CK934342

Overview
NameCK934342
Unique NameCK934342
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length890
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934342 vs. ExPASy Swiss-Prot
Match: HOX27_ORYSJ (Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp. japonica GN=HOX27 PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 5.208e-41
Identity = 102/197 (51.78%), Postives = 119/197 (60.41%), Query Frame = 3
Query:  363 SESCRAETRSFLRGIDVNRLPSHA-------DNEEEXXXXXXXXXXXXXXGKRSEREPNGDELE---------------MERACSRGISDDEDGDTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKLSPQFYMQM 887
            SE+ R+E  +  RG DVNR PS A       D+EE               G     + +G  L                 ER+ SR  SDD++G ++RKKLRLSK+QSA LEESFKEH+TLNP           LRPRQVEVWFQNRRARTKLKQTEVDCE+LKRCCE LTEENRRL KE+ ELRALK +  FYM +
Sbjct:   79 SETGRSEAAA--RGFDVNRAPSVAAGAPGMEDDEEGPGAAPALSSSPNDSGGSFPLDLSGQGLRGHAEAAAQGGGGGGGGERSSSRA-SDDDEGASARKKLRLSKEQSAFLEESFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLHKELAELRALKTARPFYMHL 272          
BLAST of CK934342 vs. ExPASy Swiss-Prot
Match: HOX27_ORYSI (Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp. indica GN=HOX27 PE=2 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 6.801e-41
Identity = 102/197 (51.78%), Postives = 119/197 (60.41%), Query Frame = 3
Query:  363 SESCRAETRSFLRGIDVNRLPSHA-------DNEEEXXXXXXXXXXXXXXGKRSEREPNGDELE---------------MERACSRGISDDEDGDTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKLSPQFYMQM 887
            SE+ R+E  +  RG DVNR PS A       D+EE               G     + +G  L                 ER+ SR  SDD++G ++RKKLRLSK+QSA LEESFKEH+TLNP           LRPRQVEVWFQNRRARTKLKQTEVDCE+LKRCCE LTEENRRL KE+ ELRALK +  FYM +
Sbjct:   79 SETGRSEAAA--RGFDVNRAPSVAAGAPGMEDDEEGPGAAPALSSSPNDSGGSFPLDLSGHGLRGHAEAAAQGGGGGGGGERSSSRA-SDDDEGASARKKLRLSKEQSAFLEESFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLHKELAELRALKTARPFYMHL 272          
BLAST of CK934342 vs. ExPASy Swiss-Prot
Match: HOX1_ORYSJ (Homeobox-leucine zipper protein HOX1 OS=Oryza sativa subsp. japonica GN=HOX1 PE=1 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 4.409e-40
Identity = 94/171 (54.97%), Postives = 107/171 (62.57%), Query Frame = 3
Query:  393 FLRGIDVNRLP------------SHADNEEEXXXXXXXXXXXXXXGKRSEREPNGDELEMERACSRGISDDED-GDTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKLS 866
            FLRGIDVNR P            S ++ +EE              GKR              A +   SDDED G  SRKKLRLSKDQ+A+LE++FKEHNTLNP           L+PRQVEVWFQNRRARTKLKQTEVDCE LKRCCE LT+ENRRL +E+QELRALKL+
Sbjct:   85 FLRGIDVNRAPAAETTTTTARGPSCSEEDEEPGASSPNSTLSSLSGKRGAPSA-------ATAAAAAASDDEDSGGGSRKKLRLSKDQAAVLEDTFKEHNTLNPKQKAALARQLNLKPRQVEVWFQNRRARTKLKQTEVDCELLKRCCETLTDENRRLHRELQELRALKLA 248          
BLAST of CK934342 vs. ExPASy Swiss-Prot
Match: HOX1_ORYSI (Homeobox-leucine zipper protein HOX1 OS=Oryza sativa subsp. indica GN=HOX1 PE=1 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 4.409e-40
Identity = 94/171 (54.97%), Postives = 107/171 (62.57%), Query Frame = 3
Query:  393 FLRGIDVNRLP------------SHADNEEEXXXXXXXXXXXXXXGKRSEREPNGDELEMERACSRGISDDED-GDTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKLS 866
            FLRGIDVNR P            S ++ +EE              GKR              A +   SDDED G  SRKKLRLSKDQ+A+LE++FKEHNTLNP           L+PRQVEVWFQNRRARTKLKQTEVDCE LKRCCE LT+ENRRL +E+QELRALKL+
Sbjct:   85 FLRGIDVNRAPAAETTTTTARGPSCSEEDEEPGASSPNSTLSSLSGKRGAPSA-------ATAAAAAASDDEDSGGGSRKKLRLSKDQAAVLEDTFKEHNTLNPKQKAALARQLNLKPRQVEVWFQNRRARTKLKQTEVDCELLKRCCETLTDENRRLHRELQELRALKLA 248          
BLAST of CK934342 vs. ExPASy Swiss-Prot
Match: HAT9_ARATH (Homeobox-leucine zipper protein HAT9 OS=Arabidopsis thaliana GN=HAT9 PE=2 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 2.188e-39
Identity = 83/133 (62.41%), Postives = 98/133 (73.68%), Query Frame = 3
Query:  498 RSEREPNGDELEMERACSRGISD---DEDGDTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKLSPQFYMQM 887
            + ER+   +  E E    R ISD   DE+G ++RKKLRL+K QSA+LEESFK+H+TLNP           LRPRQVEVWFQNRRARTKLKQTEVDCEFLK+CCE L +EN RLQKE+QEL+ LKL+  FYM M
Sbjct:   79 KRERDGGEESPEEEEMTERVISDYHEDEEGISARKKLRLTKQQSALLEESFKDHSTLNPKQKQVLARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLADENIRLQKEIQELKTLKLTQPFYMHM 211          
BLAST of CK934342 vs. ExPASy Swiss-Prot
Match: HAT22_ARATH (Homeobox-leucine zipper protein HAT22 OS=Arabidopsis thaliana GN=HAT22 PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.188e-39
Identity = 86/139 (61.87%), Postives = 102/139 (73.38%), Query Frame = 3
Query:  498 RSEREPNGDELEMER-------ACSRGISD--DEDGDTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKLSPQFYMQM 887
            + ERE +G + E E         CSR   D  DE+G ++RKKLRL+K QSA+LE++FK H+TLNP           LRPRQVEVWFQNRRARTKLKQTEVDCEFLK+CCE LT+ENRRLQKE+Q+L+ALKLS  FYM M
Sbjct:   86 KREREISGGDGEEEAEETTERVVCSRVSDDHDDEEGVSARKKLRLTKQQSALLEDNFKLHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLQKELQDLKALKLSQPFYMHM 224          
BLAST of CK934342 vs. ExPASy Swiss-Prot
Match: HOX19_ORYSJ (Homeobox-leucine zipper protein HOX19 OS=Oryza sativa subsp. japonica GN=HOX19 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 3.159e-38
Identity = 81/123 (65.85%), Postives = 94/123 (76.42%), Query Frame = 3
Query:  507 REPNGDELEMERACSR--GISDDEDGDTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKLSP 869
            +    +E + ER  S   G  DD+DG T RKKLRL+K+QSA+LE+ F+EH+TLNP           LRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCE LTEENRRLQ+E+QELRALK +P
Sbjct:   98 KRERAEEADGERVSSTAAGRDDDDDGST-RKKLRLTKEQSALLEDRFREHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTEENRRLQRELQELRALKFAP 219          
BLAST of CK934342 vs. ExPASy Swiss-Prot
Match: HOX19_ORYSI (Homeobox-leucine zipper protein HOX19 OS=Oryza sativa subsp. indica GN=HOX19 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 3.159e-38
Identity = 81/123 (65.85%), Postives = 94/123 (76.42%), Query Frame = 3
Query:  507 REPNGDELEMERACSR--GISDDEDGDTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKLSP 869
            +    +E + ER  S   G  DD+DG T RKKLRL+K+QSA+LE+ F+EH+TLNP           LRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCE LTEENRRLQ+E+QELRALK +P
Sbjct:   98 KRERAEEADGERVSSTAAGRDDDDDGST-RKKLRLTKEQSALLEDRFREHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTEENRRLQRELQELRALKFAP 219          
BLAST of CK934342 vs. ExPASy Swiss-Prot
Match: HOX15_ORYSJ (Homeobox-leucine zipper protein HOX15 OS=Oryza sativa subsp. japonica GN=HOX15 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 1.016e-36
Identity = 82/127 (64.57%), Postives = 93/127 (73.23%), Query Frame = 3
Query:  525 ELEMERAC---SRGISDDEDGDTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKLSPQ--FYMQMT 890
            E E ERA    S   +DD++G  SRKKLRLSK+QSA+LE+ FKEH+TLNP           LRPRQVEVWFQNRRARTKLKQTEVDCE LKRCCE LTEENRRL +E+Q+LRAL  S    F+M  T
Sbjct:   69 EYEYERALYSSSAAAADDDEGCNSRKKLRLSKEQSALLEDRFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCELLKRCCETLTEENRRLHRELQQLRALTHSTAAGFFMATT 195          
BLAST of CK934342 vs. ExPASy Swiss-Prot
Match: HOX15_ORYSI (Homeobox-leucine zipper protein HOX15 OS=Oryza sativa subsp. indica GN=HOX15 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 1.016e-36
Identity = 82/127 (64.57%), Postives = 93/127 (73.23%), Query Frame = 3
Query:  525 ELEMERAC---SRGISDDEDGDTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKLSPQ--FYMQMT 890
            E E ERA    S   +DD++G  SRKKLRLSK+QSA+LE+ FKEH+TLNP           LRPRQVEVWFQNRRARTKLKQTEVDCE LKRCCE LTEENRRL +E+Q+LRAL  S    F+M  T
Sbjct:   69 EYEYERALYSSSAAAADDDEGCNSRKKLRLSKEQSALLEDRFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCELLKRCCETLTEENRRLHRELQQLRALTHSTAAGFFMATT 195          
The following BLAST results are available for this feature:
BLAST of CK934342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
HOX27_ORYSJ5.208e-4151.78Homeobox-leucine zipper protein HOX27 OS=Oryza sat... [more]
HOX27_ORYSI6.801e-4151.78Homeobox-leucine zipper protein HOX27 OS=Oryza sat... [more]
HOX1_ORYSJ4.409e-4054.97Homeobox-leucine zipper protein HOX1 OS=Oryza sati... [more]
HOX1_ORYSI4.409e-4054.97Homeobox-leucine zipper protein HOX1 OS=Oryza sati... [more]
HAT9_ARATH2.188e-3962.41Homeobox-leucine zipper protein HAT9 OS=Arabidopsi... [more]
HAT22_ARATH2.188e-3961.87Homeobox-leucine zipper protein HAT22 OS=Arabidops... [more]
HOX19_ORYSJ3.159e-3865.85Homeobox-leucine zipper protein HOX19 OS=Oryza sat... [more]
HOX19_ORYSI3.159e-3865.85Homeobox-leucine zipper protein HOX19 OS=Oryza sat... [more]
HOX15_ORYSJ1.016e-3664.57Homeobox-leucine zipper protein HOX15 OS=Oryza sat... [more]
HOX15_ORYSI1.016e-3664.57Homeobox-leucine zipper protein HOX15 OS=Oryza sat... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004260_C09 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IIIF_C09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934342 ID=CK934342; Name=CK934342; organism=Citrus sinensis; type=EST; length=890bp
GGGGATTGATTAGCTATCGACTCTTCCTCTTCCTCTCTCTCTCTCTCTCT
CTCTCTCTCCGGAGGCACAGAATTTCTCTTGTTACTCGAATAAAGAGCCG
TTTGAGCAAGAACAAGAACACTTCAAATACTATACAAATACGTCAAATAA
TTTAAAGCTAGAGCTGTTTGAGCAAGAACAAGAAAACAGCCATGGCTGAG
AAAGATGATCTGGGTTTGAGTCTTAGCTTGAGCTTTCCTCAAAATCACCA
TTCTTTACAGCTAAATCTCATGCCTTCTTCTGCTTGTTCCACTTCTCCTT
CTGGTTTCAGTCTCCAAAAAACCCCTTGGAACGAGGCCTTATTCCCACCT
TCAGATCCAAACTCTGAGTCTTGTCGCGCCGAGACCCGATCATTTCTTAG
AGGAATCGACGTGAATCGATTGCCGTCACATGCAGATAACGAAGAAGAAG
TGGGCGTCTCATCTCCTAACAGCACGATTTCGAGCGTTAGCGGCAAGAGA
AGCGAGCGGGAACCTAATGGAGATGAGCTCGAAATGGAGAGAGCTTGCTC
CCGTGGTATCAGCGACGATGAAGATGGTGACACTTCAAGAAAGAAGCTGA
GACTTTCTAAAGATCAGTCAGCCATTCTTGAAGAGAGCTTCAAAGAGCAC
AACACTCTCAACCCAAAGCAAAAGTTGGCGTTGGCAAAGCAGCTTGGTCT
CAGACCTAGACAGGTGGAAGTGTGGTTCCAGAACAGAAGGGCAAGGACCA
AATTGAAGCAAACTGAGGTTGACTGCGAATTCTTGAAGAGATGCTGTGAG
AATCTGACGGAGGAGAACAGGCGGTTGCAGAAAGAAGTTCAGGAGCTGAG
AGCACTGAAGCTTTCCCCGCAGTTCTACATGCAAATGACC
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