CK934058

Overview
NameCK934058
Unique NameCK934058
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length844
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934058 vs. ExPASy Swiss-Prot
Match: TPI1_GIALA (Triosephosphate isomerase OS=Giardia lamblia PE=1 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.440e-53
Identity = 111/252 (44.05%), Postives = 155/252 (61.51%), Query Frame = 1
Query:  100 ARKFFVGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLE*RESGSTVAVVAEQTKAIAEKISN----WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASXRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKSAT 843
            AR+ F+GGN+KCNG+ + +K  V+ +  A                       +       +AAQN ++   GA+TGE S EML ++ +  VI+GHSERR ++ E+++    K   AL +G+ VI CVGETL+ R++  T+ V   Q +A+ +++      W  VV+AYEPVW+IGTG VATP QA+EVH  LRKW  + V AE A   RIIYGGS NG+NC++L   P++DGFLVGGASLKPEF+ +I   T
Sbjct:    3 ARRPFIGGNFKCNGSLDFIKSHVAAI-AAHKIPDSVDVVIAPSAVHLSTAIAANTSKQLRIAAQNVYLEGNGAWTGETSVEMLQDMGLKHVIVGHSERRRIMGETDEQSAKKAKRALEKGMTVIFCVGETLDERKANRTMEVNIAQLEALGKELGESKMLWKEVVIAYEPVWSIGTGVVATPEQAEEVHVGLRKWFAEKVCAEGAQHIRIIYGGSANGSNCEKLGQCPNIDGFLVGGASLKPEFMTMIDILT 253          
BLAST of CK934058 vs. ExPASy Swiss-Prot
Match: TPIS_CHLT3 (Triosephosphate isomerase OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=tpiA PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 5.626e-50
Identity = 121/250 (48.40%), Postives = 147/250 (58.80%), Query Frame = 1
Query:  103 RKFFVGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVL-RSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLE*RESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASXRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSA 840
            RK FV GNWK N        + + + Q                         V+  S   +AAQNC+    GA+TGE+SA ML N    +VILGHSERR   NE+++ V  KV  ALS  L VI CVGETLE RESG T +VV  Q +   + ++  D  +VV+AYEPVWAIGTGK ATP QAQEVHA +R  +KD    EVA   RI YGGSV  +N KEL   PD+DG L+GGASL  E F++IIKSA
Sbjct:    2 RKKFVAGNWKMNKDLLGAVSLATEILQLLGDEAPTCEVAIAPTFLCQQAVFQVIDESAIKLAAQNCFYEDQGAYTGEISAAMLRNSGCEYVILGHSERRQYFNETDEIVNKKVKNALSVELDVIMCVGETLEQRESGVTKSVVETQVRGGLKDLTAEDMKSVVIAYEPVWAIGTGKTATPEQAQEVHAFIRGIVKDMFGEEVANELRIQYGGSVKTSNAKELFGMPDIDGGLIGGASLNAEDFVEIIKSA 251          
BLAST of CK934058 vs. ExPASy Swiss-Prot
Match: TPIS_PROA2 (Triosephosphate isomerase OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=tpiA PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.532e-47
Identity = 113/248 (45.56%), Postives = 141/248 (56.85%), Query Frame = 1
Query:  103 RKFFVGGNWKCNGTSEEVKKIVSTL-NQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLE*RESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASXRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSA 840
            RK  V GNWK N T  E  ++ S + +Q                         +  +  H+AAQNC     GAFTGEVS  ML      +VI+GHSERR    ++N  V  KV  ALS GL VI CVGETL+ RE G T  VV  Q K   E +++  ++V+AYEPVWAIGTGK A+  QAQEVHA +R  +    S   AA  RI YGGSV  +N +EL A PD+DG L+GGASL  E F+ I+K+A
Sbjct:    2 RKKIVVGNWKMNKTIAEAVELSSAIIDQLGEVSASCEVGIAPAFPALSGVHGVISGTGIHLAAQNCHYEDDGAFTGEVSVRMLDEAGCSYVIVGHSERRQYFGDTNPVVNLKVKKALSAGLNVILCVGETLDEREKGITTEVVTCQVKEGLEGVADIGDIVIAYEPVWAIGTGKTASSLQAQEVHASIRATVAGLYSEPAAAGVRIQYGGSVKPSNAEELFAMPDIDGGLIGGASLNAEDFVAIVKAA 249          
BLAST of CK934058 vs. ExPASy Swiss-Prot
Match: TPIS_CHLP8 (Triosephosphate isomerase OS=Chlorobaculum parvum (strain NCIB 8327) GN=tpiA PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 2.001e-47
Identity = 110/248 (44.35%), Postives = 142/248 (57.26%), Query Frame = 1
Query:  103 RKFFVGGNWKCNGT-SEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLE*RESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASXRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSA 840
            R+  V GNWK N T +E ++   +   +                       K++  S   +AAQNC     GAFTGEVS  ML      +VILGHSERR L  E+N+ V  KV  AL++GL+VI CVGETL+ RE+G T  +V  Q       +S+   +V+AYEPVWAIGTGK AT  QAQ+VHA +R  ++       A   RI YGGSV  +N  EL A PD+DG L+GGASLK E F+ II++A
Sbjct:    2 RRTIVVGNWKMNNTIAESIELATAIAEKVGATKPECEVGIAPTFPALHEVGKTIEWSGVQLAAQNCHYENDGAFTGEVSTRMLAAAGCSYVILGHSERRQLFGETNEIVNRKVKKALAEGLRVILCVGETLDEREAGVTDKIVTAQVVEGLADVSDISTLVIAYEPVWAIGTGKTATKEQAQDVHASIRSTIEKLYGDSAARHLRIQYGGSVKPSNAAELFAMPDIDGGLIGGASLKVEDFMAIIEAA 249          
BLAST of CK934058 vs. ExPASy Swiss-Prot
Match: TPIS_PELCD (Triosephosphate isomerase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=tpiA PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 5.822e-47
Identity = 107/247 (43.32%), Postives = 141/247 (57.09%), Query Frame = 1
Query:  103 RKFFVGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLE*RESGSTVAVVAEQTKAIAEKI--SNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASXRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIK 834
            R+ F+ GNWK + TS E   +V  L  A                       ++ +SD  VAAQNC+    GAFTGEVS  +L +    +VI+GHSERR L  ES+ F+  KV   +  GL  I C+GETLE RE+  T  V+  Q +   E +  +  + +V+AYEPVWAIGTGK AT +QAQ+ H+ +R  + D   ++VA   RI+YGGSV   N   L  QPD+DG LVGGASL  E FI I+K
Sbjct:    2 RRPFIAGNWKLHKTSAEAAALVGELKGALSDVVDRDIVVAPVFTSLAAVIATLEKSDISVAAQNCYPENQGAFTGEVSPALLKDAGCRYVIVGHSERRQLFAESDAFINRKVKAVIDAGLSAILCIGETLEEREADKTFDVLERQVRCGLEGLDAAAMEQIVVAYEPVWAIGTGKTATDSQAQQAHSFIRSLVNDIFGSKVAQQVRIVYGGSVKPGNVDGLLQQPDIDGALVGGASLNAEDFIRIVK 248          
BLAST of CK934058 vs. ExPASy Swiss-Prot
Match: PGKT_THEMA (Bifunctional PGK/TIM OS=Thermotoga maritima GN=pgk/tpi PE=1 SV=4)

HSP 1 Score: 187.193 bits (474), Expect = 9.931e-47
Identity = 106/248 (42.74%), Postives = 139/248 (56.05%), Query Frame = 1
Query:   97 MARKFFVGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLE*RESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASXRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIK 834
            + RK  + GNWK + T  E KK VS L                         + +   +  + AQN +    GAFTGE+S  ML  + + +VI+GHSERR +  E ++F+  KV   L +G+  I CVGETLE RE G T  VV +Q +     +   +   VV+AYEPVWAIGTG+VATP QAQEVHA +RK L +    E A S RI+YGGS+   N   L  Q D+DG LVGGASLK  FI++ +
Sbjct:  400 ITRKLILAGNWKMHKTISEAKKFVSLLVNELHDVKEFEIVVCPPFTALSEVGEILSGRNIKLGAQNVFYEDQGAFTGEISPLMLQEIGVEYVIVGHSERRRIFKEDDEFINRKVKAVLEKGMTPILCVGETLEEREKGLTFCVVEKQVREGFYGLDKEEAKRVVIAYEPVWAIGTGRVATPQQAQEVHAFIRKLLSEMYDEETAGSIRILYGGSIKPDNFLGLIVQKDIDGGLVGGASLKESFIELAR 647          
BLAST of CK934058 vs. ExPASy Swiss-Prot
Match: TPIS_HAHCH (Triosephosphate isomerase OS=Hahella chejuensis (strain KCTC 2396) GN=tpiA PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.694e-46
Identity = 107/247 (43.32%), Postives = 144/247 (58.30%), Query Frame = 1
Query:  103 RKFFVGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLE*RESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASXRIIYGGSVNGANCKELAAQPDVDGFLVGGASL-KPEFIDIIKSA 840
            RK  + GNWK NG+ E  K ++  +  A+                      +V  S   + +QNC   + GA+TGEVSA+M  ++   WVILGHSERRAL  E+++ +  KV  A+  GL  I CVGETL  RESG    V  +Q  A+   +   D+ V+AYEPVWAIGTGK A+P  AQ +H  LR  ++ +   ++A   RI+YGGSV  +N KEL + PDVDG LVGGASL   EF+ II++A
Sbjct:    2 RKKLIAGNWKSNGSLERNKALLEGIVNAKALGSVDVVVCPPFPYLQSVE-SAVSDSMIELGSQNCSATEDGAYTGEVSAKMCADMKCSWVILGHSERRALYAENDEVIACKVKRAVESGLAPILCVGETLADRESGRAEEVTLKQLDAVFMSVQPDDSWVVAYEPVWAIGTGKTASPEDAQSMHKALRNNIRKHF-PQIADKIRILYGGSVKSSNAKELFSMPDVDGALVGGASLVSEEFVSIIEAA 246          
BLAST of CK934058 vs. ExPASy Swiss-Prot
Match: TPIS_COLP3 (Triosephosphate isomerase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=tpiA PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 3.774e-46
Identity = 111/253 (43.87%), Postives = 147/253 (58.10%), Query Frame = 1
Query:   97 MARKFFVGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXK---SVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLE*RESGSTVAVVAEQTKAIAEK--ISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASXRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKSA 840
            M R+  V  NWK NG S  V  +VS L   E                     K   + L    HV +QN    + GA+TGEVS  ML NL+I +VI+GHSERR++  E++  V  KV  AL+ GL  I C+GE+   R +G T  V++ Q + + ++  I  + +VV+AYEPVWAIGTGK A+ A AQE H  +RK+L    + +VA    ++YGGSVN ANC+EL AQ D+DG L+GGASLK E   II SA
Sbjct:    1 MTRQAIVAANWKMNGDSALVDTMVSGLADIELSSHVDVVICPSFPYLSELNQKIKAANLNEAIHVGSQNVSEHESGAYTGEVSTAMLQNLAINYVIVGHSERRSIFKETSTQVAKKVHAALNAGLTPILCIGESEAERATGETETVLSAQIQPVIDEIGIEKFKDVVIAYEPVWAIGTGKTASSAMAQETHQFIRKFLAQQ-NEQVADKVPLLYGGSVNAANCEELFAQTDIDGGLIGGASLKAEQFKIICSA 252          
BLAST of CK934058 vs. ExPASy Swiss-Prot
Match: TPIS_MAGSM (Triosephosphate isomerase OS=Magnetococcus sp. (strain MC-1) GN=tpiA PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.873e-45
Identity = 108/253 (42.69%), Postives = 143/253 (56.52%), Query Frame = 1
Query:  103 RKFFVGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLR-SDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLE*RESGSTVAVVAEQTKA----IAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASXRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKP-EFIDIIKSAT 843
            R+  + GNWK NGT++    + + +                         + V+  S   + AQN  V   GAFTGE+S EML ++   +VILGHSERR L  E+N+ V  KVA A   GL  I CVGETLE RE+  T+ V+ +Q  A    +    +    +V+AYEPVWAIGTGKVA+ AQAQE HA +R  L   + A VA + RI+YGGS+   N KEL  Q DVDG L+GGA+LK  +F+ I+   T
Sbjct:    2 RRALIAGNWKLNGTTQAATALATAVRDGVAANKPDCDVLVCPTFTVLSAVQGVVAGSGVDLGAQNMAVASSGAFTGEISGEMLKDVGCSYVILGHSERRTLFGETNEQVAQKVASAYRDGLTPILCVGETLEQREAEQTMQVLEQQLLACLPVLPADAAKQQQLVVAYEPVWAIGTGKVASTAQAQEAHAFIRGLLAKELGANVADAVRILYGGSMKPDNAKELLGQADVDGGLIGGAALKANDFLAIMDGLT 254          
BLAST of CK934058 vs. ExPASy Swiss-Prot
Match: TPIS_CHLPD (Triosephosphate isomerase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=tpiA PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.446e-45
Identity = 109/247 (44.13%), Postives = 135/247 (54.66%), Query Frame = 1
Query:  103 RKFFVGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLE*RESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASXRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSA 840
            RK  V GNWK N T  E   + + +  A                        +  S   + AQNC     GAFTGEVSA M+       VI GHSERR    E+N  V  KV +ALS+GL+VI C GETLE RE G T  VV  Q +     I +  N+V+AYEPVWAIGTGK AT  QA+EVH  +R  + D    E A   RI YGGSV  +N KEL + P++DG L+GGASL   +F+ I+K+A
Sbjct:    2 RKKIVVGNWKMNKTVTESLVLAAEVTAALGEGFTGCDVGIAPPFTALYEVGKLTGSRLALVAQNCHFEPDGAFTGEVSASMVREAGCSAVIAGHSERRHCFGETNAIVNRKVKHALSEGLQVIMCAGETLEQREGGVTGDVVTAQVREGLLGIDDISNIVIAYEPVWAIGTGKTATSEQAEEVHLLIRNTVSDLFGEEAAGRLRIQYGGSVKPSNAKELFSMPNIDGGLIGGASLNAADFVAIVKAA 248          
The following BLAST results are available for this feature:
BLAST of CK934058 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPI1_GIALA2.440e-5344.05Triosephosphate isomerase OS=Giardia lamblia PE=1 ... [more]
TPIS_CHLT35.626e-5048.40Triosephosphate isomerase OS=Chloroherpeton thalas... [more]
TPIS_PROA21.532e-4745.56Triosephosphate isomerase OS=Prosthecochloris aest... [more]
TPIS_CHLP82.001e-4744.35Triosephosphate isomerase OS=Chlorobaculum parvum ... [more]
TPIS_PELCD5.822e-4743.32Triosephosphate isomerase OS=Pelobacter carbinolic... [more]
PGKT_THEMA9.931e-4742.74Bifunctional PGK/TIM OS=Thermotoga maritima GN=pgk... [more]
TPIS_HAHCH1.694e-4643.32Triosephosphate isomerase OS=Hahella chejuensis (s... [more]
TPIS_COLP33.774e-4643.87Triosephosphate isomerase OS=Colwellia psychreryth... [more]
TPIS_MAGSM1.873e-4542.69Triosephosphate isomerase OS=Magnetococcus sp. (st... [more]
TPIS_CHLPD2.446e-4544.13Triosephosphate isomerase OS=Chlorobium phaeobacte... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004541_H02 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_H02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934058 ID=CK934058; Name=CK934058; organism=Citrus sinensis; type=EST; length=844bp
GGGGACAAACAGGGTGTGAGAAAACAAACAGGGTGTTGATTTCTCGTATT
TTCGTCTCGCTTTCATCGCCAAACCAAACAAAATCCAATCGTCGTCATGG
CCCGCAAATTCTTCGTCGGCGGCAACTGGAAATGCAATGGGACATCTGAG
GAAGTGAAGAAGATTGTTTCTACATTGAATCAAGCTGAAGTTCCTTCTGA
GGATGTTGTGGAGGTTGTTGTAAGCCCTCCGTTTGTGTTTCTTCCTTTGG
TCAAGAGTGTGTTGCGGTCTGATTTCCATGTTGCTGCTCAAAATTGCTGG
GTTCGCAAAGGTGGTGCTTTTACCGGGGAAGTTAGTGCTGAGATGCTTGT
CAACTTGAGCATTCCTTGGGTCATTCTTGGTCATTCTGAAAGAAGAGCTC
TTTTGAATGAGTCAAATGATTTTGTTGGAGATAAAGTTGCTTATGCACTT
TCTCAAGGCTTGAAAGTCATTGCTTGTGTTGGAGAGACTCTGGAATAGCG
AGAATCAGGATCTACAGTGGCTGTTGTGGCTGAACAAACAAAAGCAATCG
CAGAAAAAATATCCAACTGGGACAATGTTGTGTTGGCTTATGAGCCAGTT
TGGGCCATTGGTACCGGGAAGGTTGCAACCCCTGCTCAGGCTCAGGAAGT
CCATGCTGAACTGAGGAAATGGCTTAAAGACAATGTCAGTGCTGAAGTTG
CAGCATCNNNNAGAATCATCTACGGAGGTTCTGTAAATGGAGCAAATTGC
AAAGAATTGGCAGCACAACCTGATGTGGATGGATTTTTGGTTGGTGGAGC
TTCTCTAAAGCCGGAGTTCATCGATATTATCAAGTCTGCCACAG
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