CK934430
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_BORGA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Borrelia garinii GN=gatA PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.312e-15 Identity = 66/200 (33.00%), Postives = 100/200 (50.00%), Query Frame = 3 Query: 174 REATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 ++ I D+ LA+K N + LN ++G IE D+L A + D K L L G+PI +KDNI+ +DK + T S L + P DA V+ +L+ GAI++GK ++ E++ +G G NP GSS GSA VA+ A SLG++T GS+ P+S + ++G KP+ G Sbjct: 18 KKCKIYDILLAYKNN---------------YELNKDINGYIEFFDDSLDIAKRYDDCLKNCELEDLP-LIGMPIAVKDNISIQDK-SLTCASEILKGYISPYDATVIKRLKNKGAILIGKTNMDEFA-----MGSTGEFSCYGATLNPLNREYVIGGSSGGSAAVVASFQAPFSLGSDTGGSVRLPASFSGILGFKPSYG 195
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_SINMW (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Sinorhizobium medicae (strain WSM419) GN=gatA PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.019e-15 Identity = 66/202 (32.67%), Postives = 98/202 (48.51%), Query Frame = 3 Query: 183 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYV-----LSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 TI + + ++T+ +L + YL I N ++ I V PD + KA R AG L GIP+ +KD T+ ++T A S+ L ++ V L GA++LGK ++ E++ SS S + G KNP+ L P GSS GSA +VA L A + T+T GSI P++ VG+KP G Sbjct: 8 TIAEARAKLSDKEITAVELTDAYLAAIEAANETINAYIAVTPDKAREMAKASDARI--GAGKAGALEGIPLGIKDLFGTQG-LHTQACSHILDGFRPHYESTVTQNLWNDGAVMLGKLNMDEFA-MGSSNETSYY----GPVKNPWRAKESNLDLVPGGSSGGSAAAVAARLCAGATATDTGGSIRQPAAFTGTVGIKPTYG 201
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_MYCPA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Mycobacterium paratuberculosis GN=gatA PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.019e-15 Identity = 67/188 (35.64%), Postives = 97/188 (51.60%), Query Frame = 3 Query: 219 KLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSL--RGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 +L+S ++ + L +I + H + V D AL A D + AAG L G+P+ LKD T D M TT GS L P DA V KLR AG ILGK ++ E++ SS S + G +NP+ + P GS GSA ++A A +++G++T GSI P++ + VG+KP G Sbjct: 20 ELSSVEVTQACLDQIAATDERYHAFLHVAADEALGAAAVVD---EAVAAGERLPSPLAGVPLALKDVFTTVD-MPTTCGSKILQGWRSPYDATVTTKLRAAGIPILGKTNMDEFA-MGSSTENSAY----GPTRNPWNVERVPGGSGGGSAAALAAFQAPLAIGSDTGGSIRQPAALTATVGVKPTYG 198
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_MESSB (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Mesorhizobium sp. (strain BNC1) GN=gatA PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.019e-15 Identity = 68/206 (33.01%), Postives = 103/206 (50.00%), Query Frame = 3 Query: 171 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPR-DAGVVVKLRKAGAIILGKASLSEW----SNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 + + TI +++ + T+ +L E YL I N L+ I V D + KA R ++ G R L G+P+ +KD AT+ ++T A S+ +L + PR ++ V L GA++LGK ++ E+ SN S P R G V P GSS GSA +VA L A + T+T GSI P++ + VG+KP G Sbjct: 4 LTKLTISEIRAKLADKEFTALELTEAYLSAIQTANEKLNAYITVTADKAREMAKASDMRLMQ--GGARPLEGVPLGIKDLFATEG-VHTQACSH-ILDAFKPRYESTVTTNLWADGAVMLGKLNMDEFAMGSSNETSYYGPVVNPWREEGGNKDLV----PGGSSGGSAAAVAAWLCAGATATDTGGSIRQPAAFTATVGIKPTYG 201
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_LACS1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=gatA PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.019e-15 Identity = 68/186 (36.56%), Postives = 100/186 (53.76%), Query Frame = 3 Query: 219 KLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 K + +L + I +++ + ++++ + AL +A K D ER VKA L GI I +KDNI TKD + TTA S L +A V+ KL AG I +GK ++ E++ SS S F KN + + P GSS GSA +VA+ SLG++T GSI P++ N +VG+KP G Sbjct: 19 KYSVEELTKSTFDNIKKVDKEIEAFLKLDEERALEKARKID-ERGVKADSIL---DGIGIGIKDNIVTKD-LTTTAASKMLENFEPIYNATVMDKLNDAGMITVGKLNMDEFA-MGSSTENSAFKIT----KNVWDTTKVPGGSSGGSAAAVASGQVLASLGSDTGGSIRQPAAFNGIVGVKPTYG 194
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_HALMA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Haloarcula marismortui GN=gatA PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.019e-15 Identity = 56/133 (42.11%), Postives = 77/133 (57.89%), Query Frame = 3 Query: 378 LHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALGL 776 L G + +KDNI+T+ + TT GS L V P DA VV +L+ AGA I GK ++ E+ +++ S F G +NP P GSS GSA VA A ++LG++T GSI CP++ VVG+KP GL Sbjct: 21 LAGKTVAVKDNISTEG-VRTTCGSAMLEDYVPPYDATVVERLKDAGATIPGKTNMDEFGMGTTTET-SAF----GAVENPAAEGRVPGGSSGGSAAVVAAGDADLALGSDTGGSIRCPAAFCGVVGIKPTYGL 147
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_CLOBA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=gatA PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.019e-15 Identity = 61/197 (30.96%), Postives = 104/197 (52.79%), Query Frame = 3 Query: 186 IKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEV-NPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 +KDL + +++ ++ + +L + ++ ++ + + +AL+ A D K+ + L G P+ +KDNI+ K+ NT A S L + P DA V ++ G +ILGK ++ E++ SS S + +NP+ L P GSS GSA +VA+ ++LGT+T GS+ P+S +VGLKP G Sbjct: 11 LKDL---ISKKEVSVEEVTKAHLENVKNIDAKVNAFLYIAEEEALNDAKALD--EKLSKGEDIGLLGGAPLGIKDNISVKNMQNTCA-SKILEGYISPYDATVSESVKSQGGVILGKLNMDEFA-MGSSTENSAYKIT----RNPWDLDRVPGGSSGGSAAAVASKEVPLALGTDTGGSVRQPASFCGIVGLKPTYG 196
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_BRUAB (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Brucella abortus GN=gatA PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.019e-15 Identity = 67/202 (33.17%), Postives = 97/202 (48.02%), Query Frame = 3 Query: 183 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSAD-----PCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 TI + + K +T+ +L + YL I N ++ + V D KA ER K G L GIP+ +KD ATK ++T A S+ L ++ V L GA++LGK ++ E + SS S + G KNP+ P GSS GSA +VA +L A + T+T GSI P++ VG+KP G Sbjct: 8 TIAEARDKLKAKAITATELTDAYLSAIDAANDAINAYVAVTHDQARSMAKASDERIAK--GEAGALEGIPLGVKDLFATKG-VHTQACSHILDGFKPEYESTVTANLWADGAVMLGKLNMDEVA-MGSSNETSYY----GPVKNPWRAKGSNADLVPGGSSGGSAAAVAAHLCAGATATDTGGSIRQPAAFTGTVGIKPTYG 201
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_BRUA2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Brucella abortus (strain 2308) GN=gatA PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.019e-15 Identity = 67/202 (33.17%), Postives = 97/202 (48.02%), Query Frame = 3 Query: 183 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSAD-----PCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 TI + + K +T+ +L + YL I N ++ + V D KA ER K G L GIP+ +KD ATK ++T A S+ L ++ V L GA++LGK ++ E + SS S + G KNP+ P GSS GSA +VA +L A + T+T GSI P++ VG+KP G Sbjct: 8 TIAEARDKLKAKAITATELTDAYLSAIDAANDAINAYVAVTHDQARSMAKASDERIAK--GEAGALEGIPLGVKDLFATKG-VHTQACSHILDGFKPEYESTVTANLWADGAVMLGKLNMDEVA-MGSSNETSYY----GPVKNPWRAKGSNADLVPGGSSGGSAAAVAAHLCAGATATDTGGSIRQPAAFTGTVGIKPTYG 201
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_BRUA1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Brucella abortus (strain S19) GN=gatA PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.019e-15 Identity = 67/202 (33.17%), Postives = 97/202 (48.02%), Query Frame = 3 Query: 183 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSAD-----PCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 TI + + K +T+ +L + YL I N ++ + V D KA ER K G L GIP+ +KD ATK ++T A S+ L ++ V L GA++LGK ++ E + SS S + G KNP+ P GSS GSA +VA +L A + T+T GSI P++ VG+KP G Sbjct: 8 TIAEARDKLKAKAITATELTDAYLSAIDAANDAINAYVAVTHDQARSMAKASDERIAK--GEAGALEGIPLGVKDLFATKG-VHTQACSHILDGFKPEYESTVTANLWADGAVMLGKLNMDEVA-MGSSNETSYY----GPVKNPWRAKGSNADLVPGGSSGGSAAAVAAHLCAGATATDTGGSIRQPAAFTGTVGIKPTYG 201 The following BLAST results are available for this feature:
BLAST of CK934430 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934430 ID=CK934430; Name=CK934430; organism=Citrus sinensis; type=EST; length=780bpback to top |