CK934230
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934230 vs. ExPASy Swiss-Prot
Match: SKP1_BOVIN (S-phase kinase-associated protein 1 OS=Bos taurus GN=SKP1 PE=2 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.911e-40 Identity = 88/159 (55.35%), Postives = 107/159 (67.30%), Query Frame = 2 Query: 158 ITLKSSDGEAFEVDEAVALESQTIKHMIED-----DCADNGIPLPNVTSKILSKVIEYCKKHVE--ASKSDDRATSGVDDDLKAWDTDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDLTPXXXXXXXXXNQWAFE 613 I L+SSDGE FEVD +A +S TIK M+ED + D+ +PLPNV + IL KVI++C H + DD DD+ WD +F+KVDQ TLF+LILAANYL+IK LLD+TC+TVA+MIKGKTPEEIRKTFNIKND T NQW E Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
BLAST of CK934230 vs. ExPASy Swiss-Prot
Match: ASK16_ARATH (SKP1-like protein 16 OS=Arabidopsis thaliana GN=ASK16 PE=1 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 8.712e-40 Identity = 92/171 (53.80%), Postives = 113/171 (66.08%), Query Frame = 2 Query: 146 TSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHV--EASKSDD--RATS-----GVDDDLKAWDTDFVK-VDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDLTPXXXXXXXXXNQWAFE*KDLK 628 +S KI L SSD E+FEV+EAVA + + I HMI+DDCAD IPL NVT IL+ VIEYCKKHV + SDD ATS ++L+ WD +F+K D T+ LILA NYLN++ LL LTCQTVAD +K +PEE+R+ FNI+ND TP N WAFE DLK Sbjct: 2 SSNKIVLTSSDDESFEVEEAVARKLKVIAHMIDDDCADKAIPLENVTGNILALVIEYCKKHVLDDVDDSDDSTEATSENVNEEAKNELRTWDAEFMKEFDMETVMKLILAVNYLNVQDLLGLTCQTVADHMKDMSPEEVRELFNIENDYTPEEEDAIRKENAWAFE--DLK 170
BLAST of CK934230 vs. ExPASy Swiss-Prot
Match: SKP1A_DICDI (SCF ubiquitin ligase complex protein SKP1a OS=Dictyostelium discoideum GN=fpaA PE=1 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.535e-39 Identity = 84/152 (55.26%), Postives = 110/152 (72.37%), Query Frame = 2 Query: 158 ITLKSSDGEAFEVDEAVALESQTIKHMIED-DCADNGIPLPNVTSKILSKVIEYCKKHVE--ASKSDDRATSGVDDDLKAWDTDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDLTPXXXXXXXXXNQW 604 + L+SSD + FE+++ +A S TIK+MIED +D+ IPLPNVTS IL KV++YC+ H + + + DD+ DD+ +D DF KVDQ TLF+LILAANYL+IK LLD+TC+TVA+MI+GKTPEEIRK FNIKND TP N+W Sbjct: 4 VKLESSDEKVFEIEKEIACMSVTIKNMIEDIGESDSPIPLPNVTSTILEKVLDYCRHHHQHPSPQGDDKKDEKRLDDIPPYDRDFCKVDQPTLFELILAANYLDIKPLLDVTCKTVANMIRGKTPEEIRKIFNIKNDFTPEEEEQIRKENEW 155
BLAST of CK934230 vs. ExPASy Swiss-Prot
Match: SKP1B_DICDI (SCF ubiquitin ligase complex protein SKP1b OS=Dictyostelium discoideum GN=fpaB-1 PE=1 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 5.647e-39 Identity = 84/152 (55.26%), Postives = 109/152 (71.71%), Query Frame = 2 Query: 158 ITLKSSDGEAFEVDEAVALESQTIKHMIED-DCADNGIPLPNVTSKILSKVIEYCKKHVE--ASKSDDRATSGVDDDLKAWDTDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDLTPXXXXXXXXXNQW 604 + L+SSD + FE+++ +A S TIK+MIED +D IPLPNVTS IL KV++YC+ H + + + DD+ DD+ +D DF KVDQ TLF+LILAANYL+IK LLD+TC+TVA+MI+GKTPEEIRK FNIKND TP N+W Sbjct: 4 VKLESSDEKVFEIEKEIACMSVTIKNMIEDIGESDAPIPLPNVTSTILEKVLDYCRHHHQHPSPQGDDKKDEKRLDDIPPYDRDFCKVDQPTLFELILAANYLDIKPLLDVTCKTVANMIRGKTPEEIRKIFNIKNDFTPEEEEQIRKENEW 155
BLAST of CK934230 vs. ExPASy Swiss-Prot
Match: ASK19_ARATH (SKP1-like protein 19 OS=Arabidopsis thaliana GN=ASK19 PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.258e-38 Identity = 90/189 (47.62%), Postives = 112/189 (59.26%), Query Frame = 2 Query: 146 TSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHVE----------------------ASKSDD----RATSGVD------DDLKAWDTDFVK-VDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDLTPXXXXXXXXXNQWAFE 613 +SKKI L SSDGE+F+V+E VA + Q + H+IEDDCA N IP+PNVT +IL+KVIEYCKKHVE K DD +T G D + L WD F+K D T+FD+ILAANYLN++ L DL +T+AD IK TPEE+R+ FNI+ND TP N W FE Sbjct: 2 SSKKIVLTSSDGESFKVEEVVARKLQIVGHIIEDDCATNKIPIPNVTGEILAKVIEYCKKHVEDDDDVVETHESSTKGDKTVEEAKKKPDDVAVPESTEGDDEAEDKKEKLNEWDAKFMKDFDIKTIFDIILAANYLNVQGLFDLCSKTIADYIKDMTPEEVRELFNIENDFTPEEEEAIRNENAWTFE 190
BLAST of CK934230 vs. ExPASy Swiss-Prot
Match: ASK8_ARATH (SKP1-like protein 8 OS=Arabidopsis thaliana GN=ASK8 PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 6.244e-38 Identity = 82/156 (52.56%), Postives = 107/156 (68.59%), Query Frame = 2 Query: 146 TSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHVEASKSDDRATSGVDDDLKAWDTDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDLTPXXXXXXXXXNQWAFE 613 ++KKI LKSS+G+ FE++E A + QTI HMIE +C DN I + +TS+IL VIEYC KH D A DDDL+ WD +F++ D++T+F L AAN+LN KSLL L QTVADMIKG TP+++R+ FNI+NDLTP N+WAFE Sbjct: 2 STKKIMLKSSEGKTFEIEEETARQCQTIAHMIEAECTDNVILVLKMTSEILEMVIEYCNKH-----HVDAANPCSDDDLEKWDKEFMEKDKSTIFALTNAANFLNNKSLLHLAGQTVADMIKGNTPKQMREFFNIENDLTPEEEAAIRRENKWAFE 152
BLAST of CK934230 vs. ExPASy Swiss-Prot
Match: ASK18_ARATH (SKP1-like protein 18 OS=Arabidopsis thaliana GN=ASK18 PE=1 SV=2) HSP 1 Score: 153.68 bits (387), Expect = 1.177e-36 Identity = 81/156 (51.92%), Postives = 99/156 (63.46%), Query Frame = 2 Query: 146 TSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHVEASKSDDRATSGVDDDLKAWDTDFV-KVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDLTPXXXXXXXXXNQWAF 610 +S KI L SSDGE+FE+DEAVA + I HM+ED+CA IPL NVT ILSK+IEY K HV +D +L +WD F+ K+D T+F +ILAANYLN + LL QTVAD IK KTPEE+R+ FNI+ND TP N W F Sbjct: 2 SSNKILLTSSDGESFEIDEAVARKFLIIVHMMEDNCAGEAIPLENVTGDILSKIIEYAKMHVNEPSEEDE-DEEAKKNLDSWDAKFMEKLDLETIFKIILAANYLNFEGLLGFASQTVADYIKDKTPEEVREIFNIENDFTPEEEEEIRKENAWTF 156
BLAST of CK934230 vs. ExPASy Swiss-Prot
Match: ASK17_ARATH (SKP1-like protein 17 OS=Arabidopsis thaliana GN=ASK17 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.545e-33 Identity = 76/156 (48.72%), Postives = 98/156 (62.82%), Query Frame = 2 Query: 146 TSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHVEASKSDDRATSGVDDDLKAWDTDFVK-VDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDLTPXXXXXXXXXNQWAF 610 +SKKI L SSD E FE+DEAVA + Q + HMI+DDCAD I L NVT KIL+ +IEYCKKHV+ ++ ++ WD +FVK +D TLF L+ AA+YL + L +L Q +AD KT EIR+ FNI+ND TP N+WAF Sbjct: 2 SSKKIVLTSSDDECFEIDEAVARKMQMVAHMIDDDCADKAIRLQNVTGKILAIIIEYCKKHVDDVEA--------KNEFVTWDAEFVKNIDMDTLFKLLDAADYLIVIGLKNLIAQAIADYTADKTVNEIRELFNIENDYTPEEEEELRKKNEWAF 149
BLAST of CK934230 vs. ExPASy Swiss-Prot
Match: SKP1_SCHPO (Suppressor of kinetochore protein 1 OS=Schizosaccharomyces pombe GN=skp1 PE=1 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 6.047e-33 Identity = 76/156 (48.72%), Postives = 99/156 (63.46%), Query Frame = 2 Query: 155 KITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADN-GIPLPNVTSKILSKVIEYCKKHVEASKSDDRATSGV----DDDLKAWDTDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDLTPXXXXXXXXXNQWA 607 KI L SSD E F VD+ +A S IK+M+ED N IPLPNV+S +L KV+E+C+ H S S + D+ WD F+ VDQ LF+++LA+NYL+IK LLD C+TVA+MI+GK+PE+IRKTFNI ND TP N+WA Sbjct: 3 KIKLISSDNEEFVVDQLIAERSMLIKNMLEDVGEINVPIPLPNVSSNVLRKVLEWCEHHKNDLYSGTEEESDIRLKKSTDIDEWDRKFMAVDQEMLFEIVLASNYLDIKPLLDTGCKTVANMIRGKSPEDIRKTFNIPNDFTPEEEEQIRKENEWA 158
BLAST of CK934230 vs. ExPASy Swiss-Prot
Match: ASK7_ARATH (SKP1-like protein 7 OS=Arabidopsis thaliana GN=ASK7 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 4.485e-28 Identity = 67/121 (55.37%), Postives = 84/121 (69.42%), Query Frame = 2 Query: 146 TSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHVEASKSDDRATSGVDDDLKAWDTDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMI 508 ++KKI LKSSDG+ FE++E A + QTI HMIE +C DN IP+ NVTS+IL VIEYC KH D A D+DLK WD +F++ DQ T+F L+ AA L+IKSLL L QTVADM+ Sbjct: 2 STKKIMLKSSDGKMFEIEEETARQCQTIAHMIEAECTDNVIPVSNVTSEILEMVIEYCNKH-----HVDAANPCSDEDLKKWDKEFMEKDQYTIFHLMNAAYDLHIKSLLALAYQTVADMV 117 The following BLAST results are available for this feature:
BLAST of CK934230 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934230 ID=CK934230; Name=CK934230; organism=Citrus sinensis; type=EST; length=824bpback to top |