CK934285

Overview
NameCK934285
Unique NameCK934285
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length595
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CK934285 vs. ExPASy Swiss-Prot
Match: PSBK_CYAP4 (Photosystem II reaction center protein K OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=psbK PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.065e-11
Identity = 30/40 (75.00%), Postives = 35/40 (87.50%), Query Frame = 1 
Query:  415 LFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 534
            LFAKLPEAY+  +P+VDV+PVIPVLF  LAFVWQA+V FR
Sbjct:    6 LFAKLPEAYSIFDPLVDVLPVIPVLFLALAFVWQASVGFR 45
The following BLAST results are available for this feature:
BLAST of CK934285 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
PSBK_CYAP48.065e-1175.00Photosystem II reaction center protein K OS=Cyanot... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004261_A07 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IVF_A07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934285 ID=CK934285; Name=CK934285; organism=Citrus sinensis; type=EST; length=595bp
TTCAATTTCGATTTGGTACTAATAAAGAGTACCAGTGGTATTGGCTGTTC
GTCAATTCCAGTCCAAAGCCCCAAAATTCGATTCTGATTTTAGTGTTAGG
ATTTTGACACATATAGGTGTAAAATACAACTTAATTTATTGATCATTACA
TAGAATTCAATTAAGATATTGTATGAAAGTATGATTTCTTCAATTCTCAC
ACGAGAATAGAAGGATTTTTGTTTTGATTGGGTCGGTTCCAAGAAGTTTT
TTTTGTCTACCTTACTTTCTTTTCTTCATTTTTATCTTATATCAATAAGA
TATTAATAACTCAATCAAAATAAAATTATCTCCAAGAACAAAATGTTTGT
TATGCTTAATATCTTTAGTTTAATGTATATCTGTCTTAATTCTGCCCTTT
ATTCGAGTAGTTTTTTATTCGCTAAATTACCCGAGGCCTACGCTTTTTTG
AATCCAATTGTAGATGTTATGCCAGTAATACCTGTTCTATTTTTTCTCTT
AGCCTTTGTTTGGCAAGCTGCTGTAAGTTTTCGATAAGATCTTTAATATT
GTGCTAGAAAAATTCATGATTTATTCTAGTTCGAAAAAAAAAAAA
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