CK934342
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934342 vs. ExPASy Swiss-Prot
Match: HOX2_ORYSJ (Homeobox-leucine zipper protein HOX2 OS=Oryza sativa subsp. japonica GN=HOX2 PE=1 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.468e-35 Identity = 77/117 (65.81%), Postives = 91/117 (77.78%), Query Frame = 3 Query: 525 ELEMERACSRGISDDE--DGDTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKLSP 869 E E+ER+ S G+ DD+ DG RKKLRLSKDQ+A+LEE FK H+TLNP GLRPRQVEVWFQNRRARTKLKQTEVDCE+LKR CE L +EN+RL+KE+ +LRALK +P Sbjct: 92 ERELERSGS-GVDDDDGADGAGGRKKLRLSKDQAAVLEECFKTHSTLNPKQKVALANRLGLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRWCERLADENKRLEKELADLRALKAAP 207
BLAST of CK934342 vs. ExPASy Swiss-Prot
Match: HOX2_ORYSI (Homeobox-leucine zipper protein HOX2 OS=Oryza sativa subsp. indica GN=HOX2 PE=1 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.468e-35 Identity = 77/117 (65.81%), Postives = 91/117 (77.78%), Query Frame = 3 Query: 525 ELEMERACSRGISDDE--DGDTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKLSP 869 E E+ER+ S G+ DD+ DG RKKLRLSKDQ+A+LEE FK H+TLNP GLRPRQVEVWFQNRRARTKLKQTEVDCE+LKR CE L +EN+RL+KE+ +LRALK +P Sbjct: 92 ERELERSGS-GVDDDDGADGAGGRKKLRLSKDQAAVLEECFKTHSTLNPKQKVALANRLGLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRWCERLADENKRLEKELADLRALKAAP 207
BLAST of CK934342 vs. ExPASy Swiss-Prot
Match: HOX7_ORYSI (Homeobox-leucine zipper protein HOX7 OS=Oryza sativa subsp. indica GN=HOX7 PE=1 SV=2) HSP 1 Score: 149.058 bits (375), Expect = 3.269e-35 Identity = 98/242 (40.50%), Postives = 123/242 (50.83%), Query Frame = 3 Query: 186 TAMAEKDDLGLSLSLSFPQNHHS--------LQLNLMPSSACSTSPSGFSLQKTPWNEALFPPSDPNSESCRAETRSFLRGIDVNRLPSHADNEEEXXXXXXXXXXXXXXGKRSEREPNGDELEMERACSRGISDDED--GDTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELR-ALKLSPQFY 878 T M +++DL L L + + M T P G + P FP ++E+ A + RG DVN P+ E G+ S + ++ + +DDED G +RKKLRLSK+QS+ LE+SFKEH+TL P LRPRQVEVWFQNRRARTKLKQTEVDCE LKRCCE LT ENRRLQ+EV ELR AL+ + Y Sbjct: 27 TCMGDEEDLELVLGVRATRRDEQDDQTTCTQSSEEAMEGEEDETRPHG----EAPVESLSFPLFVSSAETGSANSEMCTRGFDVNTRPADGGAEA---------------GRPSSPSSMQEASTRQQVADQEAADDEDNGGGGARKKLRLSKEQSSFLEDSFKEHSTLTPKQKSDLANRLNLRPRQVEVWFQNRRARTKLKQTEVDCEHLKRCCERLTRENRRLQREVAELRGALRTTTSSY 249
BLAST of CK934342 vs. ExPASy Swiss-Prot
Match: HOX7_ORYSJ (Homeobox-leucine zipper protein HOX7 OS=Oryza sativa subsp. japonica GN=HOX7 PE=1 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 5.577e-35 Identity = 95/232 (40.95%), Postives = 118/232 (50.86%), Query Frame = 3 Query: 186 TAMAEKDDLGLSLSLSFPQNHHS--------LQLNLMPSSACSTSPSGFSLQKTPWNEALFPPSDPNSESCRAETRSFLRGIDVNRLPSHADNEEEXXXXXXXXXXXXXXGKRSEREPNGDELEMERACSRGISDDED--GDTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELR 851 T M +++DL L L + + M T P G + P FP ++E+ A + RG DVN P+ E G+ S + ++ + +DDED G +RKKLRLSK+QS+ LE+SFKEH+TL P LRPRQVEVWFQNRRARTKLKQTEVDCE LKRCCE LT ENRRLQ+EV ELR Sbjct: 27 TCMGDEEDLELVLGVRATRRDEQDDQTTCTQSSEEAMEGEEDETRPHG----EAPVESLSFPLFVSSAETGSANSEMCTRGFDVNTRPADGGAEA---------------GRPSSPSSMQEASTRQQVADQEAADDEDNGGGGARKKLRLSKEQSSFLEDSFKEHSTLTPKQKSDLANRLNLRPRQVEVWFQNRRARTKLKQTEVDCEHLKRCCERLTRENRRLQREVAELR 239
BLAST of CK934342 vs. ExPASy Swiss-Prot
Match: HOX28_ORYSJ (Homeobox-leucine zipper protein HOX28 OS=Oryza sativa subsp. japonica GN=HOX28 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.163e-32 Identity = 74/126 (58.73%), Postives = 87/126 (69.05%), Query Frame = 3 Query: 492 GKRSEREPNGDELEMERACSRGISDDEDGDTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKLSP 869 GKR +GDE++ + C G G +RKKLRLSKDQ+A+LEE FK H+TL P LRPRQVEVWFQNRRARTKLKQTEVDCE LKR C+ L ++NRRL KE+ ELRALK +P Sbjct: 68 GKRGSGSGSGDEVD-DAGCDVG------GGGARKKLRLSKDQAAVLEECFKTHHTLTPKQKVALAKSLNLRPRQVEVWFQNRRARTKLKQTEVDCEHLKRWCDQLADDNRRLHKELAELRALKATP 186
BLAST of CK934342 vs. ExPASy Swiss-Prot
Match: HOX28_ORYSI (Homeobox-leucine zipper protein HOX28 OS=Oryza sativa subsp. indica GN=HOX28 PE=2 SV=2) HSP 1 Score: 140.584 bits (353), Expect = 1.163e-32 Identity = 74/126 (58.73%), Postives = 87/126 (69.05%), Query Frame = 3 Query: 492 GKRSEREPNGDELEMERACSRGISDDEDGDTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKLSP 869 GKR +GDE++ + C G G +RKKLRLSKDQ+A+LEE FK H+TL P LRPRQVEVWFQNRRARTKLKQTEVDCE LKR C+ L ++NRRL KE+ ELRALK +P Sbjct: 68 GKRGSGSGSGDEVD-DAGCDVG------GGGARKKLRLSKDQAAVLEECFKTHHTLTPKQKVALAKSLNLRPRQVEVWFQNRRARTKLKQTEVDCEHLKRWCDQLADDNRRLHKELAELRALKATP 186
BLAST of CK934342 vs. ExPASy Swiss-Prot
Match: HOX3_ORYSJ (Homeobox-leucine zipper protein HOX3 OS=Oryza sativa subsp. japonica GN=HOX3 PE=1 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.572e-29 Identity = 71/126 (56.35%), Postives = 87/126 (69.05%), Query Frame = 3 Query: 492 GKRSEREPNGDELEMERACSRGISDDEDGDTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKLSP 869 G E P G E E RG+ G KKLRLSK+QS +LEESF+ ++TL P LRPRQVEVWFQNRRARTKLKQTE++CE+LKRC +LTEENRRLQ+EV+ELRA++++P Sbjct: 51 GGEEEEFPMGSVEEDEE--ERGVG----GPHRPKKLRLSKEQSRLLEESFRLNHTLTPKQKEALAIKLKLRPRQVEVWFQNRRARTKLKQTEMECEYLKRCFGSLTEENRRLQREVEELRAMRVAP 170
BLAST of CK934342 vs. ExPASy Swiss-Prot
Match: HOX3_ORYSI (Homeobox-leucine zipper protein HOX3 OS=Oryza sativa subsp. indica GN=HOX3 PE=1 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.572e-29 Identity = 71/126 (56.35%), Postives = 87/126 (69.05%), Query Frame = 3 Query: 492 GKRSEREPNGDELEMERACSRGISDDEDGDTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKLSP 869 G E P G E E RG+ G KKLRLSK+QS +LEESF+ ++TL P LRPRQVEVWFQNRRARTKLKQTE++CE+LKRC +LTEENRRLQ+EV+ELRA++++P Sbjct: 51 GGEEEEFPMGSVEEDEE--ERGVG----GPHRPKKLRLSKEQSRLLEESFRLNHTLTPKQKEALAIKLKLRPRQVEVWFQNRRARTKLKQTEMECEYLKRCFGSLTEENRRLQREVEELRAMRVAP 170
BLAST of CK934342 vs. ExPASy Swiss-Prot
Match: ATB17_ARATH (Homeobox-leucine zipper protein ATHB-17 OS=Arabidopsis thaliana GN=ATHB-17 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.964e-28 Identity = 73/173 (42.20%), Postives = 98/173 (56.65%), Query Frame = 3 Query: 351 SDPNSESCRAETRSFLRGIDVNRLPSHADNEEEXXXXXXXXXXXXXXGKRSEREPNGDELEMERACSRGISDDEDGDTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKLSP 869 S P S+ R LR +D+NRLPS D ++E S D+ RKKLRL+++QS +LE+SF++++TLNP LRPRQ+EVWFQNRRAR+KLKQTE++CE+LKR +LTEEN RL +EV+ELRA+K+ P Sbjct: 95 SSPLSDEGSGGGRDQLR-LDMNRLPSSEDGDDEE-----------------------------------FSHDDGSAPPRKKLRLTREQSRLLEDSFRQNHTLNPKQKEVLAKHLMLRPRQIEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEENHRLHREVEELRAMKVGP 231
BLAST of CK934342 vs. ExPASy Swiss-Prot
Match: HOX18_ORYSI (Homeobox-leucine zipper protein HOX18 OS=Oryza sativa subsp. indica GN=HOX18 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 3.871e-28 Identity = 62/101 (61.39%), Postives = 76/101 (75.25%), Query Frame = 3 Query: 555 GISDDEDGDTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRAL 857 G S G +RKKL+L+K+QS +LE+SF+ HN L+ L+PRQVEVWFQNRRARTKLKQTEVDCEFLKRCCE+LTEEN++L+ E+ ELR L Sbjct: 103 GGSGSGGGGGTRKKLQLTKEQSTLLEDSFRVHNILSHAQKHELARQLKLKPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCESLTEENKQLKHELMELRRL 203 The following BLAST results are available for this feature:
BLAST of CK934342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934342 ID=CK934342; Name=CK934342; organism=Citrus sinensis; type=EST; length=890bpback to top |