CK934430
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_STRA5 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus agalactiae serotype V GN=gatA PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.150e-15 Identity = 63/188 (33.51%), Postives = 102/188 (54.26%), Query Frame = 3 Query: 213 QNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 + ++++ +L + L +IH + I ++ + A++QA + D K + + GIP+ +KDNI+TK + TTA S L DA V KL I++GKA++ E++ S++ S F + N + S P GSS GSA +VA+ +SLG++T GSI P+S N +VG+KP G Sbjct: 17 KKEISATELTKATLEDIHAREQAVGSFITISDEMAIAQAKEIDD----KGIDADNVMSGIPLAVKDNISTKGIL-TTAASKMLYNYEPIFDATAVEKLYAKDMIVIGKANMDEFAMGGSTET-SYFK----KTNNAWDHSKVPGGSSGGSAAAVASGQVRLSLGSDTGGSIRQPASFNGIVGMKPTYG 194
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_STRA1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus agalactiae serotype Ia GN=gatA PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.150e-15 Identity = 63/188 (33.51%), Postives = 102/188 (54.26%), Query Frame = 3 Query: 213 QNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 + ++++ +L + L +IH + I ++ + A++QA + D K + + GIP+ +KDNI+TK + TTA S L DA V KL I++GKA++ E++ S++ S F + N + S P GSS GSA +VA+ +SLG++T GSI P+S N +VG+KP G Sbjct: 17 KKEISATELTKATLEDIHAREQAVGSFITISDEMAIAQAKEIDD----KGIDADNVMSGIPLAVKDNISTKGIL-TTAASKMLYNYEPIFDATAVEKLYAKDMIVIGKANMDEFAMGGSTET-SYFK----KTNNAWDHSKVPGGSSGGSAAAVASGQVRLSLGSDTGGSIRQPASFNGIVGMKPTYG 194
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_SALRD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Salinibacter ruber (strain DSM 13855) GN=gatA PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.150e-15 Identity = 66/198 (33.33%), Postives = 98/198 (49.49%), Query Frame = 3 Query: 183 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 T D + A + + LV +L I + ++ V+ D AL+ A D +R+ G+ R L G+ + +KDNI + + GS L DA V+ +LR AGAI +GK + E++ SS S F G +NP+ P GSS GSA +VA L +LG++T GS+ P++ VGLKP G Sbjct: 5 TFTDARRALDAGETSCEALVSSFLERIDARDNEINAFTSVDQDGALNHARYLDSQRE---RGNPRPLAGLVLAVKDNICIRG-YPVSCGSKMLADFSSLYDATVIDRLRDAGAIFIGKTNCDEFA-MGSSNETSHF----GPVRNPHAPEYVPGGSSGGSAAAVAAGLCHAALGSDTGGSVRQPAAFCGTVGLKPTYG 193
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_MYCA1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Mycobacterium avium (strain 104) GN=gatA PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.150e-15 Identity = 67/188 (35.64%), Postives = 96/188 (51.06%), Query Frame = 3 Query: 219 KLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSL--RGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 +L+S + + L +I + H + V D AL A D + AAG L G+P+ LKD T D M TT GS L P DA V KLR AG ILGK ++ E++ SS S + G +NP+ + P GS GSA ++A A +++G++T GSI P++ + VG+KP G Sbjct: 20 ELSSVEATQACLDQIAATDERYHAFLHVAADEALGAAAVVD---EAVAAGERLPSPLAGVPLALKDVFTTVD-MPTTCGSKILQGWRSPYDATVTTKLRAAGIPILGKTNMDEFA-MGSSTENSAY----GPTRNPWNVERVPGGSGGGSAAALAAFQAPLAIGSDTGGSIRQPAALTATVGVKPTYG 198
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_CLOBB (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=gatA PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.150e-15 Identity = 59/195 (30.26%), Postives = 102/195 (52.31%), Query Frame = 3 Query: 192 DLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEV-NPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 +L+ + + + ++ + +L + ++ ++ + + +AL+ A D K+ + L G P+ +KDNI+ K+ NT A S L + P DA V ++ G +ILGK ++ E++ SS S + +NP+ L P GSS GSA +VA+ ++LGT+T GS+ P+S +VGLKP G Sbjct: 10 ELKNLISKKEASVEEVTKAHLENVKNIDEKVNAFLYIAEEEALNDAKALD--EKLSKGEDIGLLGGAPLGIKDNISVKNMQNTCA-SKILEGYISPYDATVSESVKSQGGVILGKLNMDEFA-MGSSTENSAYKIT----RNPWDLDRVPGGSSGGSAAAVASKEVPLALGTDTGGSVRQPASFCGIVGLKPTYG 196
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_CHLPD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chlorobium phaeobacteroides (strain DSM 266) GN=gatA PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.150e-15 Identity = 65/198 (32.83%), Postives = 100/198 (50.51%), Query Frame = 3 Query: 180 ATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 ++ +DL+ + + T ++ + YL I R + + ALS+A D R+ G+ L G+P+ +KDNI+ K T A S L DA V+ +L A+ +GK ++ E++ SS S F G NP+ + P GSS GSA +VA LA V+LG++T GS+ P+ +VGLKP G Sbjct: 4 SSYQDLRSSLLAGQTTCEEVTKSYLERIDRHCDDNIFLAVFHEQALSRARSLD--RRFSEGGTPGLLFGMPMAIKDNISIKGARLTCA-SRILENYESVYDATVIERLLNEDAVFIGKTNMDEFA-MGSSNENSAF----GPVANPFDKTRVPGGSSGGSAAAVAAGLALVALGSDTGGSVRQPAGFCDIVGLKPTYG 193
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_CHLL2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=gatA PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.150e-15 Identity = 64/198 (32.32%), Postives = 97/198 (48.99%), Query Frame = 3 Query: 180 ATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 ++ +DL+ ++T ++V YL I R + + A+ +A K D +K+ G L G+P+ +KDNI+ K T S L DA V +L A+ LGK ++ E++ SS S F G NP+ + P GSS GSA +VA LA +LG++T GS+ P+ +VGLKP G Sbjct: 4 SSYQDLRSELISRRITCEKVVLDYLERIDRHRDDNIYITVFHEQAVEKARKLD--KKLSEGGLPGKLFGMPMAIKDNISIKGA-GLTCASRILENYESVYDATAVQRLEAEDAVFLGKTNMDEFA-MGSSNENSAF----GAVPNPFDKTRVPGGSSGGSAAAVAAGLALAALGSDTGGSVRQPAGFCDIVGLKPTYG 193
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_CHLAB (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chlamydophila abortus GN=gatA PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.150e-15 Identity = 58/159 (36.48%), Postives = 84/159 (52.83%), Query Frame = 3 Query: 315 LSQADKADYER------KVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 LS ++ YE+ KV L L G+PI +KDNI + + TT S L + P DA VV ++ +ILGK ++ E++ S+ S F KNP+ LS P GSS GSA +V+ ++LG++T GSI P++ VVG KP+ G Sbjct: 42 LSLCEERAYEKAAIIDAKVARGEPLGKLAGVPIGIKDNIHIRG-LRTTCASKMLENYIAPFDATVVERIEAEDGVILGKLNMDEFA-MGSTTQYSAFHPT----KNPWGLSCVPGGSSGGSAAAVSARFCPIALGSDTGGSIRQPAAFCGVVGFKPSYG 194
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_BRAHW (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) GN=gatA PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.150e-15 Identity = 65/205 (31.71%), Postives = 106/205 (51.71%), Query Frame = 3 Query: 171 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPL---LHGVIEV-NPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 + E TI ++ K ++ + LV+ + I N ++ +E+ +AL QA KA + ++ L L G+P+ +KDN+ KD + TA S L P A V +L GAII+G+ ++ E++ +++ + G +NP + P GSS GSA +VA N A +LG++T GSI P+S +VG+KP G Sbjct: 3 LNELTIIQIREKLKNKEIDAPTLVDSIIKNIEEDNKRDDKIYAYLEIFKEEALEQAKKA--QERINNGEDLP-LLGVPLAIKDNLCYKDHL-MTASSKMLEGYKAPYTAPTVQRLIDNGAIIIGRTNMDEFAMGGTTE-----TSNYGVTRNPKNRAHVPGGSSGGSAAAVAANFAFGALGSDTGGSIRQPASFCGIVGVKPTYG 198
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_BACST (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bacillus stearothermophilus GN=gatA PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.150e-15 Identity = 61/197 (30.96%), Postives = 99/197 (50.25%), Query Frame = 3 Query: 183 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 ++ +L ++ +++ LV+ I + + + +N + ++A + + ++ L G+PI +KDNI TK + TT L DA V+ +L AGAI +GK ++ E++ SS SGF +NP+ L P GSS GSA +VA +LG++T GSI P++ VVGLKP G Sbjct: 7 SVSELHTLLQKKEVSISDLVDESYRRIGEVEEKVQAFLTLNEEQ-ARAKAKELDDQLAKGEETNPLFGLPIGIKDNIVTKG-LRTTCAIKILYNFDPIYDATVMERLNAAGAITIGKLNMDEFA-MGSSTENSGFQ----LTRNPWDLKRVPGGSSGGSAAAVAAGEVPFALGSDTGGSIRQPAAFCGVVGLKPTYG 196 The following BLAST results are available for this feature:
BLAST of CK934430 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934430 ID=CK934430; Name=CK934430; organism=Citrus sinensis; type=EST; length=780bpback to top |