CK934199

Overview
NameCK934199
Unique NameCK934199
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length718
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10938 contig Csv1_Contig10938:31..748. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934199 vs. ExPASy Swiss-Prot
Match: LAC1_AGABI (Laccase-1 OS=Agaricus bisporus GN=lcc1 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.531e-15
Identity = 51/147 (34.69%), Postives = 70/147 (47.62%), Query Frame = 3
Query:  222 FDFEVSYITASPLGVPQQVIAINGKFPGPTIXXXXXXXXXXXXRNKLDE-----SLLIHWSGIQQRRSSWQDGLLGTN-CPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFII-NNRAIIPIPFDTPDGDITILIGDWY 641
            FDF++     +P G  +  + ING+FPG  I             NKL       S+ IHW G  Q R+S QDG    N CP PP   +TY+F V +Q G+F+Y   L  Q   G  G FI+ + R  +   +D  D    I + +WY
Sbjct:   24 FDFDLVNTRLAPDGFERDTVVINGEFPGTLIQVNKGDSVRIPLHNKLTSPTMRRSVSIHWHGFFQARTSGQDGPSFVNQCPQPPNTTFTYEFSVAEQSGTFWYHSHLSTQYCDGLRGAFIVYDPRDPLRHLYDVDDESTVITLAEWY 170          
BLAST of CK934199 vs. ExPASy Swiss-Prot
Match: LAC7_ARATH (Laccase-7 OS=Arabidopsis thaliana GN=LAC7 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.410e-15
Identity = 48/159 (30.19%), Postives = 74/159 (46.54%), Query Frame = 3
Query:  228 FEVSYITASPLGVPQQVIAINGKFPGPTIXXXXXXXXXXXXRNKLDESLLIHWSGIQQRRSSWQDG-LLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAGEGLGMP 701
            F V  +T S L   Q +  +NG  PGPTI             N    ++ IHW GI  + + W DG  + T CPI P   + Y+F +  Q G+ ++     F RA+  +G  +I  ++    PF  P  ++ IL G+W+  +  AL    +A    G+P
Sbjct:   30 FNVQNLTVSRLCKRQVITVVNGSLPGPTIRVKEGDSLVIHVLNHSPHNITIHWHGIFHKLTVWADGPSMITQCPIQPGQRYAYRFNITGQEGTLWWHAHASFLRAT-VYGALVIRPKSGHSYPFPKPHKEVPILFGEWWNTDVVALE---EAAIATGVP 184          
BLAST of CK934199 vs. ExPASy Swiss-Prot
Match: LAC13_ARATH (Laccase-13 OS=Arabidopsis thaliana GN=LAC13 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.410e-15
Identity = 46/127 (36.22%), Postives = 70/127 (55.12%), Query Frame = 3
Query:  279 IAINGKFPGPTIXXXXXXXXXXXXRNKLDESLLIHWSGIQQRRSSWQDG-LLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIP-IPFDT-PDGDITILIGDWYTRN 650
            I +NG+FPGPT+             NK   ++ +HW GI+Q R+ W DG    T CPI P  ++TY+F ++DQ G+ ++     + RA+  +G  II      P  PF   P  +IT+L+G+W+ RN
Sbjct:   45 ITVNGQFPGPTLEVRNGDSLVITAINKARYNISLHWHGIRQMRNPWADGPEYITQCPIQPGGSYTYRFTMEDQEGTLWWHAHSRWLRAT-VYGALIIRPPLSSPHYPFPVIPKREITLLLGEWWDRN 170          
BLAST of CK934199 vs. ExPASy Swiss-Prot
Match: LAC4_ARATH (Laccase-4 OS=Arabidopsis thaliana GN=IRX12 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 4.453e-15
Identity = 45/168 (26.79%), Postives = 83/168 (49.40%), Query Frame = 3
Query:  219 YFDFEVSYITASPLGVPQQVIAINGKFPGPTIXXXXXXXXXXXXRNKLDESLLIHWSGIQQRRSSWQDG-LLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWY-TRNHTALRKTLDAGEGLGMPDGVLI 716
            ++ F V     + L   +  + +NG++PGPTI             N +  ++ IHW G++Q R+ W DG    T CPI P   +TY + +  Q G+ ++   + + RA+  +G  +I  +  +P PF  PD +  I++G+W+ +     + + L +G    + D  +I
Sbjct:   28 HYKFNVVMKNVTRLCSSKPTVTVNGRYPGPTIYAREDDTLLIKVVNHVKYNVSIHWHGVRQVRTGWADGPAYITQCPIQPGQVYTYNYTLTGQRGTLWWHAHILWLRAT-VYGALVILPKRGVPYPFPKPDNEKVIVLGEWWKSDTENIINEALKSGLAPNVSDSHMI 194          
BLAST of CK934199 vs. ExPASy Swiss-Prot
Match: LAC17_ARATH (Laccase-17 OS=Arabidopsis thaliana GN=LAC17 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.453e-15
Identity = 44/168 (26.19%), Postives = 82/168 (48.81%), Query Frame = 3
Query:  219 YFDFEVSYITASPLGVPQQVIAINGKFPGPTIXXXXXXXXXXXXRNKLDESLLIHWSGIQQRRSSWQDG-LLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTA-LRKTLDAGEGLGMPDGVLI 716
            ++  E+     + L   + ++++NG+FPGP +             N++  ++ +HW GI+Q RS W DG    T CPI    ++ Y + +  Q G+ +Y   + + R S  +G  II  +  +P PF  P  ++ ++ G+W+  +  A +R+    G G  + D   I
Sbjct:   26 HYTLEIKMQNVTRLCHTKSLVSVNGQFPGPKLIAREGDQVLIKVVNQVPNNISLHWHGIRQLRSGWADGPAYITQCPIQTGQSYVYNYTIVGQRGTLWYHAHISWLR-STVYGPLIILPKRGVPYPFAKPHKEVPMIFGEWFNADTEAIIRQATQTGGGPNVSDAYTI 192          
BLAST of CK934199 vs. ExPASy Swiss-Prot
Match: LAC4_ORYSJ (Laccase-4 OS=Oryza sativa subsp. japonica GN=LAC4 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.596e-15
Identity = 41/168 (24.40%), Postives = 81/168 (48.21%), Query Frame = 3
Query:  219 YFDFEVSYITASPLGVPQQVIAINGKFPGPTIXXXXXXXXXXXXRNKLDESLLIHWSGIQQRRSSWQDG-LLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRN-HTALRKTLDAGEGLGMPDGVLI 716
            +++F V    A+ L   + ++ +NG+ PGP +             N +  ++ +HW G++Q R+ W DG    T CPI    ++ Y F V  Q G+ ++   + + RA+  +G  +I  +  +P PF  P  ++ ++ G+W+  +    + + +  G G  + D   I
Sbjct:   32 HYEFNVQMANATRLCNTKSMVTVNGQCPGPELVAREGDRVVIRVTNNVAHNISLHWHGVRQVRTGWADGPAYITQCPIQTGQSYVYNFTVAGQRGTLWWHAHISWLRAT-VYGALVILPKLGVPYPFPAPHKEVPVIFGEWWNADTEEVVNQAVQTGGGPNVSDAFTI 198          
BLAST of CK934199 vs. ExPASy Swiss-Prot
Match: LAC2_THACU (Laccase-2 OS=Thanatephorus cucumeris GN=LCC2 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.596e-15
Identity = 50/161 (31.06%), Postives = 76/161 (47.20%), Query Frame = 3
Query:  216 VYFDFEVSYITASPLGVPQQVIAINGKFPGPTIXXXXXXXXXXXXRNKLDE-----SLLIHWSGIQQRRSSWQDG-LLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFII-NNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLD 677
            V + F+V+    +P GV +  + +NG+FPGP I            RNKL +     S  IHW G+ Q R++ +DG    T CPIPP+ ++TY   + +Q G+++Y   L  Q   G  G  +I +        +D  D      + DWY     A+  T D
Sbjct:   22 VDYGFDVANGAVAPDGVTRNAVLVNGRFPGPLITANKGDTLKITVRNKLSDPTMRRSTTIHWHGLLQHRTAEEDGPAFVTQCPIPPQESYTYTMPLGEQTGTYWYHSHLSSQYVDGLRGPIVIYDPHDPYRNYYDVDDERTVFTLADWYHTPSEAIIATHD 182          
BLAST of CK934199 vs. ExPASy Swiss-Prot
Match: LAC9_ARATH (Laccase-9 OS=Arabidopsis thaliana GN=LAC9 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.692e-14
Identity = 45/137 (32.85%), Postives = 66/137 (48.18%), Query Frame = 3
Query:  234 VSYITASPLGVPQQVIAINGKFPGPTIXXXXXXXXXXXXRNKLDESLLIHWSGIQQRRSSWQDGL-LGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWY 641
            V  +  +PL   Q +  +NG  PGPTI             NK   ++ IHW G+ Q +S W DG  + T CPI P  N+TYQF +  Q G+  +   +   RA+   G  II  R+  P PF  P  ++ ++   W+
Sbjct:   34 VKDVVVTPLCKEQMIPIVNGSLPGPTINVREGDTLVVHVINKSTYNVTIHWHGVFQLKSVWMDGANMITQCPIQPSNNFTYQFDITGQEGTLLWHAHVVNLRAT-IHGALIIRPRSGRPYPFPKPYKEVPLIFQQWW 169          
BLAST of CK934199 vs. ExPASy Swiss-Prot
Match: LAC6_ORYSJ (Laccase-6 OS=Oryza sativa subsp. japonica GN=LAC6 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.692e-14
Identity = 42/130 (32.31%), Postives = 66/130 (50.77%), Query Frame = 3
Query:  276 VIAINGKFPGPTIXXXXXXXXXXXXRNKLDESLLIHWSGIQQRRSSWQDG-LLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTAL 662
            V A+NG+ PGP +             N    ++ +HW G+ QR + W DG  + T CPI P   +TY+F V  Q G+ ++     + RA+  +G  +I  R     PF TP  + T+L+G+W+  +  AL
Sbjct:   47 VTAVNGRVPGPQVEAREGDTVVIHVINDSPYNVTVHWHGVFQRGTPWADGPAMVTQCPIRPGHRYTYRFAVAGQEGTLWWHAHSSYMRAT-VYGALVIRPRRAGGYPFPTPYEEKTVLLGEWWNGDPVAL 175          
BLAST of CK934199 vs. ExPASy Swiss-Prot
Match: LAC2_AGABI (Laccase-2 OS=Agaricus bisporus GN=lcc2 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.692e-14
Identity = 47/147 (31.97%), Postives = 69/147 (46.94%), Query Frame = 3
Query:  222 FDFEVSYITASPLGVPQQVIAINGKFPGPTIXXXXXXXXXXXXRNKLDESLL-----IHWSGIQQRRSSWQDGLLGTN-CPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFII-NNRAIIPIPFDTPDGDITILIGDWY 641
            F+F++     +P G  +  + ING+FPG  +             NKL  S +     IHW G  Q R+S QDG    N CP PP   +TY+F V D+ G+F+Y   L  Q   G  G F++ +    +   +D  D    I + +WY
Sbjct:   24 FNFDLVNTRLAPDGFERDTVVINGEFPGTLVQVNKGDSVRIPVNNKLTSSTMRRSVSIHWHGFFQARTSGQDGPAFVNQCPQPPNTTFTYEFSVADESGTFWYHSHLSTQYCDGLRGAFVVYDPEDPLGHLYDVDDETTVITLAEWY 170          
The following BLAST results are available for this feature:
BLAST of CK934199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
LAC1_AGABI1.531e-1534.69Laccase-1 OS=Agaricus bisporus GN=lcc1 PE=1 SV=1[more]
LAC7_ARATH3.410e-1530.19Laccase-7 OS=Arabidopsis thaliana GN=LAC7 PE=2 SV=... [more]
LAC13_ARATH3.410e-1536.22Laccase-13 OS=Arabidopsis thaliana GN=LAC13 PE=2 S... [more]
LAC4_ARATH4.453e-1526.79Laccase-4 OS=Arabidopsis thaliana GN=IRX12 PE=2 SV... [more]
LAC17_ARATH4.453e-1526.19Laccase-17 OS=Arabidopsis thaliana GN=LAC17 PE=2 S... [more]
LAC4_ORYSJ7.596e-1524.40Laccase-4 OS=Oryza sativa subsp. japonica GN=LAC4 ... [more]
LAC2_THACU7.596e-1531.06Laccase-2 OS=Thanatephorus cucumeris GN=LCC2 PE=2 ... [more]
LAC9_ARATH1.692e-1432.85Laccase-9 OS=Arabidopsis thaliana GN=LAC9 PE=2 SV=... [more]
LAC6_ORYSJ1.692e-1432.31Laccase-6 OS=Oryza sativa subsp. japonica GN=LAC6 ... [more]
LAC2_AGABI1.692e-1431.97Laccase-2 OS=Agaricus bisporus GN=lcc2 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004540_C07 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IF_C07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934199 ID=CK934199; Name=CK934199; organism=Citrus sinensis; type=EST; length=718bp
TTTTTTTTTTTTTTTCTTTTTTTTTGGGCGGGGGGGGTTTGATAATGTAA
TACCCAGGTAAAAAGCTGAAGGAATTTTTGCTCTAAATTTGTTCAAAAGA
CGCCCAAAGTTGGAAAAAGAAAAAGATTCACAAAATGGCTTTGTGTAGAG
GCTTATCTTTGTTGGCTATCCACATTGCCTTGCTCGCGAGCTTGTGTTCT
GCTGCAGATCTGTTTGTTTACTTCGACTTTGAGGTTTCTTATATCACTGC
TTCTCCTCTTGGTGTGCCCCAGCAGGTTATTGCTATTAACGGCAAGTTTC
CAGGTCCGACTATAAATGTGACTACTAACAACAATGTCGTTGTCAATGTG
AGAAACAAATTAGACGAAAGTCTACTTATCCACTGGTCTGGCATTCAACA
AAGGCGTAGCTCATGGCAAGATGGACTTTTGGGCACCAATTGTCCCATTC
CTCCAAAGTGGAACTGGACTTACCAGTTTCAGGTTAAGGACCAAGTTGGA
AGTTTCTTTTACTTCCCATCCCTCCATTTTCAGAGAGCATCGGGCGGTTT
CGGTGGCTTTATAATTAACAACCGAGCTATTATTCCAATTCCTTTTGATA
CCCCAGATGGGGATATTACAATTTTGATTGGCGATTGGTACACGAGGAAC
CACACGGCTCTGAGAAAGACACTTGATGCTGGGGAAGGTCTAGGAATGCC
AGATGGGGTGCTAATCAA
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