CK934430

Overview
NameCK934430
Unique NameCK934430
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length780
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_BACAN (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bacillus anthracis GN=gatA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.150e-15
Identity = 64/166 (38.55%), Postives = 83/166 (50.00%), Query Frame = 3
Query:  294 IEVNPDALSQADKADYERKVKAAGSLRG------LHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773
            +E N  A    D+ +   K K   +  G      L G+PI +KDNI T   + TT  S  L       DA VV KL+ A  I +GK ++ E++   SS   SGF       KNP+ L   P GSS GSA +VA      SLG++T GSI  P++   VVGLKP  G
Sbjct:   36 VEDNVKAFLTLDEENARAKAKELDAKIGAEDNGLLFGMPIGVKDNIVTNG-LRTTCASKILANFDPIYDATVVQKLKAADTITIGKLNMDEFA-MGSSNENSGFYAT----KNPWNLDYVPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQPAAYCGVVGLKPTYG 195          
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_BACAH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bacillus thuringiensis (strain Al Hakam) GN=gatA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.150e-15
Identity = 64/166 (38.55%), Postives = 83/166 (50.00%), Query Frame = 3
Query:  294 IEVNPDALSQADKADYERKVKAAGSLRG------LHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773
            +E N  A    D+ +   K K   +  G      L G+PI +KDNI T   + TT  S  L       DA VV KL+ A  I +GK ++ E++   SS   SGF       KNP+ L   P GSS GSA +VA      SLG++T GSI  P++   VVGLKP  G
Sbjct:   36 VEDNVKAFLTLDEENARAKAKELDAKIGAEDNGLLFGMPIGVKDNIVTNG-LRTTCASKILANFDPIYDATVVQKLKAADTITIGKLNMDEFA-MGSSNENSGFYAT----KNPWNLDYVPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQPAAYCGVVGLKPTYG 195          
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_BACAC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=gatA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.150e-15
Identity = 64/166 (38.55%), Postives = 83/166 (50.00%), Query Frame = 3
Query:  294 IEVNPDALSQADKADYERKVKAAGSLRG------LHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773
            +E N  A    D+ +   K K   +  G      L G+PI +KDNI T   + TT  S  L       DA VV KL+ A  I +GK ++ E++   SS   SGF       KNP+ L   P GSS GSA +VA      SLG++T GSI  P++   VVGLKP  G
Sbjct:   36 VEDNVKAFLTLDEENARAKAKELDAKIGAEDNGLLFGMPIGVKDNIVTNG-LRTTCASKILANFDPIYDATVVQKLKAADTITIGKLNMDEFA-MGSSNENSGFYAT----KNPWNLDYVPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQPAAYCGVVGLKPTYG 195          
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_BACAA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bacillus anthracis (strain A0248) GN=gatA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.150e-15
Identity = 64/166 (38.55%), Postives = 83/166 (50.00%), Query Frame = 3
Query:  294 IEVNPDALSQADKADYERKVKAAGSLRG------LHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773
            +E N  A    D+ +   K K   +  G      L G+PI +KDNI T   + TT  S  L       DA VV KL+ A  I +GK ++ E++   SS   SGF       KNP+ L   P GSS GSA +VA      SLG++T GSI  P++   VVGLKP  G
Sbjct:   36 VEDNVKAFLTLDEENARAKAKELDAKIGAEDNGLLFGMPIGVKDNIVTNG-LRTTCASKILANFDPIYDATVVQKLKAADTITIGKLNMDEFA-MGSSNENSGFYAT----KNPWNLDYVPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQPAAYCGVVGLKPTYG 195          
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_STRGC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=gatA PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.726e-15
Identity = 70/198 (35.35%), Postives = 104/198 (52.53%), Query Frame = 3
Query:  183 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773
            TI++L     + ++++ +L +  L +I      +   I V+ + AL++A   D     K   +   + GIP+ +KDNI+TK  + TTA S  L       DA  V KL     II+GK ++ E++   SS+  S F       KN +  S  P GSS GSA +VA+    +SLG++T GSI  P+S N VVGLKP  G
Sbjct:    7 TIEELHDLLVKKEISAVELTQATLADIKEREGAVDSFITVSEEEALAKAAALD----AKGIDADNLMSGIPLAVKDNISTKGIL-TTAASKMLYNYKPIFDATSVEKLYGKDMIIVGKTNMDEFAMGGSSEN-SYFKTT----KNAWDGSKVPGGSSGGSATAVASGQVRLSLGSDTGGSIRQPASFNGVVGLKPTYG 194          
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_RHOS4 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=gatA PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.726e-15
Identity = 68/204 (33.33%), Postives = 104/204 (50.98%), Query Frame = 3
Query:  177 EATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPR-DAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLS---ADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773
            E TI D + A  + +L++  L    L  I    PL +  +   P+ AL QA  AD  R   A      L+GIP+ +KD   T+   +  A +  +L+   P  ++ V  KL +AGA++LGK ++ E++   SS   S +    G   NP+ +      P GSS GSA +VA +L   + GT+T GSI  P++   +VG+KP  G
Sbjct:    5 ELTIADARDALAKGELSAVDLTMACLTAIDAGTPL-NAFVHATPEIALDQARAADARRGAGAGA----LNGIPLGIKDLFCTRGVASQAASN--ILKGFKPEYESTVTSKLFEAGAVMLGKLNMDEFA-MGSSNETSCY----GDAVNPWKVDDRRLTPGGSSGGSAAAVAADLCLAATGTDTGGSIRQPAAFTGIVGIKPTYG 196          
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_RHISN (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Rhizobium sp. (strain NGR234) GN=gatA PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.726e-15
Identity = 66/203 (32.51%), Postives = 101/203 (49.75%), Query Frame = 3
Query:  183 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPR-DAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSAD-----PCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773
            TI + +      ++T+ +L + Y+G I   N  ++  + V P+      KA   R   AAG    L GIP+ +KD   T+  ++T A S+ +L    PR ++ V   L   GA++LGK ++ E++   SS   S +    G  KNP+          P GSS GSA +VA  L A +  T+T GSI  P++    VG+KP  G
Sbjct:    8 TIAEARAKLSAKEITAVELTDAYIGAIEAANETINAYVTVTPEKARAMAKASDARI--AAGKAGALEGIPLGIKDLFGTEG-VHTQACSH-ILDGFRPRYESTVTQNLWNDGAVMLGKLNMDEFA-MGSSNETSYY----GPVKNPWRAKGSNMDLVPGGSSGGSAAAVAAYLCAGATATDTGGSIRQPAAFTGTVGIKPTYG 201          
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_RHILW (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=gatA PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.726e-15
Identity = 67/203 (33.00%), Postives = 103/203 (50.74%), Query Frame = 3
Query:  183 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPR-DAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSAD-----PCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773
            TI + +   +  ++T+ +L E Y+  I   N  L+  I+V PD      K   ER   AAG    L GIP+ +KD  AT   ++T A S+ +L    PR ++ V   L   GA++LGK ++ E++   S++     +   G   NP+  +       P GSS GSA +VA +L A +  T+T GSI  P++    VG+KP  G
Sbjct:    8 TIAEARRKLRAKEITALELTEAYISAIDAANGHLNAYIKVTPDLARLMAKNSDERI--AAGKAGDLEGIPLGIKDLFATVG-VHTQACSH-ILDGFEPRYESTVTQNLWDDGAVMLGKLNMDEFAMGSSNE-----TSHYGAVINPWRAAGSNQQLVPGGSSGGSAAAVAAHLCAGATATDTGGSIRQPAAFTGTVGIKPTYG 201          
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_CHLPN (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chlamydia pneumoniae GN=gatA PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.726e-15
Identity = 65/195 (33.33%), Postives = 96/195 (49.23%), Query Frame = 3
Query:  192 DLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEV-NPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773
            +L  A    +LT+  + + +   I      +   I +    AL QA+  D +R       L  L G+P+ +KDNI     + TT  S  L     P DA VV +++K   IILGK ++ E++   S+   S F        NP+ LS  P GSS GSA +V+     V+LG++T GSI  P++   VVG KP+ G
Sbjct:    8 ELAKAVTLGELTATGVTQHFFHRIEEAEGQVGAFISLCKEQALEQAELIDKKRS--RGEPLGKLAGVPVGIKDNIHVTG-LKTTCASRVLENYQPPFDATVVERIKKEDGIILGKLNMDEFA-MGSTTLYSAFHPT----HNPWDLSRVPGGSSGGSAAAVSARFCPVALGSDTGGSIRQPAAFCGVVGFKPSYG 194          
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_BACWK (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bacillus weihenstephanensis (strain KBAB4) GN=gatA PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.726e-15
Identity = 63/166 (37.95%), Postives = 83/166 (50.00%), Query Frame = 3
Query:  294 IEVNPDALSQADKADYERKVKAAGSLRG------LHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773
            +E N  A    D+ +   K K   +  G      L G+PI +KDNI T   + TT  S  L       DA VV KL+ A  + +GK ++ E++   SS   SGF       KNP+ L   P GSS GSA +VA      SLG++T GSI  P++   VVGLKP  G
Sbjct:   36 VEDNVKAFLTLDEENARAKAKELDAKIGAEDNGLLFGMPIGVKDNIVTNG-LRTTCASKILANFDPIYDATVVQKLKAADTVTIGKLNMDEFA-MGSSNENSGFYAT----KNPWNLDYVPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQPAAYCGVVGLKPTYG 195          
The following BLAST results are available for this feature:
BLAST of CK934430 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GATA_BACAN5.150e-1538.55Glutamyl-tRNA(Gln) amidotransferase subunit A OS=B... [more]
GATA_BACAH5.150e-1538.55Glutamyl-tRNA(Gln) amidotransferase subunit A OS=B... [more]
GATA_BACAC5.150e-1538.55Glutamyl-tRNA(Gln) amidotransferase subunit A OS=B... [more]
GATA_BACAA5.150e-1538.55Glutamyl-tRNA(Gln) amidotransferase subunit A OS=B... [more]
GATA_STRGC6.726e-1535.35Glutamyl-tRNA(Gln) amidotransferase subunit A OS=S... [more]
GATA_RHOS46.726e-1533.33Glutamyl-tRNA(Gln) amidotransferase subunit A OS=R... [more]
GATA_RHISN6.726e-1532.51Glutamyl-tRNA(Gln) amidotransferase subunit A OS=R... [more]
GATA_RHILW6.726e-1533.00Glutamyl-tRNA(Gln) amidotransferase subunit A OS=R... [more]
GATA_CHLPN6.726e-1533.33Glutamyl-tRNA(Gln) amidotransferase subunit A OS=C... [more]
GATA_BACWK6.726e-1537.95Glutamyl-tRNA(Gln) amidotransferase subunit A OS=B... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004259_C09 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IIF_C09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934430 ID=CK934430; Name=CK934430; organism=Citrus sinensis; type=EST; length=780bp
GCGGGGATCCATCTCATCCAACTCCGAGCCNNNCAAAGTGACCATCGATG
CATTGCCTAAAAATGGCTACCAGTAGTATCGCAATACTGGCCTTTTCTTT
GTTTTCCCATCTGCTCCTTCCGACTCTTCTAGCCATATCAGCTCAAAGTA
ATGCCATTCATGCATTCCCAATAAGAGAAGCAACCATCAAGGATCTCCAG
CTCGCTTTCAAGCAAAACAAGCTCACGTCCCGGCAGCTGGTTGAATTTTA
CCTCGGAGAAATCCACAGGCTCAACCCGCTGCTTCACGGCGTCATAGAGG
TGAACCCCGATGCACTATCCCAAGCTGATAAGGCTGACTACGAGCGCAAG
GTTAAGGCAGCAGGCTCACTGCGGGGCTTGCACGGGATTCCTATTCTTCT
TAAGGATAACATTGCAACGAAGGACAAGATGAACACCACTGCTGGCTCGT
ATGCTCTGCTCCGCTCAGTCGTGCCCCGGGATGCTGGTGTGGTGGTGAAG
TTGAGGAAAGCTGGTGCCATTATTTTGGGAAAGGCCAGCTTGAGTGAGTG
GTCTAACTTTAGATCCTCCAAAGCACCCAGTGGTTTCAGTGGTAGGGGGG
GCCAGGGAAAGAATCCATATGTTCTATCAGCAGATCCTTGTGGGTCAAGC
AGTGGCTCAGCAATTTCAGTAGCTACAAACTTGGCTGCCGTGTCACTGGG
AACTGAAACGGATGGTTCCATTCTATGTCCGTCCAGTTCTAACTCAGTAG
TGGGACTCAAACCAGCCCTTGGTCTCACCA
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