CK934342
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934342 vs. ExPASy Swiss-Prot
Match: HOX27_ORYSJ (Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp. japonica GN=HOX27 PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 5.208e-41 Identity = 102/197 (51.78%), Postives = 119/197 (60.41%), Query Frame = 3 Query: 363 SESCRAETRSFLRGIDVNRLPSHA-------DNEEEXXXXXXXXXXXXXXGKRSEREPNGDELE---------------MERACSRGISDDEDGDTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKLSPQFYMQM 887 SE+ R+E + RG DVNR PS A D+EE G + +G L ER+ SR SDD++G ++RKKLRLSK+QSA LEESFKEH+TLNP LRPRQVEVWFQNRRARTKLKQTEVDCE+LKRCCE LTEENRRL KE+ ELRALK + FYM + Sbjct: 79 SETGRSEAAA--RGFDVNRAPSVAAGAPGMEDDEEGPGAAPALSSSPNDSGGSFPLDLSGQGLRGHAEAAAQGGGGGGGGERSSSRA-SDDDEGASARKKLRLSKEQSAFLEESFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLHKELAELRALKTARPFYMHL 272
BLAST of CK934342 vs. ExPASy Swiss-Prot
Match: HOX27_ORYSI (Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp. indica GN=HOX27 PE=2 SV=2) HSP 1 Score: 167.933 bits (424), Expect = 6.801e-41 Identity = 102/197 (51.78%), Postives = 119/197 (60.41%), Query Frame = 3 Query: 363 SESCRAETRSFLRGIDVNRLPSHA-------DNEEEXXXXXXXXXXXXXXGKRSEREPNGDELE---------------MERACSRGISDDEDGDTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKLSPQFYMQM 887 SE+ R+E + RG DVNR PS A D+EE G + +G L ER+ SR SDD++G ++RKKLRLSK+QSA LEESFKEH+TLNP LRPRQVEVWFQNRRARTKLKQTEVDCE+LKRCCE LTEENRRL KE+ ELRALK + FYM + Sbjct: 79 SETGRSEAAA--RGFDVNRAPSVAAGAPGMEDDEEGPGAAPALSSSPNDSGGSFPLDLSGHGLRGHAEAAAQGGGGGGGGERSSSRA-SDDDEGASARKKLRLSKEQSAFLEESFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLHKELAELRALKTARPFYMHL 272
BLAST of CK934342 vs. ExPASy Swiss-Prot
Match: HOX1_ORYSJ (Homeobox-leucine zipper protein HOX1 OS=Oryza sativa subsp. japonica GN=HOX1 PE=1 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 4.409e-40 Identity = 94/171 (54.97%), Postives = 107/171 (62.57%), Query Frame = 3 Query: 393 FLRGIDVNRLP------------SHADNEEEXXXXXXXXXXXXXXGKRSEREPNGDELEMERACSRGISDDED-GDTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKLS 866 FLRGIDVNR P S ++ +EE GKR A + SDDED G SRKKLRLSKDQ+A+LE++FKEHNTLNP L+PRQVEVWFQNRRARTKLKQTEVDCE LKRCCE LT+ENRRL +E+QELRALKL+ Sbjct: 85 FLRGIDVNRAPAAETTTTTARGPSCSEEDEEPGASSPNSTLSSLSGKRGAPSA-------ATAAAAAASDDEDSGGGSRKKLRLSKDQAAVLEDTFKEHNTLNPKQKAALARQLNLKPRQVEVWFQNRRARTKLKQTEVDCELLKRCCETLTDENRRLHRELQELRALKLA 248
BLAST of CK934342 vs. ExPASy Swiss-Prot
Match: HOX1_ORYSI (Homeobox-leucine zipper protein HOX1 OS=Oryza sativa subsp. indica GN=HOX1 PE=1 SV=2) HSP 1 Score: 165.236 bits (417), Expect = 4.409e-40 Identity = 94/171 (54.97%), Postives = 107/171 (62.57%), Query Frame = 3 Query: 393 FLRGIDVNRLP------------SHADNEEEXXXXXXXXXXXXXXGKRSEREPNGDELEMERACSRGISDDED-GDTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKLS 866 FLRGIDVNR P S ++ +EE GKR A + SDDED G SRKKLRLSKDQ+A+LE++FKEHNTLNP L+PRQVEVWFQNRRARTKLKQTEVDCE LKRCCE LT+ENRRL +E+QELRALKL+ Sbjct: 85 FLRGIDVNRAPAAETTTTTARGPSCSEEDEEPGASSPNSTLSSLSGKRGAPSA-------ATAAAAAASDDEDSGGGSRKKLRLSKDQAAVLEDTFKEHNTLNPKQKAALARQLNLKPRQVEVWFQNRRARTKLKQTEVDCELLKRCCETLTDENRRLHRELQELRALKLA 248
BLAST of CK934342 vs. ExPASy Swiss-Prot
Match: HAT9_ARATH (Homeobox-leucine zipper protein HAT9 OS=Arabidopsis thaliana GN=HAT9 PE=2 SV=2) HSP 1 Score: 162.925 bits (411), Expect = 2.188e-39 Identity = 83/133 (62.41%), Postives = 98/133 (73.68%), Query Frame = 3 Query: 498 RSEREPNGDELEMERACSRGISD---DEDGDTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKLSPQFYMQM 887 + ER+ + E E R ISD DE+G ++RKKLRL+K QSA+LEESFK+H+TLNP LRPRQVEVWFQNRRARTKLKQTEVDCEFLK+CCE L +EN RLQKE+QEL+ LKL+ FYM M Sbjct: 79 KRERDGGEESPEEEEMTERVISDYHEDEEGISARKKLRLTKQQSALLEESFKDHSTLNPKQKQVLARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLADENIRLQKEIQELKTLKLTQPFYMHM 211
BLAST of CK934342 vs. ExPASy Swiss-Prot
Match: HAT22_ARATH (Homeobox-leucine zipper protein HAT22 OS=Arabidopsis thaliana GN=HAT22 PE=1 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 2.188e-39 Identity = 86/139 (61.87%), Postives = 102/139 (73.38%), Query Frame = 3 Query: 498 RSEREPNGDELEMER-------ACSRGISD--DEDGDTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKLSPQFYMQM 887 + ERE +G + E E CSR D DE+G ++RKKLRL+K QSA+LE++FK H+TLNP LRPRQVEVWFQNRRARTKLKQTEVDCEFLK+CCE LT+ENRRLQKE+Q+L+ALKLS FYM M Sbjct: 86 KREREISGGDGEEEAEETTERVVCSRVSDDHDDEEGVSARKKLRLTKQQSALLEDNFKLHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLQKELQDLKALKLSQPFYMHM 224
BLAST of CK934342 vs. ExPASy Swiss-Prot
Match: HOX19_ORYSJ (Homeobox-leucine zipper protein HOX19 OS=Oryza sativa subsp. japonica GN=HOX19 PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 3.159e-38 Identity = 81/123 (65.85%), Postives = 94/123 (76.42%), Query Frame = 3 Query: 507 REPNGDELEMERACSR--GISDDEDGDTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKLSP 869 + +E + ER S G DD+DG T RKKLRL+K+QSA+LE+ F+EH+TLNP LRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCE LTEENRRLQ+E+QELRALK +P Sbjct: 98 KRERAEEADGERVSSTAAGRDDDDDGST-RKKLRLTKEQSALLEDRFREHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTEENRRLQRELQELRALKFAP 219
BLAST of CK934342 vs. ExPASy Swiss-Prot
Match: HOX19_ORYSI (Homeobox-leucine zipper protein HOX19 OS=Oryza sativa subsp. indica GN=HOX19 PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 3.159e-38 Identity = 81/123 (65.85%), Postives = 94/123 (76.42%), Query Frame = 3 Query: 507 REPNGDELEMERACSR--GISDDEDGDTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKLSP 869 + +E + ER S G DD+DG T RKKLRL+K+QSA+LE+ F+EH+TLNP LRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCE LTEENRRLQ+E+QELRALK +P Sbjct: 98 KRERAEEADGERVSSTAAGRDDDDDGST-RKKLRLTKEQSALLEDRFREHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTEENRRLQRELQELRALKFAP 219
BLAST of CK934342 vs. ExPASy Swiss-Prot
Match: HOX15_ORYSJ (Homeobox-leucine zipper protein HOX15 OS=Oryza sativa subsp. japonica GN=HOX15 PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 1.016e-36 Identity = 82/127 (64.57%), Postives = 93/127 (73.23%), Query Frame = 3 Query: 525 ELEMERAC---SRGISDDEDGDTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKLSPQ--FYMQMT 890 E E ERA S +DD++G SRKKLRLSK+QSA+LE+ FKEH+TLNP LRPRQVEVWFQNRRARTKLKQTEVDCE LKRCCE LTEENRRL +E+Q+LRAL S F+M T Sbjct: 69 EYEYERALYSSSAAAADDDEGCNSRKKLRLSKEQSALLEDRFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCELLKRCCETLTEENRRLHRELQQLRALTHSTAAGFFMATT 195
BLAST of CK934342 vs. ExPASy Swiss-Prot
Match: HOX15_ORYSI (Homeobox-leucine zipper protein HOX15 OS=Oryza sativa subsp. indica GN=HOX15 PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 1.016e-36 Identity = 82/127 (64.57%), Postives = 93/127 (73.23%), Query Frame = 3 Query: 525 ELEMERAC---SRGISDDEDGDTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKLSPQ--FYMQMT 890 E E ERA S +DD++G SRKKLRLSK+QSA+LE+ FKEH+TLNP LRPRQVEVWFQNRRARTKLKQTEVDCE LKRCCE LTEENRRL +E+Q+LRAL S F+M T Sbjct: 69 EYEYERALYSSSAAAADDDEGCNSRKKLRLSKEQSALLEDRFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCELLKRCCETLTEENRRLHRELQQLRALTHSTAAGFFMATT 195 The following BLAST results are available for this feature:
BLAST of CK934342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934342 ID=CK934342; Name=CK934342; organism=Citrus sinensis; type=EST; length=890bpback to top |