CK934195

Overview
NameCK934195
Unique NameCK934195
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length775
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934195 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 7.519e-43
Identity = 89/163 (54.60%), Postives = 109/163 (66.87%), Query Frame = 3
Query:  285 LGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRGKYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAXXPKPS 773
            +G I++  +F+ +L+ RND RC A  FYTYDAFI AA +FP FG +G++T RK+EIAAFF QT HETTGG   +P G YA GYCF RE     +            YYGRGPIQLT   NY   G+A+  DL+NNPDL+ATD  +SFK+AIWFWMT    KPS
Sbjct:   26 VGSIVTSDLFDQMLKNRNDARCFAVRFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGG-TLSPDGPYAGGYCFLREGNQMGNG-----------YYGRGPIQLTGQSNYDLAGKAIEQDLVNNPDLVATDATVSFKTAIWFWMTPQGNKPS 176          
BLAST of CK934195 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 9.820e-43
Identity = 88/163 (53.99%), Postives = 110/163 (67.48%), Query Frame = 3
Query:  285 LGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRGKYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAXXPKPS 773
            +G I++  +F ++L+ RND RCPA  FYTYDAFI AA +FP FG SG++T R++EIAAFF QT HETTGG   A    +  GYCF R+     +D  D       +YYGRGPIQLT   NY + G A+  DL+NNPDL+ATD  +SFK+AIWFWMT    KPS
Sbjct:   27 IGSIVTNDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTSGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQ-----NDQSD-------RYYGRGPIQLTNQNNYEKAGNAIRQDLVNNPDLVATDATISFKTAIWFWMTPQDNKPS 175          
BLAST of CK934195 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 9.820e-43
Identity = 86/183 (46.99%), Postives = 113/183 (61.75%), Query Frame = 3
Query:  261 GTAGDGG------ELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCD------PNYPCRGKYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAXXPKPS 773
            G  G GG       +  I+S +++  L  +++D  CPAR FYTY +F+ AA  FP F  +G    RKRE+AAF AQ  HETTGGW  AP G YAWG C+  E+   SS YCD      P YP +  Y+GRGPIQ++WN NY   G+ALG D L NP+++A    ++F++A+WFWMT    KPS
Sbjct:   35 GGGGGGGYSPSPSPVSSIVSEQLYASLFLHKDDAACPARGFYTYASFVRAATRFPRFAATGCADARKREVAAFLAQISHETTGGWATAPDGPYAWGLCYKEEINPQSS-YCDATDKQWPCYPGK-SYHGRGPIQISWNFNYGPAGQALGFDGLRNPEIVANCSDIAFQTALWFWMTPRDTKPS 215          
BLAST of CK934195 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.282e-42
Identity = 87/163 (53.37%), Postives = 111/163 (68.10%), Query Frame = 3
Query:  285 LGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRGKYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAXXPKPS 773
            +G I++  +F ++L+ RND RCPA  FYTYDAFI AA +FP FG +G++T R++EIAAFF QT HETTGG   A    +  GYCF R+     +D  D       +YYGRGPIQLT   NY + G A+G +L+NNPDL+ATD  +SFK+AIWFWMT    KPS
Sbjct:   27 IGSIVTSDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTTGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQ-----NDQSD-------RYYGRGPIQLTNRNNYEKAGTAIGQELVNNPDLVATDATISFKTAIWFWMTPQDNKPS 175          
BLAST of CK934195 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3)

HSP 1 Score: 169.859 bits (429), Expect = 1.418e-41
Identity = 92/229 (40.17%), Postives = 126/229 (55.02%), Query Frame = 3
Query:  111 SAQNCGSGV---VCPGGECCSRFGWCGLTTDYRCEG--CQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYC-DPNYPCRG--KYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAXXPKPS 773
            S   CG+ V    C    CCS  GWCG   DY C G  CQ  C+  V G      G +        +++  +F+ +  +R D  CP++ FY+Y +F+ AA++FPAFG  G+   RKRE+AAF A     T+G   D     +AWG C         +D+C   ++PC    KY  RGPIQLT N NY   G+A+G DL+ NPDL+  DP++SFK+A+WFWM+    KPS
Sbjct:   68 SDHRCGAAVGNPPCGQDRCCSVHGWCGGGNDY-CSGSKCQYRCSSSVRGPRVALSGNSTANSIGNVVVTEPLFDQMFSHRKD--CPSQGFYSYHSFLVAAESFPAFGTIGDVATRKREVAAFLAHISQATSGERSDVEN-PHAWGLCHINTTTVTENDFCTSSDWPCAAGKKYSPRGPIQLTHNFNYGLAGQAIGEDLIQNPDLVEKDPIISFKTALWFWMSQHDNKPS 292          
BLAST of CK934195 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 8.602e-39
Identity = 81/163 (49.69%), Postives = 104/163 (63.80%), Query Frame = 3
Query:  285 LGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRGKYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAXXPKPS 773
            +  +IS  +FE +L +R         FYTYDAFI AAK+FPAF  +G+  +RKRE+AAF AQT HETTGGWP AP G Y        E+G+ S             Y+GRGPIQ+++N NY   G+A+GVDLL NPDL+ +D  + FK+A+WFWMT   PKPS
Sbjct:    1 VSSVISSSLFEKMLLHRG--------FYTYDAFIAAAKSFPAFATTGSTDVRKREVAAFLAQTSHETTGGWPTAPDGPY--------ELGSTSD------------YFGRGPIQISYNYNYGAAGKAIGVDLLRNPDLVTSDNTVEFKTALWFWMTPQSPKPS 135          
BLAST of CK934195 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2)

HSP 1 Score: 159.844 bits (403), Expect = 1.467e-38
Identity = 89/224 (39.73%), Postives = 123/224 (54.91%), Query Frame = 3
Query:  114 AQNCGSGVVCPGGECCSRFGWCGLTTDYRCEGCQSNCNQVVCGECDPDDGTAGD--GGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN---YPCR-GK-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAXXP 764
            +QNCG    C    CCS+FG+CG T  Y   GC+S       G C    GT     GG +G I+++  F  ++       C  + FYT D+FI AA  FP F NS    + +REIA  FA   HET               +C+  E+  AS DYCD N   YPC  GK Y+GRGPIQL+WN NY  CG++L ++LL  P+L++++P ++F++ +WFWM +  P
Sbjct:   24 SQNCG----CAPNLCCSQFGYCGSTDAYCGTGCRS-------GPCRSPGGTPSPPGGGSVGSIVTQAFFNGIINQAGGG-CAGKNFYTRDSFINAANTFPNFANS----VTRREIATMFAHFTHETGH-------------FCYIEEINGASRDYCDENNRQYPCAPGKGYFGRGPIQLSWNYNYGACGQSLNLNLLGQPELVSSNPTVAFRTGLWFWMNSVRP 218          
BLAST of CK934195 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 5.576e-38
Identity = 83/220 (37.73%), Postives = 120/220 (54.55%), Query Frame = 3
Query:  111 SAQNCGSGVVCPGGECCSRFGWCGLTTDYRCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN---YPCRG--KYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTA 755
            +AQNCG    C    CCS+FG+CG T +Y  +GCQS      C       G+ G G  +  +++   F  + + +    C  + FYT  AF+ A K +P F + G++   KREIAAFFA   HET               +C+  E+  +++ YCDP    +PC    KYYGRGP+Q++WN NY   G A+G D L +P  +A D V++FK+A+WFWM +
Sbjct:   19 AAQNCG----CQPNVCCSKFGYCGTTDEYCGDGCQSG----PCRSGRGGGGSGGGGANVASVVTSSFFNGI-KNQAGSGCEGKNFYTRSAFLSAVKGYPGFAHGGSQVQGKREIAAFFAHATHETGH-------------FCYISEINKSNA-YCDPTKRQWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMNS 215          
BLAST of CK934195 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 8.052e-37
Identity = 84/217 (38.71%), Postives = 123/217 (56.68%), Query Frame = 3
Query:  111 SAQNCGSGVVCPGGECCSRFGWCGLTTDYRCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN---YPCR-GK-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFW 746
            +AQ+CG    C   +CCS++G+CG  +DY   GCQ+           P D  A +   +  I++ + F  L+   +D  C A+ FYT DAF+ AA  +P+FG +G+    KREIAAFFA   HET               +C+  E+   S +YCD     +PC  GK YYGRGP+Q++WN NY   G+++G D L +PD +A  PVL+F++A+W+W
Sbjct:   24 AAQSCG----CASDQCCSKWGFCGTGSDYCGTGCQAG----------PCDVPATNDVSVASIVTPEFFAALVAQADDG-CAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKREIAAFFAHANHETIK-------------FCYIEEIDGPSKNYCDETSTQWPCMAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSPVLAFQTALWYW 212          
BLAST of CK934195 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 2.343e-36
Identity = 85/223 (38.12%), Postives = 120/223 (53.81%), Query Frame = 3
Query:  111 SAQNCGSGVVCPGGECCSRFGWCGLTTDYRCEGCQSN-C----NQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN---YPCRG--KYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWM 749
            +AQNCG    C  G CCS++G+CG T  Y  +GCQS  C     +   G      G AG G  +  +++   F  + + +    C  + FYT  +F+ AA+++  F N       KREIAAFFA   HET                C+  E+  A+ DYCD +   +PC+   KYYGRGP+Q++WN NY   G+ +G D L +PD +A DP +SFK+A+WFWM
Sbjct:   26 AAQNCG----CQDGYCCSQWGYCGTTEAYCGQGCQSGPCWGSGGEAAAGMAGRKAG-AGAGVSVESVVTEAFFNGI-KNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFFAHVTHETGH-------------MCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNYGPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWM 229          
The following BLAST results are available for this feature:
BLAST of CK934195 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
CHIT_PETHY7.519e-4354.60Acidic endochitinase OS=Petunia hybrida PE=2 SV=1[more]
CHIP_TOBAC9.820e-4353.99Acidic endochitinase P OS=Nicotiana tabacum PE=1 S... [more]
CHI10_ORYSJ9.820e-4346.99Chitinase 10 OS=Oryza sativa subsp. japonica GN=Ch... [more]
CHIQ_TOBAC1.282e-4253.37Acidic endochitinase Q OS=Nicotiana tabacum PE=1 S... [more]
AGI_URTDI1.418e-4140.17Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE... [more]
CHIT_AVESA8.602e-3949.69Endochitinase (Fragments) OS=Avena sativa PE=1 SV=... [more]
CHI4_BRANA1.467e-3839.73Basic endochitinase CHB4 OS=Brassica napus PE=1 SV... [more]
CHIB_MAIZE5.576e-3837.73Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1[more]
CHI6_ORYSJ8.052e-3738.71Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI4_ORYSJ2.343e-3638.12Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004540_C03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IF_C03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934195 ID=CK934195; Name=CK934195; organism=Citrus sinensis; type=EST; length=775bp
GGGGATACACCAAGCAGAGGATAGTTGATATCATAACTGTTGCTTTCAAA
ATGAGGCTTATTGGGTCCTTACTAATTTTCTCTCTGGTTTTATCTTTTGT
ACTAGGAGGCTCAGCACAGAACTGTGGAAGCGGCGTTGTGTGCCCAGGAG
GGGAGTGTTGTAGTCGATTTGGTTGGTGTGGCCTAACAACAGACTACCGT
TGTGAAGGCTGCCAAAGTAACTGTAATCAGGTTGTTTGCGGTGAATGTGA
TCCCGACGACGGGACGGCTGGCGATGGCGGTGAACTGGGCAAGATCATCT
CAAGGAAGATGTTTGAAGACTTGCTTGAGTATAGAAATGATAAACGATGC
CCTGCCAGATGCTTCTACACTTATGATGCTTTTATAGAGGCAGCCAAAGC
TTTTCCAGCCTTTGGTAATTCTGGAAATGAAACCATGCGTAAAAGAGAAA
TTGCTGCCTTTTTTGCCCAAACTGGCCATGAAACTACTGGGGGATGGCCC
GATGCACCTGGTGGCGAATATGCTTGGGGATATTGCTTTAATAGGGAAGT
TGGTGCTGCGTCGTCCGACTACTGTGATCCTAACTATCCATGTCGAGGGA
AGTACTATGGCCGAGGTCCAATTCAACTCACTTGGAATTGCAATTACTTA
AGGTGCGGAGAAGCCTTGGGGGTGGACTTGTTGAACAATCCAGACCTACT
TGCCACTGATCCAGTACTATCATTCAAGTCAGCAATCTGGTTCTGGATGA
CTGCACNNNCACCAAAGCCATCGTG
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