CK934430
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_CLOBL (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=gatA PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.185e-19 Identity = 70/202 (34.65%), Postives = 110/202 (54.46%), Query Frame = 3 Query: 171 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 + + T +L+ ++ + ++ + +L I+ ++ L + V+ + A+ +A + D K++ L+ L GIP+ +KDNI K NT A S L P DA V K+++ IILGK ++ E++ SS S F KNP+ L P GSS GSA++VA + A +SLGT+T GS+ P+S VVGLKP G Sbjct: 3 LTKLTAHELKDMLSNKEVKAEEITKAFLDRINLVDNKLGAYLYVSEEEAIKKAKEIDV--KIEKNEELKALSGIPVGIKDNINVKGMQNTCA-SKILEGYTSPYDAHVTEKIKQEEGIILGKLNMDEFA-MGSSTENSAFK----LAKNPWDLERVPGGSSGGSAVAVAGSEATLSLGTDTGGSVRQPASFCGVVGLKPTYG 196
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_PSEPF (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pseudomonas fluorescens (strain Pf0-1) GN=gatA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.547e-19 Identity = 70/202 (34.65%), Postives = 102/202 (50.50%), Query Frame = 3 Query: 171 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 + + T+ ++ K +S +L + L I +L+P L+ I + + AL QA AD R A G L G PI KD T+ + T+ GS L P DA VV KL AG + LGK ++ E++ +++ S G KNP+ L P GSS GSA +VA L + T+T GSI P++ ++ GLKP G Sbjct: 1 MHQLTLAEIARGLADKKFSSEELTKVLLARITQLDPQLNSFISLTEELALEQAKAADVRR---ANGESGALLGAPIAHKDLFCTQG-IRTSCGSKMLDNFKAPYDATVVSKLAAAGTVTLGKTNMDEFAMGSANE-----SSWYGAVKNPWNLEHVPGGSSGGSAAAVAARLLPAATATDTGGSIRQPAAFTNLTGLKPTYG 193
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_NITMU (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=gatA PE=3 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 1.547e-19 Identity = 73/202 (36.14%), Postives = 105/202 (51.98%), Query Frame = 3 Query: 180 ATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNP-DALSQADKADYERKVKAAGSLRG--LHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALGL 776 A++K L K++S +L +L LNP + I ++ +L+QA AD GS RG L G+PI KD TK + TT GS L + P DA V+ + GA+ +GK ++ E++ SS S + G KNP+ +A P GSS GSA +VA +A + GT+T GSI P++ + GLKP GL Sbjct: 4 ASLKQLSAMLAARKISSVELTSEFLKRSRALNPEYNAFITLDERTSLAQAQAADI-----LIGSGRGQPLTGVPIAQKDIFCTKGWL-TTCGSKMLSNFISPYDAHVIGRFNAVGAVNIGKTNMDEFA-MGSSNETSFY----GPVKNPWDTAAVPGGSSGGSACAVAARMAPAATGTDTGGSIRQPAALCGISGLKPTYGL 194
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_METAC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanosarcina acetivorans GN=gatA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.547e-19 Identity = 72/192 (37.50%), Postives = 102/192 (53.12%), Query Frame = 3 Query: 198 QLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 Q+ K + ++ ++ YL I + ++G I V+ AL QA K D E G L G+PI +KDNI+ N+ GS L V P +A V+ KL AGA+ILGK +L E++ S++ + G NP+ L P GSS GSA VA A +LG++T GS+ CP++ VVGLKP G Sbjct: 10 QVKDKIKESSAEEVTAGYLEVIEKSK--INGYITVSDKALEQAKKIDVE------GHEGPLAGVPIAIKDNISVVGLPNS-CGSKILEGYVPPFNAHVIEKLLDAGAVILGKTNLDEFAMGSSTE-----TSYYGPTANPWDLERVPGGSSGGSAAVVAAGEAPFALGSDTGGSVRCPAAFCGVVGLKPTYG 187
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_COREF (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Corynebacterium efficiens GN=gatA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.547e-19 Identity = 70/200 (35.00%), Postives = 108/200 (54.00%), Query Frame = 3 Query: 183 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDA-LSQADKADYERKVKAAGSL--RGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 T +L ++TSR++ + +L I+ ++ +H + V +A L+ AD D K AG L G+P+ LKD + T D TTA S L + P DA V KLR+AG ILGK ++ E++ SS S + G +NP+ L P GS GS+ ++A+ A +++GT+T GSI P++ + VG+KP G Sbjct: 18 TAAELAGLIHSREVTSREVTQAHLDRINEVDGEIHAFLHVGEEAALAAADAVD---KALDAGEAPASALAGVPLALKDALVTTDAP-TTAASKILEGYMSPYDATVTRKLREAGIPILGKTNMDEFA-MGSSTENSAY----GATRNPWDLERTPGGSGGGSSAALASGEAPLAIGTDTGGSIRQPAALTNTVGVKPTYG 208
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_CLOBJ (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium botulinum (strain Kyoto / Type A2) GN=gatA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.547e-19 Identity = 70/202 (34.65%), Postives = 108/202 (53.47%), Query Frame = 3 Query: 171 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 + + T +L+ ++ + ++ +L I+ ++ L + V+ + A+ +A + D K++ L+ L GIP+ +KDNI K NT A S L P DA V K++K IILGK ++ E++ SS S F KNP+ L P GSS GSA++VA A +SLGT+T GS+ P+S +VGLKP G Sbjct: 3 LTKLTAHELKDILSNKEVKAEEITRAFLDRINLVDNKLGAYLYVSEEEAIKKAKEIDV--KIEKNEELKALSGIPVGIKDNINVKGMQNTCA-SKILQGYTSPYDAHVTEKIKKEEGIILGKLNMDEFA-MGSSTENSAFK----LAKNPWDLERVPGGSSGGSAVAVAGCEATLSLGTDTGGSVRQPASFCGIVGLKPTYG 196
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_CLOBH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=gatA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.547e-19 Identity = 70/202 (34.65%), Postives = 110/202 (54.46%), Query Frame = 3 Query: 171 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 + + T +L+ ++ + ++ + +L I+ ++ L + V+ + A+ +A + D K++ L+ L GIP+ +KDNI K NT A S L P DA V K+++ IILGK ++ E++ SS S F KNP+ L P GSS GSA++VA + A +SLGT+T GS+ P+S VVGLKP G Sbjct: 3 LTKLTAHELKDMLSNKEVKAEEITKAFLDRINLVDNKLGAYLYVSEEEAIKKAKEID--GKIEKNEELKALSGIPVGIKDNINVKGMQNTCA-SKILEGYTSPYDAHVTEKIKQEEGIILGKLNMDEFA-MGSSTENSAFK----LAKNPWDLERVPGGSSGGSAVAVAGSEATLSLGTDTGGSVRQPASFCGVVGLKPTYG 196
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_CLOB1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=gatA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.547e-19 Identity = 70/202 (34.65%), Postives = 110/202 (54.46%), Query Frame = 3 Query: 171 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 + + T +L+ ++ + ++ + +L I+ ++ L + V+ + A+ +A + D K++ L+ L GIP+ +KDNI K NT A S L P DA V K+++ IILGK ++ E++ SS S F KNP+ L P GSS GSA++VA + A +SLGT+T GS+ P+S VVGLKP G Sbjct: 3 LTKLTAHELKDMLSNKEVKAEEITKAFLDRINLVDNKLGAYLYVSEEEAIKKAKEID--GKIEKNEELKALSGIPVGIKDNINVKGMQNTCA-SKILEGYTSPYDAHVTEKIKQEEGIILGKLNMDEFA-MGSSTENSAFK----LAKNPWDLERVPGGSSGGSAVAVAGSEATLSLGTDTGGSVRQPASFCGVVGLKPTYG 196
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_CHLSY (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=gatA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.547e-19 Identity = 71/201 (35.32%), Postives = 103/201 (51.24%), Query Frame = 3 Query: 171 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 + T+ Q A +T+ +L E L I+ P + + + PDA A +A ER+ + SL L GIPI +KD I T D + TTAGS L P +A V+ +L AGA+++GK + E++ SS S + NP+ + P GSS GSA +VA +LGT+T GSI P++ + GLKP G Sbjct: 4 LHHLTVTAAQAALAAGDITAVELTEACLARINATEPTIRAFLHLTPDAALAAARAADERRQQGR-SLGPLDGIPIAIKDVICT-DGVPTTAGSRILAGFRPPYNATVIERLVAAGAVLVGKLNCDEFA-MGSSTENSAYQIT----TNPWDPTRVPGGSSGGSAAAVAAGQVPATLGTDTGGSIRQPAALCGISGLKPTYG 197
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_CHLAA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=gatA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.547e-19 Identity = 71/201 (35.32%), Postives = 103/201 (51.24%), Query Frame = 3 Query: 171 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 + T+ Q A +T+ +L E L I+ P + + + PDA A +A ER+ + SL L GIPI +KD I T D + TTAGS L P +A V+ +L AGA+++GK + E++ SS S + NP+ + P GSS GSA +VA +LGT+T GSI P++ + GLKP G Sbjct: 4 LHHLTVTAAQAALAAGDITAVELTEACLARINATEPTIRAFLHLTPDAALAAARAADERRQQGR-SLGPLDGIPIAIKDVICT-DGVPTTAGSRILAGFRPPYNATVIERLVAAGAVLVGKLNCDEFA-MGSSTENSAYQIT----TNPWDPTRVPGGSSGGSAAAVAAGQVPATLGTDTGGSIRQPAALCGISGLKPTYG 197 The following BLAST results are available for this feature:
BLAST of CK934430 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934430 ID=CK934430; Name=CK934430; organism=Citrus sinensis; type=EST; length=780bpback to top |