CK934430

Overview
NameCK934430
Unique NameCK934430
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length780
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_STRA5 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus agalactiae serotype V GN=gatA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.150e-15
Identity = 63/188 (33.51%), Postives = 102/188 (54.26%), Query Frame = 3
Query:  213 QNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773
            + ++++ +L +  L +IH     +   I ++ + A++QA + D     K   +   + GIP+ +KDNI+TK  + TTA S  L       DA  V KL     I++GKA++ E++   S++  S F     +  N +  S  P GSS GSA +VA+    +SLG++T GSI  P+S N +VG+KP  G
Sbjct:   17 KKEISATELTKATLEDIHAREQAVGSFITISDEMAIAQAKEIDD----KGIDADNVMSGIPLAVKDNISTKGIL-TTAASKMLYNYEPIFDATAVEKLYAKDMIVIGKANMDEFAMGGSTET-SYFK----KTNNAWDHSKVPGGSSGGSAAAVASGQVRLSLGSDTGGSIRQPASFNGIVGMKPTYG 194          
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_STRA1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus agalactiae serotype Ia GN=gatA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.150e-15
Identity = 63/188 (33.51%), Postives = 102/188 (54.26%), Query Frame = 3
Query:  213 QNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773
            + ++++ +L +  L +IH     +   I ++ + A++QA + D     K   +   + GIP+ +KDNI+TK  + TTA S  L       DA  V KL     I++GKA++ E++   S++  S F     +  N +  S  P GSS GSA +VA+    +SLG++T GSI  P+S N +VG+KP  G
Sbjct:   17 KKEISATELTKATLEDIHAREQAVGSFITISDEMAIAQAKEIDD----KGIDADNVMSGIPLAVKDNISTKGIL-TTAASKMLYNYEPIFDATAVEKLYAKDMIVIGKANMDEFAMGGSTET-SYFK----KTNNAWDHSKVPGGSSGGSAAAVASGQVRLSLGSDTGGSIRQPASFNGIVGMKPTYG 194          
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_SALRD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Salinibacter ruber (strain DSM 13855) GN=gatA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.150e-15
Identity = 66/198 (33.33%), Postives = 98/198 (49.49%), Query Frame = 3
Query:  183 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773
            T  D + A    + +   LV  +L  I   +  ++    V+ D AL+ A   D +R+    G+ R L G+ + +KDNI  +     + GS  L       DA V+ +LR AGAI +GK +  E++   SS   S F    G  +NP+     P GSS GSA +VA  L   +LG++T GS+  P++    VGLKP  G
Sbjct:    5 TFTDARRALDAGETSCEALVSSFLERIDARDNEINAFTSVDQDGALNHARYLDSQRE---RGNPRPLAGLVLAVKDNICIRG-YPVSCGSKMLADFSSLYDATVIDRLRDAGAIFIGKTNCDEFA-MGSSNETSHF----GPVRNPHAPEYVPGGSSGGSAAAVAAGLCHAALGSDTGGSVRQPAAFCGTVGLKPTYG 193          
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_MYCA1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Mycobacterium avium (strain 104) GN=gatA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.150e-15
Identity = 67/188 (35.64%), Postives = 96/188 (51.06%), Query Frame = 3
Query:  219 KLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSL--RGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773
            +L+S +  +  L +I   +   H  + V  D AL  A   D   +  AAG      L G+P+ LKD   T D M TT GS  L     P DA V  KLR AG  ILGK ++ E++   SS   S +    G  +NP+ +   P GS  GSA ++A   A +++G++T GSI  P++  + VG+KP  G
Sbjct:   20 ELSSVEATQACLDQIAATDERYHAFLHVAADEALGAAAVVD---EAVAAGERLPSPLAGVPLALKDVFTTVD-MPTTCGSKILQGWRSPYDATVTTKLRAAGIPILGKTNMDEFA-MGSSTENSAY----GPTRNPWNVERVPGGSGGGSAAALAAFQAPLAIGSDTGGSIRQPAALTATVGVKPTYG 198          
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_CLOBB (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=gatA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.150e-15
Identity = 59/195 (30.26%), Postives = 102/195 (52.31%), Query Frame = 3
Query:  192 DLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEV-NPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773
            +L+    + + +  ++ + +L  +  ++  ++  + +   +AL+ A   D   K+     +  L G P+ +KDNI+ K+  NT A S  L   + P DA V   ++  G +ILGK ++ E++   SS   S +       +NP+ L   P GSS GSA +VA+    ++LGT+T GS+  P+S   +VGLKP  G
Sbjct:   10 ELKNLISKKEASVEEVTKAHLENVKNIDEKVNAFLYIAEEEALNDAKALD--EKLSKGEDIGLLGGAPLGIKDNISVKNMQNTCA-SKILEGYISPYDATVSESVKSQGGVILGKLNMDEFA-MGSSTENSAYKIT----RNPWDLDRVPGGSSGGSAAAVASKEVPLALGTDTGGSVRQPASFCGIVGLKPTYG 196          
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_CHLPD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chlorobium phaeobacteroides (strain DSM 266) GN=gatA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.150e-15
Identity = 65/198 (32.83%), Postives = 100/198 (50.51%), Query Frame = 3
Query:  180 ATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773
            ++ +DL+ +    + T  ++ + YL  I R       +   +  ALS+A   D  R+    G+   L G+P+ +KDNI+ K    T A S  L       DA V+ +L    A+ +GK ++ E++   SS   S F    G   NP+  +  P GSS GSA +VA  LA V+LG++T GS+  P+    +VGLKP  G
Sbjct:    4 SSYQDLRSSLLAGQTTCEEVTKSYLERIDRHCDDNIFLAVFHEQALSRARSLD--RRFSEGGTPGLLFGMPMAIKDNISIKGARLTCA-SRILENYESVYDATVIERLLNEDAVFIGKTNMDEFA-MGSSNENSAF----GPVANPFDKTRVPGGSSGGSAAAVAAGLALVALGSDTGGSVRQPAGFCDIVGLKPTYG 193          
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_CHLL2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=gatA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.150e-15
Identity = 64/198 (32.32%), Postives = 97/198 (48.99%), Query Frame = 3
Query:  180 ATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773
            ++ +DL+      ++T  ++V  YL  I R       +   +  A+ +A K D  +K+   G    L G+P+ +KDNI+ K     T  S  L       DA  V +L    A+ LGK ++ E++   SS   S F    G   NP+  +  P GSS GSA +VA  LA  +LG++T GS+  P+    +VGLKP  G
Sbjct:    4 SSYQDLRSELISRRITCEKVVLDYLERIDRHRDDNIYITVFHEQAVEKARKLD--KKLSEGGLPGKLFGMPMAIKDNISIKGA-GLTCASRILENYESVYDATAVQRLEAEDAVFLGKTNMDEFA-MGSSNENSAF----GAVPNPFDKTRVPGGSSGGSAAAVAAGLALAALGSDTGGSVRQPAGFCDIVGLKPTYG 193          
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_CHLAB (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chlamydophila abortus GN=gatA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.150e-15
Identity = 58/159 (36.48%), Postives = 84/159 (52.83%), Query Frame = 3
Query:  315 LSQADKADYER------KVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773
            LS  ++  YE+      KV     L  L G+PI +KDNI  +  + TT  S  L   + P DA VV ++     +ILGK ++ E++   S+   S F       KNP+ LS  P GSS GSA +V+     ++LG++T GSI  P++   VVG KP+ G
Sbjct:   42 LSLCEERAYEKAAIIDAKVARGEPLGKLAGVPIGIKDNIHIRG-LRTTCASKMLENYIAPFDATVVERIEAEDGVILGKLNMDEFA-MGSTTQYSAFHPT----KNPWGLSCVPGGSSGGSAAAVSARFCPIALGSDTGGSIRQPAAFCGVVGFKPSYG 194          
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_BRAHW (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) GN=gatA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.150e-15
Identity = 65/205 (31.71%), Postives = 106/205 (51.71%), Query Frame = 3
Query:  171 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPL---LHGVIEV-NPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773
            + E TI  ++   K  ++ +  LV+  +  I   N     ++  +E+   +AL QA KA  + ++     L  L G+P+ +KDN+  KD +  TA S  L     P  A  V +L   GAII+G+ ++ E++   +++     +   G  +NP   +  P GSS GSA +VA N A  +LG++T GSI  P+S   +VG+KP  G
Sbjct:    3 LNELTIIQIREKLKNKEIDAPTLVDSIIKNIEEDNKRDDKIYAYLEIFKEEALEQAKKA--QERINNGEDLP-LLGVPLAIKDNLCYKDHL-MTASSKMLEGYKAPYTAPTVQRLIDNGAIIIGRTNMDEFAMGGTTE-----TSNYGVTRNPKNRAHVPGGSSGGSAAAVAANFAFGALGSDTGGSIRQPASFCGIVGVKPTYG 198          
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_BACST (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bacillus stearothermophilus GN=gatA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.150e-15
Identity = 61/197 (30.96%), Postives = 99/197 (50.25%), Query Frame = 3
Query:  183 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773
            ++ +L    ++ +++   LV+     I  +   +   + +N +  ++A   + + ++        L G+PI +KDNI TK  + TT     L       DA V+ +L  AGAI +GK ++ E++   SS   SGF       +NP+ L   P GSS GSA +VA      +LG++T GSI  P++   VVGLKP  G
Sbjct:    7 SVSELHTLLQKKEVSISDLVDESYRRIGEVEEKVQAFLTLNEEQ-ARAKAKELDDQLAKGEETNPLFGLPIGIKDNIVTKG-LRTTCAIKILYNFDPIYDATVMERLNAAGAITIGKLNMDEFA-MGSSTENSGFQ----LTRNPWDLKRVPGGSSGGSAAAVAAGEVPFALGSDTGGSIRQPAAFCGVVGLKPTYG 196          
The following BLAST results are available for this feature:
BLAST of CK934430 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GATA_STRA55.150e-1533.51Glutamyl-tRNA(Gln) amidotransferase subunit A OS=S... [more]
GATA_STRA15.150e-1533.51Glutamyl-tRNA(Gln) amidotransferase subunit A OS=S... [more]
GATA_SALRD5.150e-1533.33Glutamyl-tRNA(Gln) amidotransferase subunit A OS=S... [more]
GATA_MYCA15.150e-1535.64Glutamyl-tRNA(Gln) amidotransferase subunit A OS=M... [more]
GATA_CLOBB5.150e-1530.26Glutamyl-tRNA(Gln) amidotransferase subunit A OS=C... [more]
GATA_CHLPD5.150e-1532.83Glutamyl-tRNA(Gln) amidotransferase subunit A OS=C... [more]
GATA_CHLL25.150e-1532.32Glutamyl-tRNA(Gln) amidotransferase subunit A OS=C... [more]
GATA_CHLAB5.150e-1536.48Glutamyl-tRNA(Gln) amidotransferase subunit A OS=C... [more]
GATA_BRAHW5.150e-1531.71Glutamyl-tRNA(Gln) amidotransferase subunit A OS=B... [more]
GATA_BACST5.150e-1530.96Glutamyl-tRNA(Gln) amidotransferase subunit A OS=B... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004259_C09 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IIF_C09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934430 ID=CK934430; Name=CK934430; organism=Citrus sinensis; type=EST; length=780bp
GCGGGGATCCATCTCATCCAACTCCGAGCCNNNCAAAGTGACCATCGATG
CATTGCCTAAAAATGGCTACCAGTAGTATCGCAATACTGGCCTTTTCTTT
GTTTTCCCATCTGCTCCTTCCGACTCTTCTAGCCATATCAGCTCAAAGTA
ATGCCATTCATGCATTCCCAATAAGAGAAGCAACCATCAAGGATCTCCAG
CTCGCTTTCAAGCAAAACAAGCTCACGTCCCGGCAGCTGGTTGAATTTTA
CCTCGGAGAAATCCACAGGCTCAACCCGCTGCTTCACGGCGTCATAGAGG
TGAACCCCGATGCACTATCCCAAGCTGATAAGGCTGACTACGAGCGCAAG
GTTAAGGCAGCAGGCTCACTGCGGGGCTTGCACGGGATTCCTATTCTTCT
TAAGGATAACATTGCAACGAAGGACAAGATGAACACCACTGCTGGCTCGT
ATGCTCTGCTCCGCTCAGTCGTGCCCCGGGATGCTGGTGTGGTGGTGAAG
TTGAGGAAAGCTGGTGCCATTATTTTGGGAAAGGCCAGCTTGAGTGAGTG
GTCTAACTTTAGATCCTCCAAAGCACCCAGTGGTTTCAGTGGTAGGGGGG
GCCAGGGAAAGAATCCATATGTTCTATCAGCAGATCCTTGTGGGTCAAGC
AGTGGCTCAGCAATTTCAGTAGCTACAAACTTGGCTGCCGTGTCACTGGG
AACTGAAACGGATGGTTCCATTCTATGTCCGTCCAGTTCTAACTCAGTAG
TGGGACTCAAACCAGCCCTTGGTCTCACCA
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