CK934097
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934097 vs. ExPASy Swiss-Prot
Match: MDH_BURM9 (Malate dehydrogenase OS=Burkholderia mallei (strain NCTC 10229) GN=mdh PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.052e-27 Identity = 63/122 (51.64%), Postives = 78/122 (63.93%), Query Frame = 1 Query: 28 TAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 393 TA GE ++ L+ DD W FI TV +RGAAII+AR DH+RDWVLGT G WV+MG+ SDGSY +P +IY PV C NGE+ V+GL ID FSR+K+D T EL EE+ Sbjct: 200 TAEGESLLK-LINDDVWNRDTFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGT-NGKWVTMGIPSDGSYGIPEDIIYGVPVICENGEYKRVEGLEIDAFSREKMDGTLAELLEER 319
BLAST of CK934097 vs. ExPASy Swiss-Prot
Match: MDH_BURM7 (Malate dehydrogenase OS=Burkholderia mallei (strain NCTC 10247) GN=mdh PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.052e-27 Identity = 63/122 (51.64%), Postives = 78/122 (63.93%), Query Frame = 1 Query: 28 TAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 393 TA GE ++ L+ DD W FI TV +RGAAII+AR DH+RDWVLGT G WV+MG+ SDGSY +P +IY PV C NGE+ V+GL ID FSR+K+D T EL EE+ Sbjct: 200 TAEGESLLK-LINDDVWNRDTFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGT-NGKWVTMGIPSDGSYGIPEDIIYGVPVICENGEYKRVEGLEIDAFSREKMDGTLAELLEER 319
BLAST of CK934097 vs. ExPASy Swiss-Prot
Match: MDH_POLSQ (Malate dehydrogenase OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=mdh PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.598e-27 Identity = 60/118 (50.85%), Postives = 77/118 (65.25%), Query Frame = 1 Query: 43 KPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 396 K V++ + D AW FI TV +RGAAII+AR DHI DWVLGT G WV+MG+ S G Y +PA +IY FPVTC NGE+ +++GL IDEFSR+++ T EL EE+A Sbjct: 206 KSVKDSINDAAWNKDVFIPTVGKRGAAIIEARGLSSAASAANAAIDHIHDWVLGT-NGKWVTMGIPSKGEYGIPAEVIYGFPVTCENGEYKMIEGLEIDEFSRERMTHTLNELLEEQA 322
BLAST of CK934097 vs. ExPASy Swiss-Prot
Match: MDH_JANMA (Malate dehydrogenase OS=Janthinobacterium sp. (strain Marseille) GN=mdh PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.598e-27 Identity = 60/120 (50.00%), Postives = 78/120 (65.00%), Query Frame = 1 Query: 34 AGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 393 A K V+E + D+ W F+ TV +RGAAII AR DH+RDWVLGT G WV+MG+ SDGSY +P I+ FPVT NGE+ IVQGL ID FS+++++LT +EL EE+ Sbjct: 203 ADGKSVKEAINDEVWNKDVFLPTVGKRGAAIIDARGVSSAASAANAAIDHVRDWVLGT-NGKWVTMGIPSDGSYGIPKDTIFGFPVTVENGEYKIVQGLEIDAFSQERINLTLKELLEER 321
BLAST of CK934097 vs. ExPASy Swiss-Prot
Match: MDH_PSYA2 (Malate dehydrogenase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=mdh PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.617e-27 Identity = 65/131 (49.62%), Postives = 81/131 (61.83%), Query Frame = 1 Query: 4 DVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDE-FSRKKLDLTAEELSEEK 393 D+ +TVN K +LV D W G +I VQQRGAAIIKAR H+R WVLGT E WVSMGVYS+G Y + GLIYSFP TC NG+W+IV G+ + FS++K+ T +ELSEE+ Sbjct: 196 DLTASTVNG----KLALDLV-DRTWYEGTYIPEVQQRGAAIIKARGASSAASAANAAIAHMRTWVLGTDENDWVSMGVYSNGEYGIAKGLIYSFPCTCTNGDWSIVDGVDVSSAFSKEKMAATEQELSEER 321
BLAST of CK934097 vs. ExPASy Swiss-Prot
Match: MDH_POLNS (Malate dehydrogenase OS=Polynucleobacter necessarius (strain STIR1) GN=mdh PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.920e-26 Identity = 59/118 (50.00%), Postives = 77/118 (65.25%), Query Frame = 1 Query: 43 KPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 396 K V++ + D AW FI TV +RGAAII+AR DHI DWVLGT G WV+MG+ S G Y++PA +IY FPV C NGE+ +++GL IDEFSR+++ T EL EE+A Sbjct: 206 KSVKDSINDAAWNKDVFIPTVGKRGAAIIEARGLSSAASAANAAIDHIHDWVLGT-NGKWVTMGIPSKGEYDIPAEVIYGFPVVCENGEYKMIEGLEIDEFSRERMTHTLNELLEEQA 322
BLAST of CK934097 vs. ExPASy Swiss-Prot
Match: MDH_BURP8 (Malate dehydrogenase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=mdh PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.507e-26 Identity = 61/124 (49.19%), Postives = 79/124 (63.71%), Query Frame = 1 Query: 22 VNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 393 V TA G+ + +L+ D+ W FI TV +RGAAII+AR DH+RDWVLGT G WV+MG+ SDGSY +P ++Y VTC NGE+ V+GL ID FSR+K+D T EL EE+ Sbjct: 198 VATAEGQD-LTKLINDEEWNRNTFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGT-NGKWVTMGIPSDGSYGIPEDIVYGVAVTCENGEYKRVEGLQIDAFSREKMDNTLNELLEER 319
BLAST of CK934097 vs. ExPASy Swiss-Prot
Match: MDH_SYNFM (Malate dehydrogenase OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=mdh PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.275e-26 Identity = 61/131 (46.56%), Postives = 82/131 (62.60%), Query Frame = 1 Query: 4 DVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 396 D+ TV+ +P +LV D+AW E+I V +RGAAII+AR DH+ DW LGT G WV+MG+ SDGSY +P G +Y PVTC G++ V+GL ID FSR+K+D T +EL+EE+A Sbjct: 197 DIRFCTVDG----QPAVKLVNDEAWYRNEYIPKVGKRGAAIIEARGLSSAASAANAAIDHMHDWALGT-NGKWVTMGLPSDGSYGIPEGTMYGVPVTCTPGKYERVKGLEIDAFSREKMDFTLKELTEEQA 322
BLAST of CK934097 vs. ExPASy Swiss-Prot
Match: MDH_XYLFT (Malate dehydrogenase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=mdh PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.277e-26 Identity = 58/117 (49.57%), Postives = 76/117 (64.96%), Query Frame = 1 Query: 46 PVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 396 P+ E + D AW FI TV +RGAAII+AR DH+RDW+LG+ G W++MGV SDGSY +P G+I+ FPVT NGE++IV+ L ID FS+ +D T EL EE+A Sbjct: 206 PIIEAINDQAWNANSFIPTVSKRGAAIIEARGLSSAASAANAAIDHMRDWLLGS-NGKWITMGVPSDGSYGIPEGMIFGFPVTTTNGEYSIVKDLPIDTFSKTYIDKTLAELEEERA 321
BLAST of CK934097 vs. ExPASy Swiss-Prot
Match: MDH_XYLFM (Malate dehydrogenase OS=Xylella fastidiosa (strain M12) GN=mdh PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.277e-26 Identity = 58/117 (49.57%), Postives = 76/117 (64.96%), Query Frame = 1 Query: 46 PVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 396 P+ E + D AW FI TV +RGAAII+AR DH+RDW+LG+ G W++MGV SDGSY +P G+I+ FPVT NGE++IV+ L ID FS+ +D T EL EE+A Sbjct: 206 PIIEAINDQAWNANSFIPTVSKRGAAIIEARGLSSAASAANAAIDHMRDWLLGS-NGKWITMGVPSDGSYGIPEGMIFGFPVTTTNGEYSIVKDLPIDTFSKTYIDKTLAELEEERA 321 The following BLAST results are available for this feature:
BLAST of CK934097 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 185
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK934097 ID=CK934097; Name=CK934097; organism=Citrus sinensis; type=EST; length=709bpback to top |