CK934058
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934058 vs. ExPASy Swiss-Prot
Match: TPIS_STRCO (Triosephosphate isomerase OS=Streptomyces coelicolor GN=tpiA PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 5.112e-35 Identity = 89/188 (47.34%), Postives = 116/188 (61.70%), Query Frame = 1 Query: 286 AQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLE*RESGS----TVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASXRIIYGGSVNGANCKELAAQPDVDGFLVGGASL-KPEFIDIIK 834 AQ+ GGA+TGE+S ML L +V +GHSERR E+++ V KV A GL I CVGE L+ RE+G+ T+A V K +A + + ++VV+AYEPVWAIGTGKV AQEV A +R L + S E+A RI YGGSV N E+ A+PD+DG LVGGASL EF+ I++ Sbjct: 69 AQDISAHDGGAYTGEISGPMLAKLKCTYVAVGHSERRQYHAETDEIVNAKVKAAYKHGLTPILCVGEELDVREAGNHVEHTLAQVEGGLKDLAAEQA--ESVVIAYEPVWAIGTGKVCGADDAQEVCAAIRGKLAELYSQELADKVRIQYGGSVKSGNVAEIMAKPDIDGALVGGASLDSDEFVKIVR 254
BLAST of CK934058 vs. ExPASy Swiss-Prot
Match: TPIS_BORHD (Triosephosphate isomerase OS=Borrelia hermsii (strain DAH) GN=tpiA PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 5.112e-35 Identity = 95/251 (37.85%), Postives = 130/251 (51.79%), Query Frame = 1 Query: 103 RKFFVGGNWKCNGTSEEV----KKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLK-VIACVGETLE*RESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASXRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDII 831 RK F+ GNWK + TS E K+IV + K S+ + AQN GA T E+S ML+ + +VILGHSE R L ++++ + K+ L K +I C+GETL RE+ T+ VV Q + +S D ++LAYEPVWAIGTGK AT +AQEVH +R ++ S A I YGGSVN N L + D+DG L+GGASLK + F++I+ Sbjct: 2 RKMFLAGNWKMHYTSVEAAGVAKQIVDGVQNINDDVVIMITPAFTSLCKVCEVTKG---SNVLLGAQNMSYENSGARTSEISPSMLLEFGVDYVILGHSECRTYLGDTDEVINKKILAGLKHPFKYLILCIGETLSERENNKTLDVVLNQIRRGLMSVSESDLKRIILAYEPVWAIGTGKTATKEEAQEVHRAIRLEIESLYSTSAADDIIIQYGGSVNVDNVGGLMGENDIDGALIGGASLKADSFLNIV 249
BLAST of CK934058 vs. ExPASy Swiss-Prot
Match: TPIS_SILST (Triosephosphate isomerase OS=Silicibacter sp. (strain TM1040) GN=tpiA PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 6.677e-35 Identity = 95/238 (39.92%), Postives = 123/238 (51.68%), Query Frame = 1 Query: 97 MARKFFVGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLE*RESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASXRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 810 MARK GNWK NGT E + ++ L Q + ++ D + Q+C + GA TG++SA+ML + +VI+GHSERRA E + V K A + GL + C+GETLE RE+G+T+ VV Q +N V+AYEPVWAIGTGKV T Q EVH LR L A ++YGGSV N E+ +VDG LVGGASLK Sbjct: 1 MARKL-AAGNWKMNGTGEHLAEL-ENLAQGDLPEGVDVLICPPATLISRAADRA---GDIAIGGQDCHAKTSGAHTGDLSADMLRDAGATYVIIGHSERRADHGEGDADVRAKTEAAQAAGLVAVVCIGETLEEREAGTTLEVVGAQLAGSLPDGVTAENTVVAYEPVWAIGTGKVPTLDQIAEVHDALRADLVARFGA-AGKDLPLLYGGSVKPGNAAEIFGVSNVDGALVGGASLK 232
BLAST of CK934058 vs. ExPASy Swiss-Prot
Match: TPIS_RALEH (Triosephosphate isomerase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=tpiA PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 6.677e-35 Identity = 88/177 (49.72%), Postives = 106/177 (59.89%), Query Frame = 1 Query: 286 AQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLE*RESGSTVAVVAEQTKAI--AEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASXRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 810 AQ+ GAFTGEVSA M+ +V++GHSERR E++ V K AL G+ + CVGETL RE+G T AVV Q +A+ A + VVLAYEPVWAIGTGK AT QAQ VHA LR + A VA I+YGGSV N EL + D+DG L+GGASLK Sbjct: 60 AQDVSAEARGAFTGEVSASMVGEFGCTYVLVGHSERRTYHGETDQTVAAKALRALEFGIVPVVCVGETLAQREAGETEAVVGRQLQAVLDALTVEQLSRVVLAYEPVWAIGTGKTATSEQAQAVHAFLRGQVAAR-DAGVAERMAILYGGSVKPDNAAELFSMTDIDGGLIGGASLK 235
BLAST of CK934058 vs. ExPASy Swiss-Prot
Match: TPIS_MYCGI (Triosephosphate isomerase OS=Mycobacterium gilvum (strain PYR-GCK) GN=tpiA PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 6.677e-35 Identity = 97/249 (38.96%), Postives = 125/249 (50.20%), Query Frame = 1 Query: 97 MARKFFVGGNWKCNGTSEE----VKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLE*RESGSTVAVVAEQTKAI-----AEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASXRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 816 M RK + GNWK N E V+KI +L + AQ+ GA+TGE+S L L + ++GHSERR E+++ V K AL GL I C+GE LE RE+G+ V + AE+I+ V+AYEPVWAIGTG+VA+ A AQEV +R L + SA+VAA R++YGGSVN N E+ Q DVDG LVGGASL E Sbjct: 1 MTRKPLIAGNWKMNLNHFEAIALVQKIAFSLPDKYFDRVDVTVIPPFTDLRSVQTLVDGDKLRLTYGAQDVSQHDSGAYTGEISGAFLAKLGCTFAVVGHSERRTYHGETDELVAAKATAALKHGLTPIVCIGEQLEVREAGNHVEFNVNSLRGSLAGLSAEQIAQ---TVIAYEPVWAIGTGRVASAADAQEVCKAIRDELGNLASADVAAGVRVLYGGSVNAKNVGEIVGQGDVDGALVGGASLDGE 246
BLAST of CK934058 vs. ExPASy Swiss-Prot
Match: TPIS_GRABC (Triosephosphate isomerase OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=tpiA PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 6.677e-35 Identity = 94/236 (39.83%), Postives = 120/236 (50.85%), Query Frame = 1 Query: 115 VGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLR-SDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLE*RESGSTVAVVAEQTK-AIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASXRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 816 + GNWK NG + ++ L A SVL S V AQ+C + + GA TG++SAEMLV WVILGHSERR E ++ V +KV A GL I CVGET + R SG +V Q K ++ + + N V+AYEPVWAIGTG+ AT +HA +R+ L E RI+YGGSV N L P+V G LVGGASL + Sbjct: 5 IAGNWKMNGLRSTSESLLQALRDAAPHALRNCDMLICPPATLIAQAASVLAGSGIEVGAQDCHMARSGAHTGDLSAEMLVEAGAHWVILGHSERRRDHGELSETVREKVIAARQFGLTPIVCVGETEDERASGRETEIVGWQIKGSLPDGFAADSNGVIAYEPVWAIGTGRTATVEDVAMMHAFIREELVRQF-GEAGRGVRILYGGSVKPENAASLLRVPEVGGALVGGASLSAQ 239
BLAST of CK934058 vs. ExPASy Swiss-Prot
Match: TPIS_SILPO (Triosephosphate isomerase OS=Silicibacter pomeroyi GN=tpiA PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 8.720e-35 Identity = 98/248 (39.52%), Postives = 124/248 (50.00%), Query Frame = 1 Query: 103 RKFFVGGNWKCNGTSEEVKKI--VSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLE*RESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASXRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKSA 840 R+ GNWK NGT + + ++ + A S +R + Q+C GA TG++SA ML + VILGHSERRA E++ V DK AL GL I C+GETL RE+G T+ VV Q + VV+AYEPVWAIGTG V T Q EVH LR+ L +E A + R++YGGSV N E+ A +VDG LVGGASL I SA Sbjct: 2 RRKLAAGNWKMNGTGAALDALEAIAGAHSAAAVDLLICPPATLLYRAAQVAEGSRVR----IGGQDCHAVTAGAHTGDISAMMLADAGASAVILGHSERRADHGETDAQVCDKARAALEAGLIAIICIGETLAQREAGQTLDVVCAQLAGSVPDGIDGTRVVVAYEPVWAIGTGLVPTLEQIAEVHDTLRQQLIGRFGSETAEAIRLLYGGSVKPGNAAEIFAVSNVDGALVGGASLTAADFSPIVSA 245
BLAST of CK934058 vs. ExPASy Swiss-Prot
Match: TPIS_RHOP5 (Triosephosphate isomerase OS=Rhodopseudomonas palustris (strain BisA53) GN=tpiA PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 8.720e-35 Identity = 92/239 (38.49%), Postives = 122/239 (51.05%), Query Frame = 1 Query: 100 ARKFFVGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRS--DFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLE*RESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASXRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 810 A + + GNWK NG ++ + + L A + + F V AQ+C GA TG++SAEMLV+ +I+GHSERRA E++ V K A G I CVGET R++G T+ VV Q + +N V+AYEPVWAIGTG T ++VH +R L E A+ RI+YGGSV +N KEL A P+V+G LVGGASLK Sbjct: 4 AIRALIAGNWKMNGLKAQLAEFEAMLAGAPALADKADLLVCPPATLLHAFGQKLGNGARSFAVGAQDCHANVSGAHTGDLSAEMLVDAGASAIIVGHSERRADHGETDSVVRAKAEAAWRAGAVAIVCVGETQAERDAGQTLDVVGRQLAGSLPDGATAENTVVAYEPVWAIGTGLTPTANDVEQVHKFIRDCLTKRFGGE-GAAVRILYGGSVKPSNAKELMAVPEVNGALVGGASLK 241
BLAST of CK934058 vs. ExPASy Swiss-Prot
Match: TPIS_NATTJ (Triosephosphate isomerase OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=tpiA PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 8.720e-35 Identity = 93/242 (38.43%), Postives = 132/242 (54.55%), Query Frame = 1 Query: 97 MARKFFVGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLE*RESGSTVAVVAEQTK-AIAEKISN-WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASXRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 816 MAR + GNWK N E ++ V+ + + + + AQN + + GAFTGEVS +ML L + +VI+GHSERR + ES++ V KV AL G+K I CVGE+ R G T+ VV Q K A++E +S+ NVV AYEPVWAIG+GK AT A++V +R + + +++ VA ++YGGSV N +E Q +++G LVGG SL E Sbjct: 1 MARTI-IAGNWKMNHGPRETREFVAGMKE-KYQTPPAVETVICPPFVSISDLVNESPEWLKTGAQNVYFEESGAFTGEVSPKMLAELGVEYVIIGHSERRNIFAESDEEVNKKVRIALKYGIKPIICVGESDAQRNEGKTLEVVENQVKSALSEVVSDTLQNVVFAYEPVWAIGSGKAATGEDAEQVCKHIRSVISE-LNSSVADDIPVLYGGSVKPENLEEFMDQDNINGALVGGKSLVAE 239
BLAST of CK934058 vs. ExPASy Swiss-Prot
Match: TPIS_MYCVP (Triosephosphate isomerase OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=tpiA PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 8.720e-35 Identity = 95/253 (37.55%), Postives = 125/253 (49.41%), Query Frame = 1 Query: 97 MARKFFVGGNWKCNGTSEE----VKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLE*RESGSTVAVVAEQTKAIAEKIS--NWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASXRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 837 M+RK + GNWK N E V+KI +L + AQ+ GA+TGE+S L L + ++GHSERR NE + V K A A GL I C+GE L+ RE+G+ V Q + +S V+AYEPVWAIGTG+VA+ A AQEV +R L + S E+AA R++YGGSVN N E+ Q DVDG LVGGASL E ++ + Sbjct: 1 MSRKPLIAGNWKMNLNHFEAIALVQKIAFSLPDKYFDKVDVTVIPPFTDLRSVQTLVDGDKLRLTYGAQDVSQHDSGAYTGEISGAFLAKLGCTFAVVGHSERRTYHNEDDALVAAKAAAAFKHGLTPIICIGEHLDVREAGNHVEYNVNQLRGSLAGLSAEQIGQAVIAYEPVWAIGTGRVASAADAQEVCKAIRDELGNLASPELAAGVRVLYGGSVNAKNVGEIVGQADVDGALVGGASLDGEQFSMLSA 253 The following BLAST results are available for this feature:
BLAST of CK934058 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934058 ID=CK934058; Name=CK934058; organism=Citrus sinensis; type=EST; length=844bpback to top |