CK934342
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934342 vs. ExPASy Swiss-Prot
Match: HOX21_ORYSI (Homeobox-leucine zipper protein HOX21 OS=Oryza sativa subsp. indica GN=HOX21 PE=2 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.478e-11 Identity = 39/96 (40.62%), Postives = 53/96 (55.21%), Query Frame = 3 Query: 567 DEDGDTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRA 854 D+ KK RL+ +Q LE++F+ N L P GL+PRQV +WFQNRRAR K KQ E D + LKR + + EN L ++L+A Sbjct: 116 DDGSQAGEKKRRLNVEQVRTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDALKRQLDAVKAENDALLNHNKKLQA 211
BLAST of CK934342 vs. ExPASy Swiss-Prot
Match: HAT5_ARATH (Homeobox-leucine zipper protein HAT5 OS=Arabidopsis thaliana GN=HAT5 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.930e-11 Identity = 42/102 (41.18%), Postives = 53/102 (51.96%), Query Frame = 3 Query: 564 DDEDGDTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTE-------ENRRLQKEVQEL 848 D D KK RL+ +Q +LE+SF+ N L P GL+PRQV VWFQNRRAR K KQ E D + LK + L +N +L+ EV L Sbjct: 59 DFYDDQLPEKKRRLTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLLKSTYDQLLSNYDSIVMDNDKLRSEVTSL 160
BLAST of CK934342 vs. ExPASy Swiss-Prot
Match: HOX4_ORYSJ (Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. japonica GN=HOX4 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.521e-11 Identity = 47/122 (38.52%), Postives = 60/122 (49.18%), Query Frame = 3 Query: 510 EPNGDELEMERACSRGISDDEDGDTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQK-------EVQELRA 854 E GD E AC G KK RLS +Q LE SF+ N L P GL+PRQV VWFQNRRAR K KQ E D L+ ++L ++ L++ E++EL+A Sbjct: 33 EAEGDVEEEMMACGGG---------GEKKRRLSVEQVRALERSFEVENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRHSYDSLRLDHDALRRDKDALLAEIKELKA 145
BLAST of CK934342 vs. ExPASy Swiss-Prot
Match: HOX4_ORYSI (Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. indica GN=HOX4 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.521e-11 Identity = 47/122 (38.52%), Postives = 60/122 (49.18%), Query Frame = 3 Query: 510 EPNGDELEMERACSRGISDDEDGDTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQK-------EVQELRA 854 E GD E AC G KK RLS +Q LE SF+ N L P GL+PRQV VWFQNRRAR K KQ E D L+ ++L ++ L++ E++EL+A Sbjct: 33 EAEGDVEEEMMACGGG---------GEKKRRLSVEQVRALERSFEVENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRHSYDSLRLDHDALRRDKDALLAEIKELKA 145
BLAST of CK934342 vs. ExPASy Swiss-Prot
Match: HOX20_ORYSJ (Homeobox-leucine zipper protein HOX20 OS=Oryza sativa subsp. japonica GN=HOX20 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.292e-11 Identity = 43/112 (38.39%), Postives = 56/112 (50.00%), Query Frame = 3 Query: 519 GDELEMERACSRGISDDEDGDTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRA 854 G E EM+ + G KK RLS +Q LE SF+ N L P GL+PRQV VWFQNRRAR K KQ E D L++ + L ++ L+++ L A Sbjct: 19 GVEEEMDVDEDMAMCGGRGGGGGEKKRRLSVEQVRALERSFETENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRQSYDALRADHDALRRDKDALLA 130
BLAST of CK934342 vs. ExPASy Swiss-Prot
Match: HOX20_ORYSI (Homeobox-leucine zipper protein HOX20 OS=Oryza sativa subsp. indica GN=HOX20 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.292e-11 Identity = 43/112 (38.39%), Postives = 56/112 (50.00%), Query Frame = 3 Query: 519 GDELEMERACSRGISDDEDGDTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRA 854 G E EM+ + G KK RLS +Q LE SF+ N L P GL+PRQV VWFQNRRAR K KQ E D L++ + L ++ L+++ L A Sbjct: 19 GVEEEMDVDEDMAMCGGRGGGGGEKKRRLSVEQVRALERSFETENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRQSYDALRADHDALRRDKDALLA 130
BLAST of CK934342 vs. ExPASy Swiss-Prot
Match: HOX23_ORYSJ (Homeobox-leucine zipper protein HOX23 OS=Oryza sativa subsp. japonica GN=HOX23 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.616e-11 Identity = 43/104 (41.35%), Postives = 52/104 (50.00%), Query Frame = 3 Query: 564 DDEDG-------DTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRA 854 D+EDG KK RLS +Q LE SF+ N L P GL+PRQV +WFQNRRAR K KQ E D + L+R + EN L +L A Sbjct: 88 DEEDGCGGGGGGGGGEKKRRLSVEQVRTLERSFESGNKLEPERKAQLARALGLQPRQVAIWFQNRRARWKTKQLEKDFDALRRQLDAARAENDALLSLNSKLHA 191
BLAST of CK934342 vs. ExPASy Swiss-Prot
Match: HOX23_ORYSI (Homeobox-leucine zipper protein HOX23 OS=Oryza sativa subsp. indica GN=HOX23 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.616e-11 Identity = 43/104 (41.35%), Postives = 52/104 (50.00%), Query Frame = 3 Query: 564 DDEDG-------DTSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRA 854 D+EDG KK RLS +Q LE SF+ N L P GL+PRQV +WFQNRRAR K KQ E D + L+R + EN L +L A Sbjct: 88 DEEDGCGGGGGGGGGEKKRRLSVEQVRTLERSFESGNKLEPERKAQLARALGLQPRQVAIWFQNRRARWKTKQLEKDFDALRRQLDAARAENDALLSLNSKLHA 191
BLAST of CK934342 vs. ExPASy Swiss-Prot
Match: ATB54_ARATH (Homeobox-leucine zipper protein ATHB-54 OS=Arabidopsis thaliana GN=ATHB-54 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.579e-11 Identity = 41/96 (42.71%), Postives = 51/96 (53.12%), Query Frame = 3 Query: 591 KKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTE-------ENRRLQKEVQELRAL 857 KK +L+ Q +LEESF+E L P GL+P QV VWFQNRRAR K KQ E DC+ LK L +N+ L+ +VQ L L Sbjct: 68 KKRKLTPIQLRLLEESFEEEKRLEPDRKLWLAEKLGLQPSQVAVWFQNRRARYKTKQLEHDCDSLKASYAKLKTDWDILFVQNQTLKSKVQFLNRL 163
BLAST of CK934342 vs. ExPASy Swiss-Prot
Match: ATB51_ARATH (Putative homeobox-leucine zipper protein ATHB-51 OS=Arabidopsis thaliana GN=ATHB-51 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.579e-11 Identity = 39/89 (43.82%), Postives = 53/89 (59.55%), Query Frame = 3 Query: 591 KKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRAL 857 KK RL+ Q A LE SF+E L+ GL+PRQ+ VWFQNRRAR K KQ E + L++ + ++ E + L EV++LRAL Sbjct: 78 KKKRLTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAVWFQNRRARWKAKQLEQLYDSLRQEYDVVSREKQMLHDEVKKLRAL 166 The following BLAST results are available for this feature:
BLAST of CK934342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934342 ID=CK934342; Name=CK934342; organism=Citrus sinensis; type=EST; length=890bpback to top |