CK934195

Overview
NameCK934195
Unique NameCK934195
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length775
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1188 contig Csv1_Contig1188:1..756. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934195 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 5.171e-68
Identity = 128/228 (56.14%), Postives = 157/228 (68.86%), Query Frame = 3
Query:  114 AQNCGS---GVVCPGGECCSRFGWCGLTTDYRCEGCQSNCNQVVCGECD-PDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR--GKYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAXXPKPS 773
            A+ CG+   G  CP   CCSR+GWCG T+D+  +GCQS C+   CG    P   +  DG  +G I+ R +FE LL +RND  CPAR FYTY+AF+ AA AFPAFG +GN   RKRE+AAF  QT HETTGGWP AP G ++WGYCF +E     SDYC P+  +PC    KYYGRGPIQL++N NY   G A+GVDLL+NPDL+ATD  +SFK+A+WFWMT    KPS
Sbjct:   32 AEQCGAQAGGARCPNCLCCSRWGWCGTTSDFCGDGCQSQCSG--CGPTPTPTPPSPSDG--VGSIVPRDLFERLLLHRNDGACPARGFYTYEAFLAAAAAFPAFGGTGNTETRKREVAAFLGQTSHETTGGWPTAPDGPFSWGYCFKQEQN-PPSDYCQPSPEWPCAPGRKYYGRGPIQLSFNFNYGPAGRAIGVDLLSNPDLVATDATVSFKTALWFWMTPQGNKPS 254          
BLAST of CK934195 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2)

HSP 1 Score: 257.299 bits (656), Expect = 6.753e-68
Identity = 124/229 (54.15%), Postives = 150/229 (65.50%), Query Frame = 3
Query:  114 AQNCGS---GVVCPGGECCSRFGWCGLTTDYRCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNET-MRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNRE-VGAASSDYCDPN--YPCRG--KYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAXXPKPS 773
            A+ CGS   G VCP   CCS+FGWCG T+DY   GCQS C+   CG   P   +   G  +  I+SR +F+ +L +RND  CPA  FYTYDAF+ AA AFP F  +G +    KRE+AAF AQT HETTGGW  AP G YAWGYCF  E  GAA  DYC  +  +PC    KYYGRGPIQL++N NY   G+A+G DLL +PDL+A+D  +SF +A WFWMT   PKPS
Sbjct:   21 AEQCGSQAGGAVCPNCLCCSQFGWCGSTSDYCGAGCQSQCSAAGCGGGGPTPPSGSGGSGVASIVSRSLFDQMLLHRNDAACPASNFYTYDAFVAAASAFPGFAAAGGDADTNKREVAAFLAQTSHETTGGWATAPDGPYAWGYCFKEENGGAAGPDYCQQSAQWPCAAGKKYYGRGPIQLSYNFNYGPAGQAIGADLLGDPDLVASDATVSFDTAFWFWMTPQSPKPS 249          
BLAST of CK934195 vs. ExPASy Swiss-Prot
Match: CHI1_HORVU (26 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=4)

HSP 1 Score: 256.529 bits (654), Expect = 1.152e-67
Identity = 130/227 (57.27%), Postives = 156/227 (68.72%), Query Frame = 3
Query:  114 AQNCGS---GVVCPGGECCSRFGWCGLTTDYRCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR-GK-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAXXPKPS 773
            A+ CGS   G  CP   CCSRFGWCG +T Y  +GCQS C+    G   P   T   GG +  I+SR +F+ +L +RND  C A+ FYTYDAF+ AA AF  FG +G    RKRE+AAF AQT HETTGGW  AP G +AWGYCF +E G A+S+YC P+  +PC  GK YYGRGPIQL+ N NY   G A+GVDLL NPDL+ATDP +SFK+A+WFWMTA  PKPS
Sbjct:   19 AEQCGSQAGGATCPNCLCCSRFGWCG-STPYCGDGCQSQCSGCGGGST-PVTPTPSGGGGVSSIVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAASAFRGFGTTGGTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERG-ATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMTAQAPKPS 242          
BLAST of CK934195 vs. ExPASy Swiss-Prot
Match: CHI3_TOBAC (Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 1.965e-67
Identity = 129/230 (56.09%), Postives = 153/230 (66.52%), Query Frame = 3
Query:  111 SAQNCGS---GVVCPGGECCSRFGWCGLTTDYRCEG-CQSNCNQVVCGECDPDDGTAGDG-GELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYC--DPNYPCR--GKYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAXXPKPS 773
            SA+ CG    G  CP G CCS FGWCG T DY   G CQS C         P   T G   G++  IIS  MF+ +L++RND  C  + FYTY+AFI AA++F  FG +G+ T RKRE+AAFFAQT HETTGGW  AP G YAWGYC+ RE G   S YC     +PC    KYYGRGPIQ+++N NY  CG A+G +LLNNPDL+AT+ V+SFKSAIWFWMTA  PKPS
Sbjct:   22 SAEQCGKQAGGARCPSGMCCSNFGWCGNTQDYCGPGKCQSQCPSGPGPTPRPPTPTPGPSTGDISNIISSSMFDQMLKHRNDNTCQGKSFYTYNAFITAARSFRGFGTTGDTTRRKREVAAFFAQTSHETTGGWDTAPDGRYAWGYCYLREQGNPPS-YCVQSSQWPCAPGQKYYGRGPIQISYNYNYGPCGRAIGQNLLNNPDLVATNAVVSFKSAIWFWMTAQSPKPS 250          
BLAST of CK934195 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 5.717e-67
Identity = 120/227 (52.86%), Postives = 152/227 (66.96%), Query Frame = 3
Query:  117 QNCGS---GVVCPGGECCSRFGWCGLTTDYRCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNRE-VGAASSDYC--DPNYPCRG--KYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAXXPKPS 773
            + CGS   G +CP   CCS++GWCG T+ Y   GCQS C+   CG   P   + G G  +  I+SR +F+ +L +RND  CPA+ FYTYDAF+ AA AFP+F  +G+   RKRE+AAF AQT HETTGGW  AP G Y+WGYCF  E  G   SDYC     +PC    KYYGRGPIQ+++N NY   G+A+G +LL+NPDL+A+D  +SFK+A WFWMT   PKPS
Sbjct:   21 EQCGSQAGGALCPNCLCCSQYGWCGSTSAYCGSGCQSQCSGS-CGGGGPTPPSGGGGSGVASIVSRSLFDQMLLHRNDAACPAKNFYTYDAFVAAANAFPSFATTGDAATRKREVAAFLAQTSHETTGGWATAPDGPYSWGYCFKEENNGNVGSDYCVQSSQWPCAAGKKYYGRGPIQISYNYNYGPAGQAIGSNLLSNPDLVASDATVSFKTAFWFWMTPQSPKPS 246          
BLAST of CK934195 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2)

HSP 1 Score: 253.832 bits (647), Expect = 7.467e-67
Identity = 120/228 (52.63%), Postives = 152/228 (66.67%), Query Frame = 3
Query:  117 QNCGS---GVVCPGGECCSRFGWCGLTTDYRCEGCQSNCNQVVCGECD--PDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCD--PNYPCRG--KYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAXXPKPS 773
            + CGS   G +CP   CCS++GWCG T+DY   GCQS C+    G C   P   ++G G  +  IIS  +F+ +L +RND+ C A+ FYTYDAF+ AA A+P F  +G+    KRE+AAF AQT HETTGGWP AP G Y+WGYCF  E    +  YC+  P +PC    KYYGRGPIQ+T+N NY   G+A+G DLLNNPDL+A+D  +SFK+A WFWMT   PKPS
Sbjct:   19 EQCGSQAGGALCPNCLCCSQYGWCGSTSDYCGAGCQSQCS----GGCGGGPTPPSSGGGSGVASIISPSLFDQMLLHRNDQACAAKGFYTYDAFVAAANAYPDFATTGDADTCKREVAAFLAQTSHETTGGWPTAPDGPYSWGYCFKEENNGNAPTYCEPKPEWPCAAGKKYYGRGPIQITYNYNYGPAGQAIGSDLLNNPDLVASDATVSFKTAFWFWMTPQSPKPS 242          
BLAST of CK934195 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 4.097e-65
Identity = 121/226 (53.54%), Postives = 151/226 (66.81%), Query Frame = 3
Query:  114 AQNCGS---GVVCPGGECCSRFGWCGLTTDYRCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDP-NYPCR--GKYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAXXPKPS 773
            A+ CGS   G VCP G CCS+FG+CG T  Y  +GCQS C         P   T G  G++G+++   +F+ +L+YRND RC    FYTYDAFI AA++F  FG +G++  +K+E+AAF AQT HETTGGWP AP G YAWGYCF  E       YC P ++PC    KYYGRGPIQLT N NY   G+A+  DL+NNPDLL+T+P +SFK+AIWFWMT    KPS
Sbjct:   23 AEQCGSQAGGAVCPNGLCCSKFGFCGSTDPYCGDGCQSQCKSSPTPTI-PTPSTGG--GDVGRLVPSSLFDQMLKYRNDGRCAGHGFYTYDAFIAAARSFNGFGTTGDDNTKKKELAAFLAQTSHETTGGWPTAPDGPYAWGYCFVSEQN-TQEVYCSPKDWPCAPGKKYYGRGPIQLTHNYNYGLAGQAIKEDLINNPDLLSTNPTVSFKTAIWFWMTPQANKPS 244          
BLAST of CK934195 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 7.484e-59
Identity = 108/165 (65.45%), Postives = 129/165 (78.18%), Query Frame = 3
Query:  291 KIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYC--DPNYPCR-GK-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAXXPKPS 773
            KIISR MF+ +L++RN+  CPA+ FYTYDAF+ AAK+FP+FG +G+  +RKRE+AAF  QT HETTGGWP AP G YAWGYCF +E    SS+YC   P YPC  GK YYGRGP+QL+WN NY  CGEAL V+LL NPDL+ATD VLSFK+A+WFWMT   PKPS
Sbjct:    4 KIISRSMFDQMLKHRNNPACPAKGFYTYDAFLAAAKSFPSFGTTGSTDVRKRELAAFLGQTSHETTGGWPSAPDGPYAWGYCFLKERN-PSSNYCAPSPRYPCAPGKSYYGRGPLQLSWNYNYGPCGEALRVNLLGNPDLVATDRVLSFKTALWFWMTPQAPKPS 167          
BLAST of CK934195 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.725e-55
Identity = 115/231 (49.78%), Postives = 146/231 (63.20%), Query Frame = 3
Query:  114 AQNCG---SGVVCPGGECCSRFGWCGLTTDYRCEGCQSNCNQVVCGECDPDDG-----TAGDGGELG--KIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR-GK-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAXXP 764
            A+ CG    G  CP   CCSR+GWCGLT DY   GCQS C   V  +   DD      TA  GG  G   +++   FE +L +R+D  CPAR FY Y AF+ AA AFPAF  +G+   RKRE+AAF AQT H T+       GG Y+WGYC+ +EV  A+SD+C PN  +PC  GK Y+ RGP+Q+ +N NY   GEA+G DLL NP+L+ATDP ++FK+A+W WMTA  P
Sbjct:   32 AEQCGRQAGGARCPNRLCCSRWGWCGLTDDYCKGGCQSQCR--VSRDGGDDDVAAVLLTAPGGGRAGVASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCY-KEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSP 252          
BLAST of CK934195 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.725e-55
Identity = 115/231 (49.78%), Postives = 146/231 (63.20%), Query Frame = 3
Query:  114 AQNCG---SGVVCPGGECCSRFGWCGLTTDYRCEGCQSNCNQVVCGECDPDDG-----TAGDGGELG--KIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR-GK-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAXXP 764
            A+ CG    G  CP   CCSR+GWCGLT DY   GCQS C   V  +   DD      TA  GG  G   +++   FE +L +R+D  CPAR FY Y AF+ AA AFPAF  +G+   RKRE+AAF AQT H T+       GG Y+WGYC+ +EV  A+SD+C PN  +PC  GK Y+ RGP+Q+ +N NY   GEA+G DLL NP+L+ATDP ++FK+A+W WMTA  P
Sbjct:   32 AEQCGRQAGGARCPNRLCCSRWGWCGLTDDYCKGGCQSQCR--VSRDGGDDDVAAVLLTAPGGGRAGVASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCY-KEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSP 252          
The following BLAST results are available for this feature:
BLAST of CK934195 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
CHI2_ORYSJ5.171e-6856.14Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI12_ORYSJ6.753e-6854.15Chitinase 12 OS=Oryza sativa subsp. japonica GN=Ch... [more]
CHI1_HORVU1.152e-6757.2726 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=... [more]
CHI3_TOBAC1.965e-6756.09Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3... [more]
CHI1_ORYSJ5.717e-6752.86Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI3_ORYSJ7.467e-6752.63Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHIX_PEA4.097e-6553.54Endochitinase OS=Pisum sativum PE=2 SV=1[more]
CHIT_CARPA7.484e-5965.45Endochitinase OS=Carica papaya PE=1 SV=1[more]
CHI7_ORYSJ1.725e-5549.78Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI7_ORYSI1.725e-5549.78Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004540_C03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IF_C03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934195 ID=CK934195; Name=CK934195; organism=Citrus sinensis; type=EST; length=775bp
GGGGATACACCAAGCAGAGGATAGTTGATATCATAACTGTTGCTTTCAAA
ATGAGGCTTATTGGGTCCTTACTAATTTTCTCTCTGGTTTTATCTTTTGT
ACTAGGAGGCTCAGCACAGAACTGTGGAAGCGGCGTTGTGTGCCCAGGAG
GGGAGTGTTGTAGTCGATTTGGTTGGTGTGGCCTAACAACAGACTACCGT
TGTGAAGGCTGCCAAAGTAACTGTAATCAGGTTGTTTGCGGTGAATGTGA
TCCCGACGACGGGACGGCTGGCGATGGCGGTGAACTGGGCAAGATCATCT
CAAGGAAGATGTTTGAAGACTTGCTTGAGTATAGAAATGATAAACGATGC
CCTGCCAGATGCTTCTACACTTATGATGCTTTTATAGAGGCAGCCAAAGC
TTTTCCAGCCTTTGGTAATTCTGGAAATGAAACCATGCGTAAAAGAGAAA
TTGCTGCCTTTTTTGCCCAAACTGGCCATGAAACTACTGGGGGATGGCCC
GATGCACCTGGTGGCGAATATGCTTGGGGATATTGCTTTAATAGGGAAGT
TGGTGCTGCGTCGTCCGACTACTGTGATCCTAACTATCCATGTCGAGGGA
AGTACTATGGCCGAGGTCCAATTCAACTCACTTGGAATTGCAATTACTTA
AGGTGCGGAGAAGCCTTGGGGGTGGACTTGTTGAACAATCCAGACCTACT
TGCCACTGATCCAGTACTATCATTCAAGTCAGCAATCTGGTTCTGGATGA
CTGCACNNNCACCAAAGCCATCGTG
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