CK934097
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934097 vs. ExPASy Swiss-Prot
Match: MDH_DEIRA (Malate dehydrogenase OS=Deinococcus radiodurans GN=mdh PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.398e-29 Identity = 65/130 (50.00%), Postives = 84/130 (64.62%), Query Frame = 1 Query: 4 DVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 393 D++ ATVN KP E V D W ++I TV +RGAAII+AR DH+ DW LGT +G WVSMG+ SDGSY +P GLIY FPV ++G++ IVQGL + +FSR K+D TA+EL EE+ Sbjct: 196 DLSQATVNG----KPALEQV-DRTWYENDYIPTVAKRGAAIIEARGASSAASAASAAIDHMHDWALGTKDGEWVSMGIPSDGSYGIPEGLIYGFPVRVKDGKYEIVQGLDVSDFSRGKMDATAQELEEER 320
BLAST of CK934097 vs. ExPASy Swiss-Prot
Match: MDH_NITEU (Malate dehydrogenase OS=Nitrosomonas europaea GN=mdh PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 9.207e-29 Identity = 58/129 (44.96%), Postives = 82/129 (63.57%), Query Frame = 1 Query: 4 DVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEE 390 D++HA ++ + V +L+KD W+ FI TVQ RGA +I+AR DH+RDW+ GT + W++MG+ SDGSY +P G+IY FPV C+NG IVQGL I FSR +LD+ +EL++E Sbjct: 194 DLSHAEID----HQKVIDLIKDQTWVENSFIPTVQNRGAVVIEARGLSSAASAANAIIDHMRDWIFGTRDDDWITMGILSDGSYKIPKGVIYGFPVVCKNGGRKIVQGLEISPFSRTRLDIAYDELTQE 318
BLAST of CK934097 vs. ExPASy Swiss-Prot
Match: MDH_LARHH (Malate dehydrogenase OS=Laribacter hongkongensis (strain HLHK9) GN=mdh PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 9.207e-29 Identity = 67/130 (51.54%), Postives = 85/130 (65.38%), Query Frame = 1 Query: 4 DVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 393 D ATVN GE V+ ++ D+AW F+ TV +RGAAII+AR DHIRDWVLGT G WV+MG+ SDGSY +P G+ Y FPVTC++G++ IVQGL IDEFSR ++ T EL EE+ Sbjct: 197 DYRFATVN---GES-VKSMINDEAWNRDVFLPTVGKRGAAIIEARGLSSAASAANAAIDHIRDWVLGT-NGKWVTMGIPSDGSYGIPEGVTYGFPVTCKDGKYEIVQGLEIDEFSRACMNKTLAELEEER 321
BLAST of CK934097 vs. ExPASy Swiss-Prot
Match: MDH_SACEN (Malate dehydrogenase OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=mdh PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.202e-28 Identity = 68/130 (52.31%), Postives = 79/130 (60.77%), Query Frame = 1 Query: 4 DVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 393 D+ HA VN + V D AWL FI TV +RGAAII+AR DHI WV GTPEG W S V SDGSY VP GLI SFPV R+G + IVQGL IDEFSR+++D + ELSEE+ Sbjct: 195 DLFHAEVNGKVAAEQV-----DQAWLADTFIPTVAKRGAAIIEARGASSAASAANAAIDHIHTWVNGTPEGDWTSAAVVSDGSYGVPEGLISSFPVVARDGRYEIVQGLEIDEFSRQRIDASVNELSEER 319
BLAST of CK934097 vs. ExPASy Swiss-Prot
Match: MDH_BDEBA (Malate dehydrogenase OS=Bdellovibrio bacteriovorus GN=mdh PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.570e-28 Identity = 69/127 (54.33%), Postives = 86/127 (67.72%), Query Frame = 1 Query: 28 TAAGEKPVRELVK-----DDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 393 TA G K V EL+K DAW FI TV +RGAAII+AR DHIRDW LGT G WV+MG+ SDGSY++P G++Y FPVTC+NGE+ IV+GL ID FSR+K++ T +EL+EEK Sbjct: 204 TADGAK-VPELLKLGTAEGDAWNKDTFIPTVGKRGAAIIEARGLSSAASAASAAVDHIRDWWLGT-NGEWVTMGIPSDGSYDIPEGIMYGFPVTCKNGEYEIVKGLEIDAFSREKMNNTLKELNEEK 328
BLAST of CK934097 vs. ExPASy Swiss-Prot
Match: MDH_THETH (Malate dehydrogenase OS=Thermus thermophilus GN=mdh PE=1 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.051e-28 Identity = 64/129 (49.61%), Postives = 85/129 (65.89%), Query Frame = 1 Query: 4 DVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEE 390 D+ HA V+ +P ELV D W FI TV QRGAAII+AR +HIRDW LGTPEG WVSM V S G Y +P G++YSFPVT ++G + +V+GL I+EF+RK++++TA+EL +E Sbjct: 194 DLFHAEVDG----RPALELV-DMEWYEKVFIPTVAQRGAAIIQARGASSAASAANAAIEHIRDWALGTPEGDWVSMAVPSQGEYGIPEGIVYSFPVTAKDGAYRVVEGLEINEFARKRMEITAQELLDE 317
BLAST of CK934097 vs. ExPASy Swiss-Prot
Match: MDH_THET8 (Malate dehydrogenase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=mdh PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.051e-28 Identity = 64/129 (49.61%), Postives = 85/129 (65.89%), Query Frame = 1 Query: 4 DVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEE 390 D+ HA V+ +P ELV D W FI TV QRGAAII+AR +HIRDW LGTPEG WVSM V S G Y +P G++YSFPVT ++G + +V+GL I+EF+RK++++TA+EL +E Sbjct: 194 DLFHAEVDG----RPALELV-DMEWYEKVFIPTVAQRGAAIIQARGASSAASAANAAIEHIRDWALGTPEGDWVSMAVPSQGEYGIPEGIVYSFPVTAKDGAYRVVEGLEINEFARKRMEITAQELLDE 317
BLAST of CK934097 vs. ExPASy Swiss-Prot
Match: MDH_THET2 (Malate dehydrogenase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=mdh PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.051e-28 Identity = 64/129 (49.61%), Postives = 85/129 (65.89%), Query Frame = 1 Query: 4 DVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEE 390 D+ HA V+ +P ELV D W FI TV QRGAAII+AR +HIRDW LGTPEG WVSM V S G Y +P G++YSFPVT ++G + +V+GL I+EF+RK++++TA+EL +E Sbjct: 194 DLFHAEVDG----RPALELV-DMEWYEKVFIPTVAQRGAAIIQARGASSAASAANAAIEHIRDWALGTPEGDWVSMAVPSQGEYGIPEGIVYSFPVTAKDGAYRVVEGLEINEFARKRMEITAQELLDE 317
BLAST of CK934097 vs. ExPASy Swiss-Prot
Match: MDH_BORA1 (Malate dehydrogenase OS=Bordetella avium (strain 197N) GN=mdh PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.051e-28 Identity = 63/130 (48.46%), Postives = 86/130 (66.15%), Query Frame = 1 Query: 4 DVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 393 D ATV+ +P+ +L+ D+AW FI TV +RGAAII+AR DH+RDWVLG+ G WV+MG+ SDGSY +P G+IY FPVT NGE+T+V+ L +D FSR+++D T +EL EE+ Sbjct: 197 DYRFATVDG----QPLAKLINDEAWNRDTFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGS-NGKWVTMGIPSDGSYGIPEGIIYGFPVTTANGEYTMVKDLEVDAFSRERMDFTLKELLEER 321
BLAST of CK934097 vs. ExPASy Swiss-Prot
Match: MDH_AZOSB (Malate dehydrogenase OS=Azoarcus sp. (strain BH72) GN=mdh PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.051e-28 Identity = 62/115 (53.91%), Postives = 79/115 (68.70%), Query Frame = 1 Query: 49 VRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 393 V++L+ D AW F+ TV +RGAAII+AR DHIRDWVLG+ G WV+MG+ SDGSY +P G+IY FPVT NGE+ IVQGL IDEFSR+++ +T EL EE+ Sbjct: 209 VKDLINDAAWNKDVFLPTVGKRGAAIIEARGLSSAASAANAAIDHIRDWVLGS-NGEWVTMGIPSDGSYGIPEGVIYGFPVTTENGEYKIVQGLEIDEFSRERMTVTLNELLEER 322 The following BLAST results are available for this feature:
BLAST of CK934097 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 185
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934097 ID=CK934097; Name=CK934097; organism=Citrus sinensis; type=EST; length=709bpback to top |