CK934328

Overview
NameCK934328
Unique NameCK934328
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length634
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934328 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.064e-43
Identity = 77/155 (49.68%), Postives = 104/155 (67.10%), Query Frame = 2
Query:  182 SREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDP----NYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWM 634
            +  MF+ +L  RN++ CP +GFYTYDA+  A + +PGFG +G++  RKRE+AAFFAQT  ET+G         + WGYC ++E++P SDYCDP    +YPC   YYGRGP+QL WNYNY  C           + P+ +ATDPVLSF++A+WFWM
Sbjct:   68 TESMFEQMLPNRNNDSCPGKGFYTYDAYFVATEFYPGFGMTGDDDTRKRELAAFFAQTSQETSGRSIIGEDAPFTWGYCLVNELNPNSDYCDPKTKSSYPCVADYYGRGPLQLRWNYNYGEC--GNYLGQNLLDEPEKVATDPVLSFEAALWFWM 220          
BLAST of CK934328 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.441e-42
Identity = 79/155 (50.97%), Postives = 103/155 (66.45%), Query Frame = 2
Query:  170 GKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPNYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWM 634
            G I++RE+F+ +L +RN++ CPA+GFYTYDAFI AA +FPGFG +G++T RK+EIAAFF QT HET GG      G +  GYCF+ ++               +YYGRGPIQL+   NY R            NNPDL+ATDP++SFK+AIWFWM
Sbjct:   28 GSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTAGDDTARKKEIAAFFGQTSHETNGG----SAGTFTGGYCFVKQIEQSD-----------RYYGRGPIQLTHQSNYERAGQGIGVGQELVNNPDLVATDPIISFKTAIWFWM 167          
BLAST of CK934328 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2)

HSP 1 Score: 170.244 bits (430), Expect = 7.665e-42
Identity = 85/163 (52.15%), Postives = 104/163 (63.80%), Query Frame = 2
Query:  167 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNET-MRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPS--DYCDPN--YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWM 634
            +  I+SR +FD +L +RND  CPA  FYTYDAF+ AA AFPGF  +G +    KRE+AAF AQT HETTGGW  AP G YAWGYCF  E    +  DYC  +  +PC    KYYGRGPIQLS+N+NY               +PDL+A+D  +SF +A WFWM
Sbjct:   81 VASIVSRSLFDQMLLHRNDAACPASNFYTYDAFVAAASAFPGFAAAGGDADTNKREVAAFLAQTSHETTGGWATAPDGPYAWGYCFKEENGGAAGPDYCQQSAQWPCAAGKKYYGRGPIQLSYNFNY--GPAGQAIGADLLGDPDLVASDATVSFDTAFWFWM 241          
BLAST of CK934328 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.001e-41
Identity = 80/155 (51.61%), Postives = 105/155 (67.74%), Query Frame = 2
Query:  170 GKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPNYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWM 634
            G I++RE+F+ +L +RN++ CPA+GFYTYDAFI AA +FPGFG +G++T RK+EIAAFF QT HET GG      G +  GYCF+ ++    D  D       +YYGRGPIQL+   NY R            NNPDL+ATDP++SF++AIWFWM
Sbjct:   28 GSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETKGG----SAGTFTGGYCFVRQI----DQSD-------RYYGRGPIQLTHQSNYERAGQGIGVGQDLVNNPDLVATDPIISFRTAIWFWM 167          
BLAST of CK934328 vs. ExPASy Swiss-Prot
Match: CHI11_ORYSJ (Chitinase 11 OS=Oryza sativa subsp. japonica GN=Cht11 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 4.968e-41
Identity = 81/156 (51.92%), Postives = 105/156 (67.31%), Query Frame = 2
Query:  167 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPNYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWM 634
            +G II+R MF+ +L +R D+ C    FYTYDAFI+AA  FP FG +GN+  R+RE+AAFF QT HETTGGW  AP G +AWGYC ++E++P     DP       YYGRGPIQL+  YNY              NNPDL+++DPV++F++AIWFWM
Sbjct:   27 VGSIITRAMFESMLSHRGDQGCQG-AFYTYDAFIKAAGDFPRFGTTGNDETRRRELAAFFGQTSHETTGGWATAPDGPFAWGYCRVNEITP----SDP------PYYGRGPIQLTHKYNYQ--LAGDALGLDLVNNPDLVSSDPVVAFRTAIWFWM 169          
BLAST of CK934328 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.036e-38
Identity = 80/157 (50.96%), Postives = 105/157 (66.88%), Query Frame = 2
Query:  164 ELGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPNYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWM 634
            ++G I++ ++F+++L+ RND+RCPA+GFYTYDAFI AA +FPGFG +G++T RK+EIAAFF QT HETTGG   A  G +A GYCF+ E +               +YGRGPIQL+   NY              NNPDL+ATD  +SFK+AIWFWM
Sbjct:   18 DVGTIVTSDLFNEMLKNRNDDRCPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGSLSA-DGPFAGGYCFVREGNQMG----------SGFYGRGPIQLTGQSNY--DLAGQAIGQDLVNNPDLVATDATVSFKTAIWFWM 161          
BLAST of CK934328 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.767e-38
Identity = 74/162 (45.68%), Postives = 101/162 (62.35%), Query Frame = 2
Query:  167 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCD------PNYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWM 634
            +  I+S +++  L  +++D  CPARGFYTY +F+ AA  FP F  +G    RKRE+AAF AQ  HETTGGW  AP G YAWG C+  E++P S YCD      P YP +  Y+GRGPIQ+SWN+NY               NP+++A    ++F++A+WFWM
Sbjct:   49 VSSIVSEQLYASLFLHKDDAACPARGFYTYASFVRAATRFPRFAATGCADARKREVAAFLAQISHETTGGWATAPDGPYAWGLCYKEEINPQSSYCDATDKQWPCYPGK-SYHGRGPIQISWNFNY--GPAGQALGFDGLRNPEIVANCSDIAFQTALWFWM 207          
BLAST of CK934328 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.014e-38
Identity = 80/156 (51.28%), Postives = 104/156 (66.67%), Query Frame = 2
Query:  167 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPNYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWM 634
            +G I++ ++F+++L+ RND RCPA GFYTYDAFI AA +FPGFG SG++T R++EIAAFF QT HETTGG   A    +  GYCF+ +    +D  D       +YYGRGPIQL+   NY +            NNPDL+ATD  +SFK+AIWFWM
Sbjct:   27 IGSIVTNDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTSGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQ----NDQSD-------RYYGRGPIQLTNQNNYEKA--GNAIRQDLVNNPDLVATDATISFKTAIWFWM 167          
BLAST of CK934328 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 8.770e-38
Identity = 79/156 (50.64%), Postives = 104/156 (66.67%), Query Frame = 2
Query:  167 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPNYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWM 634
            +G I++ ++F+++L+ RND RCPA GFYTYDAFI AA +FPGFG +G++T R++EIAAFF QT HETTGG   A    +  GYCF+ +    +D  D       +YYGRGPIQL+   NY +            NNPDL+ATD  +SFK+AIWFWM
Sbjct:   27 IGSIVTSDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTTGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQ----NDQSD-------RYYGRGPIQLTNRNNYEKA--GTAIGQELVNNPDLVATDATISFKTAIWFWM 167          
BLAST of CK934328 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.552e-37
Identity = 81/156 (51.92%), Postives = 101/156 (64.74%), Query Frame = 2
Query:  167 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPNYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWM 634
            +G I++ ++FD +L+ RND RC A  FYTYDAFI AA +FPGFG +G++T RK+EIAAFF QT HETTGG   +P G YA GYCF+ E +   +           YYGRGPIQL+   NY              NNPDL+ATD  +SFK+AIWFWM
Sbjct:   26 VGSIVTSDLFDQMLKNRNDARCFAVRFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGG-TLSPDGPYAGGYCFLREGNQMGN----------GYYGRGPIQLTGQSNY--DLAGKAIEQDLVNNPDLVATDATVSFKTAIWFWM 168          
The following BLAST results are available for this feature:
BLAST of CK934328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
CHI8_POPTR4.064e-4349.68Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 ... [more]
CHIA_SOLLC3.441e-4250.97Acidic 26 kDa endochitinase OS=Solanum lycopersicu... [more]
CHI12_ORYSJ7.665e-4252.15Chitinase 12 OS=Oryza sativa subsp. japonica GN=Ch... [more]
CHIA_SOLCI1.001e-4151.61Acidic endochitinase pcht28 OS=Solanum chilense PE... [more]
CHI11_ORYSJ4.968e-4151.92Chitinase 11 OS=Oryza sativa subsp. japonica GN=Ch... [more]
CHIB_SOLLC1.036e-3850.96Acidic 27 kDa endochitinase OS=Solanum lycopersicu... [more]
CHI10_ORYSJ1.767e-3845.68Chitinase 10 OS=Oryza sativa subsp. japonica GN=Ch... [more]
CHIP_TOBAC3.014e-3851.28Acidic endochitinase P OS=Nicotiana tabacum PE=1 S... [more]
CHIQ_TOBAC8.770e-3850.64Acidic endochitinase Q OS=Nicotiana tabacum PE=1 S... [more]
CHIT_PETHY2.552e-3751.92Acidic endochitinase OS=Petunia hybrida PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004260_E09 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IIIF_E09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934328 ID=CK934328; Name=CK934328; organism=Citrus sinensis; type=EST; length=634bp
GGGGATAATTGATATCATAACTGTTGCTTTCAAAATGAGGCTTATTGGGT
CCTTACTAATTTTCTCTCTAGTTTTATCTTTTGTACTAGGAGGCTCAGCA
CAGAACTGTGGAAGCGGCGTTGTGTACGGTGGACGTGATACCGGCCATGG
GACGCATGGCGGTGAACTGGGCAAGATCATCTCAAGGGAGATGTTTGATG
ACTTGCTTGAGTATAGAAATGATGAACGATGCCCTGCCAGAGGCTTCTAC
ACTTATGATGCTTTTATAGAGGCAGCCCAAGCTTTTCCAGGCTTTGGTAA
CTCTGGAAATGAAACCATGCGTAAAAGAGAAATCGCTGCCTTTTTTGCCC
AAACTGGCCATGAAACTACTGGGGGATGGCCCGATGCACCTGGTGGCGAA
TATGCTTGGGGATATTGCTTTATAAGCGAAGTTAGCCCTCCGTCCGACTA
CTGTGATCCTAACTATCCATGTCGAGGGAAGTACTATGGCCGAGGTCCAA
TTCAACTCTCTTGGAATTACAATTACTTACGGTGCGGAGAAGGCCTAGGG
CTAGGAGAGGAGTTGTTGAACAATCCAGACCTTCTTGCTACTGATCCAGT
ACTATCATTCAAGTCAGCAATCTGGTTCTGGATG
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