CK934097
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934097 vs. ExPASy Swiss-Prot
Match: MDH_BURCA (Malate dehydrogenase OS=Burkholderia cenocepacia (strain AU 1054) GN=mdh PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.018e-27 Identity = 64/122 (52.46%), Postives = 79/122 (64.75%), Query Frame = 1 Query: 28 TAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 393 TA GE ++ L+ DD W FI TV +RGAAII+AR DH+RDWVLGT G WV+MG+ SDGSY +P +IY PVTC NGE+ V+GL ID FSR+K+D T EL EE+ Sbjct: 200 TAEGESLLK-LINDDVWNRDTFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGT-NGKWVTMGIPSDGSYGIPEDIIYGVPVTCENGEYKRVEGLEIDAFSREKMDGTLAELLEER 319
BLAST of CK934097 vs. ExPASy Swiss-Prot
Match: MDH_ACIAD (Malate dehydrogenase OS=Acinetobacter sp. (strain ADP1) GN=mdh PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.018e-27 Identity = 62/123 (50.41%), Postives = 81/123 (65.85%), Query Frame = 1 Query: 28 TAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 396 TA GE +++ + D W F+ TV +RGAAII+AR DH+RDW LGT G WV+MG+ SDGSY +P G+IY PVTC NGE+ V+GL IDEFSR+++D T +EL EE+A Sbjct: 201 TANGEN-LKDKINDAEWNKDVFLPTVGKRGAAIIEARGLSSAASAANAAIDHMRDWALGT-NGKWVTMGIPSDGSYGIPEGVIYGVPVTCENGEYKRVEGLEIDEFSRERMDKTLQELEEERA 321
BLAST of CK934097 vs. ExPASy Swiss-Prot
Match: MDH_NITEC (Malate dehydrogenase OS=Nitrosomonas eutropha (strain C91) GN=mdh PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.329e-27 Identity = 59/129 (45.74%), Postives = 79/129 (61.24%), Query Frame = 1 Query: 4 DVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEE 390 D+ HA + G+ V L+KD W+ FI TVQ+RGA +I+AR DH+R+W GT +G W +MG+ SDGSY +P G+IY FPV C+NG IVQGL I+ FSR +LD EL++E Sbjct: 194 DLYHAEI----GDTKVINLIKDPIWIENYFIPTVQKRGAVVIEARGLSSAASAANAIIDHLRNWFFGTADGDWTTMGILSDGSYEIPEGVIYGFPVICKNGMREIVQGLEINPFSRTRLDAAYNELTQE 318
BLAST of CK934097 vs. ExPASy Swiss-Prot
Match: MDH_BORPE (Malate dehydrogenase OS=Bordetella pertussis GN=mdh PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.329e-27 Identity = 63/130 (48.46%), Postives = 83/130 (63.85%), Query Frame = 1 Query: 4 DVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 393 D ATV G + + +L+ DDAW FI TV +RGAAII+AR DH+RDWVLG+ G WV+MG+ SDGSY +P G+IY FPV NGE+ +++ L ID FSR++LD T +EL EE+ Sbjct: 197 DFRFATV----GGQGLTQLINDDAWNRDTFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGS-NGKWVTMGIPSDGSYGIPEGIIYGFPVVTENGEYKMIKDLEIDAFSRERLDFTLKELLEER 321
BLAST of CK934097 vs. ExPASy Swiss-Prot
Match: MDH_BORPA (Malate dehydrogenase OS=Bordetella parapertussis GN=mdh PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.329e-27 Identity = 63/130 (48.46%), Postives = 83/130 (63.85%), Query Frame = 1 Query: 4 DVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 393 D ATV G + + +L+ DDAW FI TV +RGAAII+AR DH+RDWVLG+ G WV+MG+ SDGSY +P G+IY FPV NGE+ +++ L ID FSR++LD T +EL EE+ Sbjct: 197 DFRFATV----GGQGLTQLINDDAWNRDTFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGS-NGKWVTMGIPSDGSYGIPEGIIYGFPVVTENGEYKMIKDLEIDAFSRERLDFTLKELLEER 321
BLAST of CK934097 vs. ExPASy Swiss-Prot
Match: MDH_BORBR (Malate dehydrogenase OS=Bordetella bronchiseptica GN=mdh PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.329e-27 Identity = 63/130 (48.46%), Postives = 83/130 (63.85%), Query Frame = 1 Query: 4 DVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 393 D ATV G + + +L+ DDAW FI TV +RGAAII+AR DH+RDWVLG+ G WV+MG+ SDGSY +P G+IY FPV NGE+ +++ L ID FSR++LD T +EL EE+ Sbjct: 197 DFRFATV----GGQGLTQLINDDAWNRDTFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGS-NGKWVTMGIPSDGSYGIPEGIIYGFPVVTENGEYKMIKDLEIDAFSRERLDFTLKELLEER 321
BLAST of CK934097 vs. ExPASy Swiss-Prot
Match: MDH_PROAC (Malate dehydrogenase OS=Propionibacterium acnes GN=mdh PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.736e-27 Identity = 67/130 (51.54%), Postives = 85/130 (65.38%), Query Frame = 1 Query: 4 DVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 393 DV HA V AG+K + ++AW+ EFI TV +RGAAII AR + +RDW+ TPEG WVSM + SDGSY VP GLI SFPVT NG+ IVQGL ID+FSR K+D +A+EL++E+ Sbjct: 194 DVFHAEV---AGQKATN--LVNEAWIENEFIPTVAKRGAAIIDARGASSAASAANATVECMRDWMGSTPEGDWVSMAIPSDGSYGVPEGLISSFPVTITNGKVEIVQGLDIDDFSRAKIDASAKELADER 318
BLAST of CK934097 vs. ExPASy Swiss-Prot
Match: MDH_BURXL (Malate dehydrogenase OS=Burkholderia xenovorans (strain LB400) GN=mdh PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.736e-27 Identity = 63/124 (50.81%), Postives = 81/124 (65.32%), Query Frame = 1 Query: 22 VNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 393 V TA G+ + +L+ D+ W FI TV +RGAAII+AR DH+RDWVLGT G WV+MG+ SDGSY +P +IY PVTC NGE+ V+GL ID FSR+K+D T +EL EE+ Sbjct: 198 VATAEGQD-LTKLINDEEWNRNTFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGT-NGKWVTMGIPSDGSYGIPEDIIYGVPVTCENGEYKRVEGLEIDAFSREKMDGTLQELLEER 319
BLAST of CK934097 vs. ExPASy Swiss-Prot
Match: MDH_BURPP (Malate dehydrogenase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=mdh PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.736e-27 Identity = 63/122 (51.64%), Postives = 79/122 (64.75%), Query Frame = 1 Query: 28 TAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 393 TA G+ + +L+ DD W FI TV +RGAAII+AR DH+RDWVLGT G WV+MG+ SDGSY +P +IY PVTC NGE+ V+GL ID FSR+K+D T EL EE+ Sbjct: 200 TAEGQD-LTKLINDDEWNRNTFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGT-NGKWVTMGIPSDGSYGIPEDIIYGVPVTCENGEYKRVEGLEIDAFSREKMDGTLNELLEER 319
BLAST of CK934097 vs. ExPASy Swiss-Prot
Match: MDH_AQUAR (Malate dehydrogenase OS=Aquaspirillum arcticum GN=mdh PE=1 SV=3) HSP 1 Score: 122.865 bits (307), Expect = 1.736e-27 Identity = 62/130 (47.69%), Postives = 85/130 (65.38%), Query Frame = 1 Query: 4 DVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 393 D +A ++ A+ V++++ DDAW F+ TV +RGAAII AR DHI DWVLGT G W +MG+ SDGSY +P G+I+ FPVT NGE+ IVQGLSID FS++++++T EL EE+ Sbjct: 197 DYRYAQIDGAS----VKDMINDDAWNRDTFLPTVGKRGAAIIDARGVSSAASAANAAIDHIHDWVLGTA-GKWTTMGIPSDGSYGIPEGVIFGFPVTTENGEYKIVQGLSIDAFSQERINVTLNELLEEQ 321 The following BLAST results are available for this feature:
BLAST of CK934097 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 185
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934097 ID=CK934097; Name=CK934097; organism=Citrus sinensis; type=EST; length=709bpback to top |