CK934097
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934097 vs. ExPASy Swiss-Prot
Match: MDHB_DICDI (Probable malate dehydrogenase 2, mitochondrial OS=Dictyostelium discoideum GN=mdhB PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.893e-22 Identity = 56/130 (43.08%), Postives = 74/130 (56.92%), Query Frame = 1 Query: 4 DVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRN-GEWTIVQGLSIDEFSRKKLDLTAEELSEE 390 D+N TV K + + + D W+ FI TVQQRGAAII AR DH+RDW GT G W SM +YS+G Y GL +SFPV N G++ IV+GL +D+FS+++ D T +EL E Sbjct: 215 DINFGTVKG----KSLVDTINDQKWVKDNFIPTVQQRGAAIIAARGLSSAASAASAAIDHMRDWTYGT-NGQWTSMAIYSEGEYGADKGLYFSFPVIVDNKGKYEIVKGLKLDQFSQERFDATRKELLSE 339
BLAST of CK934097 vs. ExPASy Swiss-Prot
Match: MDH_MYCVP (Malate dehydrogenase OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=mdh PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.347e-22 Identity = 54/130 (41.54%), Postives = 71/130 (54.62%), Query Frame = 1 Query: 4 DVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 393 D+ HA V +G + D WL +FI TV +RG AII+AR DHI DWV GTP+G W S+ + S G+Y V GL+ SFP G W IV+GL I+ FSR ++D + EL E+ Sbjct: 198 DIFHAVVGGRSGA----DYAADTRWLTDDFIPTVARRGTAIIEARGASSAASAANGAIDHIDDWVHGTPDGDWTSVALPSPGAYGVDEGLVCSFPCRSVGGRWEIVEGLDINPFSRARIDASVAELRTER 323
BLAST of CK934097 vs. ExPASy Swiss-Prot
Match: MDH2_BURTA (Malate dehydrogenase 2 OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=mdh2 PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.424e-21 Identity = 52/129 (40.31%), Postives = 74/129 (57.36%), Query Frame = 1 Query: 4 DVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEE 390 D HA + G + V++L+ D+ W FI V QRG AII+AR D +RDW+ G+ +G WVSM V SDGSY + GL++ PV C G + V+ + ID F+R+++DL+ EL EE Sbjct: 195 DYRHARI----GRRLVKDLINDENWYRESFIPKVAQRGTAIIEARGASSAASAANAAIDQMRDWIFGS-DGRWVSMSVPSDGSYGIAPGLMFGVPVICDGGRYERVKDIGIDAFARQRIDLSVRELQEE 318
BLAST of CK934097 vs. ExPASy Swiss-Prot
Match: MDH_COREF (Malate dehydrogenase OS=Corynebacterium efficiens GN=mdh PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.066e-21 Identity = 55/130 (42.31%), Postives = 73/130 (56.15%), Query Frame = 1 Query: 4 DVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 393 D+ +ATV GEK V +LV D W EFI V +RGA II+ R DH+RDW+ GT TW S + S G+Y +P G+I P RNGEW +V+GL I++F R ++D EEL E+ Sbjct: 194 DITYATVG---GEK-VSDLVDHD-WYVNEFIPRVAKRGAEIIEVRGKSSAASAASSAVDHMRDWIQGTE--TWASAAIPSTGAYGIPEGIILGLPTVSRNGEWEVVEGLEINDFQRARIDANVEELQGER 316
BLAST of CK934097 vs. ExPASy Swiss-Prot
Match: MDH_PARUW (Malate dehydrogenase OS=Protochlamydia amoebophila (strain UWE25) GN=mdh PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.228e-21 Identity = 55/126 (43.65%), Postives = 74/126 (58.73%), Query Frame = 1 Query: 22 VNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGS-YNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 393 VN +KPV ++ D WL +FI +VQ+RGAAII+AR D +RD +L TP G W S + SDG+ Y + GLI+SFP +NGE +IV GL D F +K+ LT +EL EE+ Sbjct: 196 VNAKISQKPVETIIPDRQWLEKDFIESVQKRGAAIIQARGKSSAASAASALLDAMRDRILPTPTGQWFSTALLSDGNPYGIEEGLIFSFPCRVKKNGELSIVSGLKWDAFLEEKIKLTEQELKEER 321
BLAST of CK934097 vs. ExPASy Swiss-Prot
Match: MDH_CORGL (Malate dehydrogenase OS=Corynebacterium glutamicum GN=mdh PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.333e-19 Identity = 55/130 (42.31%), Postives = 70/130 (53.85%), Query Frame = 1 Query: 4 DVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 393 D+ +ATV GEK V +LV D W EFI V RGA II+ R DH+RDWV GT W S + S G+Y +P G+ P RNGEW IV+GL I +F R ++D A+EL E+ Sbjct: 199 DITYATVG---GEK-VTDLVDHD-WYVEEFIPRVANRGAEIIEVRGKSSAASAASSAIDHMRDWVQGTE--AWSSAAIPSTGAYGIPEGIFVGLPTVSRNGEWEIVEGLEISDFQRARIDANAQELQAER 321
BLAST of CK934097 vs. ExPASy Swiss-Prot
Match: MDH_CORGB (Malate dehydrogenase OS=Corynebacterium glutamicum (strain R) GN=mdh PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.333e-19 Identity = 55/130 (42.31%), Postives = 70/130 (53.85%), Query Frame = 1 Query: 4 DVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 393 D+ +ATV GEK V +LV D W EFI V RGA II+ R DH+RDWV GT W S + S G+Y +P G+ P RNGEW IV+GL I +F R ++D A+EL E+ Sbjct: 199 DITYATVG---GEK-VTDLVDHD-WYVEEFIPRVANRGAEIIEVRGKSSAASAASSAIDHMRDWVQGTE--AWSSAAIPSTGAYGIPEGIFVGLPTVSRNGEWEIVEGLEISDFQRARIDANAQELQAER 321
BLAST of CK934097 vs. ExPASy Swiss-Prot
Match: MDH_DESPS (Malate dehydrogenase OS=Desulfotalea psychrophila GN=mdh PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.877e-19 Identity = 53/131 (40.46%), Postives = 75/131 (57.25%), Query Frame = 1 Query: 4 DVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDG-SYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 393 D+++A + AGEK + + ++ W I +QQRGAA+IKAR DH+R+WVLG+ G WVSMGVYS G SY + +++S PV C +G+W V GL + F R L+ T EL E+ Sbjct: 194 DISYAEI---AGEKVAKGV--ENNWHGDNLIPIIQQRGAAVIKARGASSAASAASAAIDHMRNWVLGSG-GKWVSMGVYSRGNSYGLDEDIMFSLPVICEDGDWREVAGLELSSFQRAMLEATEAELQAER 318
BLAST of CK934097 vs. ExPASy Swiss-Prot
Match: MDH_LEPIN (Malate dehydrogenase OS=Leptospira interrogans GN=mdh PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.614e-19 Identity = 49/123 (39.84%), Postives = 68/123 (55.28%), Query Frame = 1 Query: 25 NTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 393 NT KPV +++ D WL G+FI VQQRGA IIKAR D +R + T G S V SDGSY GLI+ FP+ + I+QG+S+++F+++K +T EEL E+ Sbjct: 197 NTKISGKPVTDVISDHEWLKGDFIKNVQQRGAEIIKARGASSAASAANGVVDTVRGIITPTAPGDCFSAAVVSDGSYGAEKGLIFGFPLKSDGKKVEIIQGISLNDFAKEKFKITHEELVSER 319
BLAST of CK934097 vs. ExPASy Swiss-Prot
Match: MDH_LEPIC (Malate dehydrogenase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=mdh PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.614e-19 Identity = 49/123 (39.84%), Postives = 68/123 (55.28%), Query Frame = 1 Query: 25 NTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 393 NT KPV +++ D WL G+FI VQQRGA IIKAR D +R + T G S V SDGSY GLI+ FP+ + I+QG+S+++F+++K +T EEL E+ Sbjct: 197 NTKISGKPVTDVISDHEWLKGDFIKNVQQRGAEIIKARGASSAASAANGVVDTVRGIITPTAPGDCFSAAVVSDGSYGAEKGLIFGFPLKSDGKKVEIIQGISLNDFAKEKFKITHEELVSER 319 The following BLAST results are available for this feature:
BLAST of CK934097 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 185
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934097 ID=CK934097; Name=CK934097; organism=Citrus sinensis; type=EST; length=709bpback to top |