CK934072

Overview
NameCK934072
Unique NameCK934072
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length544
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_ANAVT (S-adenosylmethionine synthetase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=metK PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.050e-24
Identity = 59/111 (53.15%), Postives = 75/111 (67.57%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMI-----AINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            TKVDRS AY  R  AK+IVA+GLA +C VQ+SYAIGV  P+S+F+DT+ TGK+ D+ +L +VK+NF+ RP  I       NL  +RGG   +   AAYGH GR D D  WE
Sbjct:  290 TKVDRSAAYAARYVAKNIVAAGLAEKCEVQLSYAIGVARPVSIFLDTFGTGKVDDEILLGLVKDNFELRPAGIIHSFNLRNLPSERGGRF-YQDVAAYGHLGRNDLDLPWE 399          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_HAHCH (S-adenosylmethionine synthetase OS=Hahella chejuensis (strain KCTC 2396) GN=metK PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.372e-24
Identity = 59/106 (55.66%), Postives = 74/106 (69.81%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVASGLA +C +QVSYAIGV EP S+ V+T+ TGKI D +I  +V+E+FD RP  +   LDLKR     +  TA+YGHFGR    F+WE
Sbjct:  270 SKVDRSAAYAGRYVAKNIVASGLAAKCEIQVSYAIGVSEPTSISVNTFGTGKISDDKIATLVREHFDLRPRGLIDMLDLKR---PIYRPTASYGHFGRTGDSFSWE 372          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_DESOH (S-adenosylmethionine synthetase OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=metK PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.372e-24
Identity = 59/106 (55.66%), Postives = 74/106 (69.81%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS +Y+ R  AK+IVA+G+A+RC VQV+YAIGV +P+SV VD   TG+IP+ +  RIV+E FD RP  I   LDLKR     +  TAAYGHFGR    F WE
Sbjct:  272 SKVDRSASYMGRHVAKNIVAAGIAKRCEVQVAYAIGVAQPVSVMVDLMGTGRIPEADAERIVREVFDLRPAAIIDYLDLKR---PIYGPTAAYGHFGRTGDSFPWE 374          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_CLAM3 (S-adenosylmethionine synthetase OS=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) GN=metK PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.372e-24
Identity = 56/108 (51.85%), Postives = 75/108 (69.44%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVV 324
            +KVDRS AY +R  AK+ VA+GLA R  VQV+YAIG   P+ ++V+T+ T  +P++ I+R ++E FD RP  I   LDL R     + +TAAYGHFGRE PDFTWE +
Sbjct:  287 SKVDRSAAYAMRWVAKNAVAAGLADRLEVQVAYAIGKAAPVGLYVETFGTAHVPEERIVRAIRETFDLRPAAIVERLDLLR---PIYAQTAAYGHFGRELPDFTWEAL 391          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_BACLD (S-adenosylmethionine synthetase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=metK PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.372e-24
Identity = 56/106 (52.83%), Postives = 75/106 (70.75%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            TKVDRS AY  R  AK+IVA+GLA  C VQ++YAIGV +P+S+ +DT+ TGK  ++ ++ +V++NFD RP  I   LDL+R     + +TAAYGHFGR D D  WE
Sbjct:  283 TKVDRSAAYAARYVAKNIVAAGLADSCEVQLAYAIGVAQPVSISIDTFGTGKASEETLIEVVRKNFDLRPAGIIKMLDLRR---PIYKQTAAYGHFGRLDLDLPWE 385          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_BACCZ (S-adenosylmethionine synthetase OS=Bacillus cereus (strain ZK / E33L) GN=metK PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.372e-24
Identity = 56/106 (52.83%), Postives = 75/106 (70.75%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            TKVDRS AY  R  AK+IVA+GLA +  VQ++YAIGV +P+S+ VDT+ TGK+ +  ++ +V+ NFD RP  I   LDL+R     + +TAAYGHFGR D D +WE
Sbjct:  283 TKVDRSAAYAARYVAKNIVAAGLAEKAEVQLAYAIGVAQPVSISVDTFGTGKVSEDVLVELVRNNFDLRPAGIIKMLDLRR---PIYKQTAAYGHFGRTDVDLSWE 385          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_BACCR (S-adenosylmethionine synthetase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=metK PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.372e-24
Identity = 56/106 (52.83%), Postives = 75/106 (70.75%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            TKVDRS AY  R  AK+IVA+GLA +  VQ++YAIGV +P+S+ VDT+ TGK+ +  ++ +V+ NFD RP  I   LDL+R     + +TAAYGHFGR D D +WE
Sbjct:  283 TKVDRSAAYAARYVAKNIVAAGLAEKAEVQLAYAIGVAQPVSISVDTFGTGKVSEDVLVELVRNNFDLRPAGIIKMLDLRR---PIYKQTAAYGHFGRTDVDLSWE 385          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_BACCQ (S-adenosylmethionine synthetase OS=Bacillus cereus (strain Q1) GN=metK PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.372e-24
Identity = 56/106 (52.83%), Postives = 75/106 (70.75%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            TKVDRS AY  R  AK+IVA+GLA +  VQ++YAIGV +P+S+ VDT+ TGK+ +  ++ +V+ NFD RP  I   LDL+R     + +TAAYGHFGR D D +WE
Sbjct:  283 TKVDRSAAYAARYVAKNIVAAGLAEKAEVQLAYAIGVAQPVSISVDTFGTGKVSEDVLVELVRNNFDLRPAGIIKMLDLRR---PIYKQTAAYGHFGRTDVDLSWE 385          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_BACC4 (S-adenosylmethionine synthetase OS=Bacillus cereus (strain B4264) GN=metK PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.372e-24
Identity = 56/106 (52.83%), Postives = 75/106 (70.75%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            TKVDRS AY  R  AK+IVA+GLA +  VQ++YAIGV +P+S+ VDT+ TGK+ +  ++ +V+ NFD RP  I   LDL+R     + +TAAYGHFGR D D +WE
Sbjct:  283 TKVDRSAAYAARYVAKNIVAAGLAEKAEVQLAYAIGVAQPVSISVDTFGTGKVSEDVLVELVRNNFDLRPAGIIKMLDLRR---PIYKQTAAYGHFGRTDVDLSWE 385          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_BACC3 (S-adenosylmethionine synthetase OS=Bacillus cereus (strain 03BB102) GN=metK PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.372e-24
Identity = 56/106 (52.83%), Postives = 75/106 (70.75%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            TKVDRS AY  R  AK+IVA+GLA +  VQ++YAIGV +P+S+ VDT+ TGK+ +  ++ +V+ NFD RP  I   LDL+R     + +TAAYGHFGR D D +WE
Sbjct:  283 TKVDRSAAYAARYVAKNIVAAGLAEKAEVQLAYAIGVAQPVSISVDTFGTGKVSEDVLVELVRNNFDLRPAGIIKMLDLRR---PIYKQTAAYGHFGRTDVDLSWE 385          
The following BLAST results are available for this feature:
BLAST of CK934072 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_ANAVT1.050e-2453.15S-adenosylmethionine synthetase OS=Anabaena variab... [more]
METK_HAHCH1.372e-2455.66S-adenosylmethionine synthetase OS=Hahella chejuen... [more]
METK_DESOH1.372e-2455.66S-adenosylmethionine synthetase OS=Desulfococcus o... [more]
METK_CLAM31.372e-2451.85S-adenosylmethionine synthetase OS=Clavibacter mic... [more]
METK_BACLD1.372e-2452.83S-adenosylmethionine synthetase OS=Bacillus lichen... [more]
METK_BACCZ1.372e-2452.83S-adenosylmethionine synthetase OS=Bacillus cereus... [more]
METK_BACCR1.372e-2452.83S-adenosylmethionine synthetase OS=Bacillus cereus... [more]
METK_BACCQ1.372e-2452.83S-adenosylmethionine synthetase OS=Bacillus cereus... [more]
METK_BACC41.372e-2452.83S-adenosylmethionine synthetase OS=Bacillus cereus... [more]
METK_BACC31.372e-2452.83S-adenosylmethionine synthetase OS=Bacillus cereus... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004541_G09 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_G09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934072 ID=CK934072; Name=CK934072; organism=Citrus sinensis; type=EST; length=544bp
ACCAAGGTTGATAGAAGTGGTGCTTACATTGTGAGGCAGGCAGCAAAGAG
CATCGTTGCCAGTGGCCTTGCTCGCCGCTGCATTGTGCAGGTTTCTTATG
CTATTGGTGTCCCAGAGCCCCTTTCAGTGTTTGTTGACACTTATCGAACT
GGAAAGATTCCGGACAAGGAGATCCTGAGGATTGTGAAGGAGAACTTTGA
TTTCAGGCCTGGAATGATTGCCATTAACTTGGATCTCAAGAGGGGAGGAA
ATAGCAGGTTTTTGAAGACTGCTGCATATGGGCATTTTGGAAGGGAGGAT
CCTGACTTCACATGGGAGGTGGTGAAGCCCCTCAAGTATGAGAAACCCCA
AGAGTAGTATTTAAGTATGCAGTTTCATTCTTTGTTTGAACTTAATAATT
TACTTGTTCTTTCGTCTGCCTGTCAGATTCTGTCTTTTTTCTCTCTTGGT
CTTGGCCTTTTTTTTTATAAATAAATTTGTATTATCTTTGCCATAATAGA
AAGATATATGTGGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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