYLAESDIDGALVGGASLEP 240          
BLAST of CK934058 vs. ExPASy Swiss-Prot
Match: TPIS1_LISIN (Triosephosphate isomerase 1 OS=Listeria innocua GN=tpiA1 PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.462e-37
Identity = 89/239 (37.24%), Postives = 126/239 (52.72%), Query Frame = 1
Query:  103 RKFFVGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLE*RESGSTVAVVAEQTKAIAEKISNWDNV--VLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASXRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKP 813
            RK  + GNWK N T+ +  +    +                         +    ++  VAAQNC+    GAFTGE+S   L +L + +VI+GHSERR   +E+++ +  K       G+  I C GETL+ RE+G T   V  Q +A    ++    +  V+AYEP+WAIGTGK +T A A E  A +R  + D VS + A + RI YGGSV   N  +  A+ D+DG LVGGASL+P
Sbjct:    2 RKPIIAGNWKMNKTAAKAGQFAEDVKNNVPSSDAVESVVAAPALFLQELVRLTEGTNLRVAAQNCYFEDEGAFTGEISPFALADLGVSYVIIGHSERREYFHETDEDINKKAHAIFKHGMTPIICCGETLDQREAGQTDTWVRGQIRAALAGLTEEQVIKSVIAYEPIWAIGTGKSSTSADANETCAVIRAEVADAVSQKAADAVRIQYGGSVKPENIADYLAESDIDGALVGGASLEP 240          
BLAST of CK934058 vs. ExPASy Swiss-Prot
Match: TPIS_MYCMS (Triosephosphate isomerase OS=Mycoplasma mycoides subsp. mycoides SC GN=tpiA PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 7.133e-37
Identity = 90/237 (37.97%), Postives = 124/237 (52.32%), Query Frame = 1
Query:  103 RKFFVGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLE*RESGSTVAVVAEQTKAIAEKISNWDNV--VLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASXRIIYGGSVNGANCKELAAQPDVDGFLVGGASL 807
            +K  + GNWK NGT+E    +   LNQ +                        L  +  +AAQN   +  GA+TGE+S  ML  + + +VI+GHSERR + NE++  V  K    L   +  I C GETL+ +ESG T+  V  Q   + E I   D +  ++AYEP+WAIGTGK AT + A+EV  ++R  L        A    I YGGSV  +N +E    P++DG LVGGASL
Sbjct:    2 KKKVIFGNWKMNGTNES---LTDFLNQVDNKIDSSKIIAGLAVPYVMLQTGLKLAKNVKIAAQNVHYKDKGAYTGEISTTMLKEVGVEYVIIGHSERREMFNETDLDVNKKAKVLLENNITPIICCGETLQTKESGKTIEFVNNQINIMFEGIKKEDAIKAIIAYEPIWAIGTGKTATSSDAEEVCKQIRNNLSKIYDKNTAEQIIIQYGGSVKPSNIQEYLKMPNIDGALVGGASL 235          
BLAST of CK934058 vs. ExPASy Swiss-Prot
Match: TPIS_MYCMO (Triosephosphate isomerase OS=Mycoplasma mobile GN=tpiA PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 7.133e-37
Identity = 93/249 (37.35%), Postives = 130/249 (52.21%), Query Frame = 1
Query:  103 RKFFVGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLR----SDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLE*RESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASXRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIK 834
            RK  + GNWK N T  E +  V   N+                         + +    ++  +AAQN      GAFTGE+SAEML++L +  V+LGHSERR   +E+++ V  K+  A+   L  I CVGET     S  +  V+  Q +   + +S++  +++AYEP+WAIGTGK AT   AQE+   +R    +           I YGGSV   N KEL +Q D+DG LVGGASL   +FID+IK
Sbjct:    2 RKKIIIGNWKMNKTKTEAENFVKEFNKITSELNLKLDKNLVAGLALPFTSLGIKKEGNFANLVIAAQNFHQNNSGAFTGEISAEMLLDLGVKMVVLGHSERREFFHETDEIVNMKMHQAIKNNLVPIVCVGETELQYNSNKSKEVIKNQIEKSLKNLSDFSKIIIAYEPIWAIGTGKTATVEYAQEMCKYIRSLTNEKTI--------IQYGGSVKPNNIKELLSQKDIDGALVGGASLNVKDFIDLIK 242          
BLAST of CK934058 vs. ExPASy Swiss-Prot
Match: TPIS_MYCA9 (Triosephosphate isomerase OS=Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) GN=tpiA PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 7.133e-37
Identity = 99/246 (40.24%), Postives = 125/246 (50.81%), Query Frame = 1
Query:   97 MARKFFVGGNWKCNGTSEE----VKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLE*RESGSTVAVVAEQTKAIAEKIS--NWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASXRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 816
            M+RK  + GNWK N    E    V+KI  +L                             +      AQ+  V   GA+TGEVS   L  L + +V++GHSERR    E +  V  K A AL  GL  I C+GE L+ RE+G  V       +     +S      VV+AYEPVWAIGTG+VA+ A AQEV A +R  L    +A+VA S R++YGGS N  N  E+ AQ DVDG LVGGASL  E
Sbjct:    1 MSRKPLIAGNWKMNLNHFEAIALVQKIAFSLPDKYFDKVDVTVIPPFTDIRSVQTLVDGDKLRLTYGAQDLSVYDSGAYTGEVSGAFLAKLGVTYVVVGHSERRQYHGEDDALVAAKAAAALKHGLTPIVCIGEALDIREAGDHVQYNVNSLRGSLAGLSAEQVGKVVIAYEPVWAIGTGRVASAADAQEVCAAIRAELAQIANADVAGSVRVLYGGSANAKNVGEIVAQEDVDGALVGGASLDGE 246          
BLAST of CK934058 vs. ExPASy Swiss-Prot
Match: TPIS_LACSS (Triosephosphate isomerase OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=tpiA PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 7.133e-37
Identity = 88/246 (35.77%), Postives = 132/246 (53.66%), Query Frame = 1
Query:  103 RKFFVGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLE*RESGSTVAVVAEQTKAIAEKIS--NWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASXRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKP-EFIDII 831
            RK  + GNWK N    +  + V+ +                         ++   +D  VAA+NC+  + GAFTGE S + L  + + +VI+GHSERR   +E+++ +  K        +  I C GE+LE RE+G     V+ Q     + +S     ++V+AYEP+WAIGTGK A+  QAQE+ A +R+ +       VA   RI YGGSV  AN KE+  + D+DG LVGGAS++P  F+D++
Sbjct:    2 RKPIIAGNWKMNMNPTQTTEFVNAIKANLPKFDQTESVIGAPAVDLPALLEAAKGTDLKVAAENCYFEEAGAFTGETSPKTLNEMGVDYVIIGHSERRDYFHETDEDINKKAHAIFKNNMTPIFCCGESLETREAGKAEEWVSNQVTEGLKGLSADQVSSMVIAYEPIWAIGTGKTASADQAQEICAVVRQTVAKLYDQTVADKVRIQYGGSVKPANVKEIMGKEDIDGGLVGGASMEPASFLDLV 247          
BLAST of CK934058 vs. ExPASy Swiss-Prot
Match: TPIS_FRATM (Triosephosphate isomerase OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=tpiA PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 7.133e-37
Identity = 93/242 (38.43%), Postives = 135/242 (55.79%), Query Frame = 1
Query:  124 NWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLE*RESGSTVAVVAEQTKAIAEKIS--NWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASXRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKP-EFIDIIKSA 840
            NWK NG S  +K++ S ++Q +                      S L     V  QN      GA+TGE+SA ML ++   ++++GHSERR+L  ES++ V  K+   +   +  + C+GE+L+ R+SG    V+A Q   I E +S      VV+AYEPVWAIGTG VA+  Q QE H  +R  L   V  ++A + +I+YGGS+   N K++ + P+VDG L+GGASLK  EF +II  A
Sbjct:    8 NWKMNGNSTSIKELCSGISQVQYDTSRVAIAVFPSSVYVKEVI-SQLPEKVGVGLQNITFYDDGAYTGEISARMLEDIGCDYLLIGHSERRSLFAESDEDVFKKLNKIIDTTITPVVCIGESLDDRQSGKLKQVLATQLSLILENLSVEQLAKVVIAYEPVWAIGTGVVASLEQIQETHQFIRSLLA-KVDEKLAKNIKIVYGGSLKAENAKDILSLPNVDGGLIGGASLKAVEFNEIINQA 247          
BLAST of CK934058 vs. ExPASy Swiss-Prot
Match: TPIS_BIFLO (Triosephosphate isomerase OS=Bifidobacterium longum GN=tpiA PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 7.133e-37
Identity = 96/242 (39.67%), Postives = 128/242 (52.89%), Query Frame = 1
Query:  115 VGGNWKCNGTSEE----VKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVA--AQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLE*RESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASXRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 816
            V GNWK N    E    V+K+V  L  A                        V     HVA  AQ+  V   GAFTG+VSA+M+ +L   +VI+GHSERR    E +  + D+V   L+ G++ I CVGE+ E R  G  +     Q + +   ++      +++AYEPVWAIGTG VATP  AQ+    +R  LK     +V+ S RI+YGGSV   N  EL +QPDVDGFL+GGA+L  E
Sbjct:    9 VAGNWKMNFDHLEATYFVQKLVWLLRDAHFDFKRCEVALFPSFTSLRSVQVLVEADKLHVAYGAQSVSVTTQGAFTGDVSADMIAHLGCSYVIVGHSERRKYHPEDDANIVDQVRAVLAAGMQPILCVGESFEERRQGIELDFAVGQVRDVTRDLNEEQAAKLIVAYEPVWAIGTGMVATPQSAQDAANAIRNDLKTTFGTKVSDSVRILYGGSVTSKNAAELISQPDVDGFLIGGAALDVE 250          
The following BLAST results are available for this feature:
BLAST of CK934058 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPIS_STRP85.462e-3737.60Triosephosphate isomerase OS=Streptococcus pyogene... [more]
TPIS_MYCGA5.462e-3738.46Triosephosphate isomerase OS=Mycoplasma gallisepti... [more]
TPIS1_LISMF5.462e-3737.24Triosephosphate isomerase 1 OS=Listeria monocytoge... [more]
TPIS1_LISIN5.462e-3737.24Triosephosphate isomerase 1 OS=Listeria innocua GN... [more]
TPIS_MYCMS7.133e-3737.97Triosephosphate isomerase OS=Mycoplasma mycoides s... [more]
TPIS_MYCMO7.133e-3737.35Triosephosphate isomerase OS=Mycoplasma mobile GN=... [more]
TPIS_MYCA97.133e-3740.24Triosephosphate isomerase OS=Mycobacterium abscess... [more]
TPIS_LACSS7.133e-3735.77Triosephosphate isomerase OS=Lactobacillus sakei s... [more]
TPIS_FRATM7.133e-3738.43Triosephosphate isomerase OS=Francisella tularensi... [more]
TPIS_BIFLO7.133e-3739.67Triosephosphate isomerase OS=Bifidobacterium longu... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004541_H02 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_H02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934058 ID=CK934058; Name=CK934058; organism=Citrus sinensis; type=EST; length=844bp
GGGGACAAACAGGGTGTGAGAAAACAAACAGGGTGTTGATTTCTCGTATT
TTCGTCTCGCTTTCATCGCCAAACCAAACAAAATCCAATCGTCGTCATGG
CCCGCAAATTCTTCGTCGGCGGCAACTGGAAATGCAATGGGACATCTGAG
GAAGTGAAGAAGATTGTTTCTACATTGAATCAAGCTGAAGTTCCTTCTGA
GGATGTTGTGGAGGTTGTTGTAAGCCCTCCGTTTGTGTTTCTTCCTTTGG
TCAAGAGTGTGTTGCGGTCTGATTTCCATGTTGCTGCTCAAAATTGCTGG
GTTCGCAAAGGTGGTGCTTTTACCGGGGAAGTTAGTGCTGAGATGCTTGT
CAACTTGAGCATTCCTTGGGTCATTCTTGGTCATTCTGAAAGAAGAGCTC
TTTTGAATGAGTCAAATGATTTTGTTGGAGATAAAGTTGCTTATGCACTT
TCTCAAGGCTTGAAAGTCATTGCTTGTGTTGGAGAGACTCTGGAATAGCG
AGAATCAGGATCTACAGTGGCTGTTGTGGCTGAACAAACAAAAGCAATCG
CAGAAAAAATATCCAACTGGGACAATGTTGTGTTGGCTTATGAGCCAGTT
TGGGCCATTGGTACCGGGAAGGTTGCAACCCCTGCTCAGGCTCAGGAAGT
CCATGCTGAACTGAGGAAATGGCTTAAAGACAATGTCAGTGCTGAAGTTG
CAGCATCNNNNAGAATCATCTACGGAGGTTCTGTAAATGGAGCAAATTGC
AAAGAATTGGCAGCACAACCTGATGTGGATGGATTTTTGGTTGGTGGAGC
TTCTCTAAAGCCGGAGTTCATCGATATTATCAAGTCTGCCACAG
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