CK934430
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA2_CLOAB (Glutamyl-tRNA(Gln) amidotransferase subunit A 2 OS=Clostridium acetobutylicum GN=gatA2 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.352e-23 Identity = 79/203 (38.92%), Postives = 110/203 (54.19%), Query Frame = 3 Query: 171 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALGL 776 I + T++ L+ A L S +V+ Y I R P ++ I + D AL +A D ++K+ + L GIPI +KDNI T D + TT S L V P DA V+ KL+ AII+GK ++ E++ SS S F KNP ++ P GSS GSA VA +A +SLG++T GSI P++ VVGLKP GL Sbjct: 3 ILDMTVEQLRNAILDKHLKSEDIVKAYFDNIKRNEPEINAYITLCEDYALKEAK--DVDKKIANGDKVGRLAGIPIAIKDNICT-DGIKTTCASKMLYDFVPPYDATVIKKLKAEDAIIIGKVNMDEFA-MGSSTENSAFKIT----KNPRDITRVPGGSSGGSAAVVAAKMAPISLGSDTGGSIRQPAAFCGVVGLKPTYGL 197
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_ACAM1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Acaryochloris marina (strain MBIC 11017) GN=gatA PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.766e-23 Identity = 79/201 (39.30%), Postives = 115/201 (57.21%), Query Frame = 3 Query: 180 ATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGL-HGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALGL 776 A+I+ L + +++++ E L IH+L P LH + + D AL+QA + D + AAG GL GIPI +KDN+ TK + TT GS L + P ++ V KL AGA+++GK +L E++ SS S + G NP+ +S P GSS GSA +VA + VS+G++T GSI P++ VVGLKP GL Sbjct: 2 ASIQALHQELITKERSAQEITEAALETIHQLEPKLHSFLAITADQALAQAKQVDAQL---AAGEEIGLLAGIPIGIKDNMCTKG-IATTCGSKILQNFIPPYESTVTQKLAAAGAVMVGKTNLDEFA-MGSSTENSAYQVTG----NPWDVSRVPGGSSGGSAAAVAADECVVSIGSDTGGSIRQPAALCGVVGLKPTYGL 193
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_GEOSM (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Geobacter sp. (strain M21) GN=gatA PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.012e-23 Identity = 79/202 (39.11%), Postives = 110/202 (54.46%), Query Frame = 3 Query: 171 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 I + TI +L K +++S + L I ++ ++ I V P+ AL QA AD R++ AAG + L G+P+ LKD TK + TT GS L V P D V KL++ GA+I+GK + E++ SS S F G +NP+ LS P GSS GSA ++A A +LGT+T GSI P+S VGLKP G Sbjct: 3 IFDLTIHELHEKLKAKEVSSVEATRAMLDRIEAVDSQVNAYITVTPEQALVQAQDAD--RRI-AAGEIAPLTGVPVGLKDIFVTKG-IRTTCGSRILENFVPPYDGTAVAKLKEQGAVIVGKLNQDEFA-MGSSNESSYF----GPCRNPWDLSCTPGGSSGGSAAAIAARTATATLGTDTGGSIRQPASHCGCVGLKPTYG 195
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_HAHCH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Hahella chejuensis (strain KCTC 2396) GN=gatA PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.934e-23 Identity = 76/198 (38.38%), Postives = 108/198 (54.55%), Query Frame = 3 Query: 183 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 TI ++ + + +SR++ + YL I RLNP L+ I V D ALSQA++AD AG L+G+P+ KD T+ + TT GS L + V P ++ V K AGA+ LGK ++ E++ SS S F G +NP+ P GSS GSA +VA L A + GT+T GSI P++ + GLKP G Sbjct: 5 TISEIISGLRDKQFSSREITQDYLARIKRLNPELNCFITVTEDLALSQAEQADARLN---AGQTSVLNGVPLAHKDVFCTEG-VTTTCGSRMLEKFVPPYESTVTRKFIDAGAVTLGKTNMDEFA-MGSSNENSYF----GPVRNPWDTERAPGGSSGGSAAAVAAGLCAAATGTDTGGSIRQPAAFCGLTGLKPTYG 193
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_GRABC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=gatA PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.934e-23 Identity = 76/207 (36.71%), Postives = 115/207 (55.56%), Query Frame = 3 Query: 171 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSAD-----PCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 + + TI + + + + ++R+L + +LG I LNP L+ I V PD A +QA AD +V A+G L GIP+ KD ++ + TTAGS L V P ++ V ++ + GA+ILGKA+L E++ S+ S + G +NP+ D P GSS GSA +VA +LA + GT+T GSI P+S + G+KP G Sbjct: 4 LTDLTIAEARDGLRAKRFSARELTDAHLGAIEALNPRLNAYITVTPDQARAQAAAAD---RVLASGEAGALTGIPVASKDMFCSEG-IRTTAGSRILENFVPPYESAVTERMLRDGAVILGKANLDEFA-MGSANLTSAY----GPVENPWKRHDDDAVLVPGGSSGGSAAAVAAHLALGATGTDTGGSIRQPASYCGIAGIKPTYG 201
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_AZOSE (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Azoarcus sp. (strain EbN1) GN=gatA PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.934e-23 Identity = 75/199 (37.69%), Postives = 108/199 (54.27%), Query Frame = 3 Query: 180 ATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALGL 776 A++ +L+ A K++S +L +L I RL+ L+ I V+ D +A +A R AAG L GIP+ KD T+ + TT GS L V P DA VV L+ AGA+ LGK ++ E++ SS S F G KNP+ + P GSS GSA +VA L ++ GT+T GS+ P++ V G+KP G+ Sbjct: 4 ASLTELRAALDARKISSVELATLFLDRIERLDASLNAFITVDRDGALEAARAADARI--AAGDAGPLTGIPLAHKDVFCTEGVL-TTCGSKMLANFVSPYDAHVVSLLKTAGAVSLGKTNMDEFA-MGSSNENSHF----GPAKNPWDTTRIPGGSSGGSAAAVAARLVPIATGTDTGGSVRQPAALTGVTGIKPTYGV 194
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_THETN (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thermoanaerobacter tengcongensis GN=gatA PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.138e-23 Identity = 73/199 (36.68%), Postives = 115/199 (57.79%), Query Frame = 3 Query: 183 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALGL 776 T+ +L+ + +++++++ + YL I + P + ++ + + AL +A AD K G + L GIP+++KDNI+T+ + TT S L + P +A VV +L G +ILGK++L E++ SS S F KNP+ LS P GSS GSA +VA + AA +LG++T GSI P+S VVG+KP GL Sbjct: 7 TVHELKELLHKREVSAQEVTKSYLERIKEVEPKIDALVTITEEFALERAKVADEMIK---NGEAKDLTGIPVIIKDNISTEG-IRTTCSSKMLENYIPPYNATVVERLLNEGVVILGKSNLDEFA-MGSSTENSAFKTT----KNPWDLSRVPGGSSGGSAAAVAADEAAFALGSDTGGSIRQPASLCGVVGMKPTYGL 196
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_PROMM (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Prochlorococcus marinus (strain MIT 9313) GN=gatA PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.711e-23 Identity = 71/196 (36.22%), Postives = 109/196 (55.61%), Query Frame = 3 Query: 186 IKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 I + + K ++++R+L + L I ++P LH +++ D ++AD + + A SL L G+P+ +KDN+ TK + TT S L V P ++ V +L +AGA++LGK +L E++ SS S F G NP+ +S P GSS GSA +VA +LG++T GSI P+S VVGLKP G Sbjct: 3 IAEWRQQLKLGEVSARELTDHQLARIAVVDPTLHAFLDITADR-ARADADRIDEALAAGESLPPLAGVPLAIKDNLCTKG-IRTTCSSRMLETFVPPYESTVTERLWQAGAVLLGKTNLDEFA-MGSSTETSAF----GATSNPWDISRVPGGSSGGSAAAVAAGECMAALGSDTGGSIRQPASFCGVVGLKPTYG 191
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_PROM3 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Prochlorococcus marinus (strain MIT 9303) GN=gatA PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.711e-23 Identity = 71/196 (36.22%), Postives = 110/196 (56.12%), Query Frame = 3 Query: 186 IKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 I + + K ++++R+L++ L I ++P LH ++V + ++AD + + A SL L G+P+ +KDN+ TK + TT S L V P ++ V +L +AGA++LGK +L E++ SS S F G NP+ +S P GSS GSA +VA +LG++T GSI P+S VVGLKP G Sbjct: 3 IAEWRQQLKLGEVSARELIDHQLARIAVVDPTLHAFLDVTAER-ARADADRIDEALAAGESLPPLAGVPLAIKDNLCTKG-IRTTCSSRMLETFVPPYESTVTERLWQAGAVLLGKTNLDEFA-MGSSTETSAF----GATSNPWDISRVPGGSSGGSAAAVAAGECMAALGSDTGGSIRQPASFCGVVGLKPTYG 191
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA1_CLOAB (Glutamyl-tRNA(Gln) amidotransferase subunit A 1 OS=Clostridium acetobutylicum GN=gatA1 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.711e-23 Identity = 71/204 (34.80%), Postives = 117/204 (57.35%), Query Frame = 3 Query: 165 FPIREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEV-NPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 + ++ +KD+ + ++ ++ +L I ++ ++ ++ V +A++ A + D +K+++ SL GL G+P+ +KDNI+ K+ NT A S L V P DA V+ L+K +I+GKA++ E++ SS S F KNP+ L P GSS GSA++VA+ A +SLGTET GS+ P+S +VGLKP G Sbjct: 4 YKLKAHELKDM---ISKKEVKVEEVTNSFLNRIEEVDEKVNALLYVAKEEAVNTAKELD--KKIESGESLSGLSGVPVAIKDNISVKNMQNTCA-SKILEGYVSPYDATVIENLKKNNGVIIGKANMDEFA-MGSSTENSAFK----VSKNPWSLERVPGGSSGGSAVAVASLEAPISLGTETGGSVRQPASFCGLVGLKPTYG 196 The following BLAST results are available for this feature:
BLAST of CK934430 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934430 ID=CK934430; Name=CK934430; organism=Citrus sinensis; type=EST; length=780bpback to top |