CK934120
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RB11B_DICDI (Ras-related protein Rab-11B OS=Dictyostelium discoideum GN=rab11B PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.184e-17 Identity = 42/91 (46.15%), Postives = 61/91 (67.03%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNS 430 L K+++IGDSGVGKS LL R +T+++D K IKLQ+WDTAGQE++ +IT +YY+GA+G L+VY++ D +SFN+ Sbjct: 11 LCKIVVIGDSGVGKSNLLSRYNKNEFSVGKLSTIGVEFSTKTLKIDNKLIKLQLWDTAGQEKYNSITESYYKGAIGALIVYNIADRNSFNN 101
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB37_MOUSE (Ras-related protein Rab-37 OS=Mus musculus GN=Rab37 PE=1 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 2.184e-17 Identity = 42/90 (46.67%), Postives = 62/90 (68.89%), Query Frame = 2 Query: 164 KLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXX-KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNS 430 K++L+GDSGVGK+C L++ + + + +DG R+KLQIWDTAGQERFR++T AYYR A +LL+YD+T++SSF++ Sbjct: 31 KVMLLGDSGVGKTCFLIQFKDGAFLSGTFIATVGIDSRNKVVTVDGARVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNQSSFDN 120
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB26_RAT (Ras-related protein Rab-26 OS=Rattus norvegicus GN=Rab26 PE=2 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 2.184e-17 Identity = 42/90 (46.67%), Postives = 63/90 (70.00%), Query Frame = 2 Query: 164 KLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXX-KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNS 430 K++L+GDSGVGK+CLL+R + + +++DG ++KLQIWDTAGQERFR++T AYYR A +LL+YD+T++ SF++ Sbjct: 66 KVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDITNKDSFDN 155
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB26_MOUSE (Ras-related protein Rab-26 OS=Mus musculus GN=Rab26 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.184e-17 Identity = 42/90 (46.67%), Postives = 63/90 (70.00%), Query Frame = 2 Query: 164 KLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXX-KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNS 430 K++L+GDSGVGK+CLL+R + + +++DG ++KLQIWDTAGQERFR++T AYYR A +LL+YD+T++ SF++ Sbjct: 69 KVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDITNKDSFDN 158
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB4A_RAT (Ras-related protein Rab-4A OS=Rattus norvegicus GN=Rab4a PE=2 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 3.725e-17 Identity = 43/91 (47.25%), Postives = 57/91 (62.64%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNS 430 L K L+IG++G GKSCLL + + I + GK +KLQIWDTAGQERFR++T +YYRGA G LLVYD+T ++N+ Sbjct: 8 LFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNA 98
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB4A_MOUSE (Ras-related protein Rab-4A OS=Mus musculus GN=Rab4a PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.725e-17 Identity = 43/91 (47.25%), Postives = 57/91 (62.64%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNS 430 L K L+IG++G GKSCLL + + I + GK +KLQIWDTAGQERFR++T +YYRGA G LLVYD+T ++N+ Sbjct: 8 LFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGMEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNA 98
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB4A_HUMAN (Ras-related protein Rab-4A OS=Homo sapiens GN=RAB4A PE=1 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 3.725e-17 Identity = 43/91 (47.25%), Postives = 57/91 (62.64%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNS 430 L K L+IG++G GKSCLL + + I + GK +KLQIWDTAGQERFR++T +YYRGA G LLVYD+T ++N+ Sbjct: 8 LFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNA 98
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB4A_BOVIN (Ras-related protein Rab-4A OS=Bos taurus GN=RAB4A PE=2 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 3.725e-17 Identity = 43/91 (47.25%), Postives = 57/91 (62.64%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNS 430 L K L+IG++G GKSCLL + + I + GK +KLQIWDTAGQERFR++T +YYRGA G LLVYD+T ++N+ Sbjct: 8 LFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNA 98
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB26_HUMAN (Ras-related protein Rab-26 OS=Homo sapiens GN=RAB26 PE=1 SV=3) HSP 1 Score: 88.9669 bits (219), Expect = 3.725e-17 Identity = 42/90 (46.67%), Postives = 64/90 (71.11%), Query Frame = 2 Query: 164 KLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXX-KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNS 430 K++L+GDSGVGK+CLL+R + + +++DG ++KLQ+WDTAGQERFR++T AYYR A +LL+YDVT+++SF++ Sbjct: 65 KVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDN 154
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RB11A_LOTJA (Ras-related protein Rab11A OS=Lotus japonicus GN=RAB11A PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.354e-17 Identity = 42/90 (46.67%), Postives = 58/90 (64.44%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN 427 + K++LIGDS VGKS +L R + RT+ +D K +K QIWDTAGQER+R +T+AYYRGA+G +LVYD+T +F+ Sbjct: 17 VFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFD 106 The following BLAST results are available for this feature:
BLAST of CK934120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 330
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934120 ID=CK934120; Name=CK934120; organism=Citrus sinensis; type=EST; length=851bpback to top |