CK934430
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_CAUSK (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Caulobacter sp. (strain K31) GN=gatA PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.694e-14 Identity = 66/202 (32.67%), Postives = 99/202 (49.01%), Query Frame = 3 Query: 183 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSAD-----PCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 T+K ++ TS +L ++ I L ++E ALS A +D R + AA R L GIP+ +KD T+ + TTA S L V ++ V +L + GA++LGK +L E++ SS S + G NP+ + P GSS GSA +VA +L + T+T GSI P++ VG+KP G Sbjct: 8 TLKGALDGLEKGDFTSVELTRAHIDAIEAARGLNAFLLETPEQALSMAAASDARRALDAA---RPLDGIPLGIKDLFCTQG-VRTTAASKILEPFVPQYESTVTSQLWRDGAVMLGKLNLDEFA-MGSSNETSAY----GPVVNPWRKAGSNQALTPGGSSGGSAAAVAADLCLGATATDTGGSIRQPAAFTGTVGIKPTYG 200
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_BORBU (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Borrelia burgdorferi GN=gatA PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.694e-14 Identity = 65/200 (32.50%), Postives = 100/200 (50.00%), Query Frame = 3 Query: 174 REATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 R+ I D+ LA+K N + LN ++G IE D+L A + D K L L G+ I +KDNI+ +DK + T S L + P DA V+ +L+ GAI++G+ ++ E++ S+ S + YV+ GSS GSA VA A SLG++T GS+ P+S + ++G KP+ G Sbjct: 33 RKCKIYDILLAYKNN---------------YELNKDINGYIEFFDDSLEIAKRYDDCLKNCELEDLP-LIGMLIAVKDNISIQDK-SLTCASEILKGYISPYDATVIKRLKNKGAILIGRTNMDEFA-MGSTCEFSYYGATLNPLNREYVIG----GSSGGSAAVVAAFQAPFSLGSDTGGSVRLPASFSGILGFKPSYG 210
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_STRP3 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus pyogenes serotype M3 GN=gatA PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.437e-14 Identity = 66/198 (33.33%), Postives = 101/198 (51.01%), Query Frame = 3 Query: 183 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDA-LSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 TI++L ++++ +L + L +I + I V+ +A L QA D K S + GIP+ +KDNI+TK + TTA S L DA V I++GK ++ E++ S++ S F + KN + + P GSS GSA +VA+ +SLG++T GSI P++ N VVGLKP G Sbjct: 7 TIEELHDLLVAKEISATELTQKTLEDIKSREEAVGSFITVSEEAALKQAAAID----AKGIDSDNLMSGIPLAVKDNISTKGIL-TTAASKMLYNYEPIFDATSVANAYAKDMIVIGKTNMDEFAMGGSTET-SYFK----KTKNAWDHTKVPGGSSGGSATAVASGQVRLSLGSDTGGSIRQPAAFNGVVGLKPTYG 194
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_STRP1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus pyogenes serotype M1 GN=gatA PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.437e-14 Identity = 65/198 (32.83%), Postives = 103/198 (52.02%), Query Frame = 3 Query: 183 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 TI++L ++++ +L + L +I + I V+ + AL QA D K + + GIP+ +KDNI+TK+ + TTA S L +A V I++GK ++ E++ S++ S F + KN + + P GSS GSA +VA+ +SLG++T GSI P++ NSVVGLKP G Sbjct: 7 TIEELHDLLVAKEISATELTQATLEDIKSREEAVGSFITVSEEVALKQAAAID----AKGIDADNLMSGIPLAVKDNISTKEIL-TTAASKMLYNYEPIFNATSVANAYAKDMIVIGKTNMDEFAMGGSTET-SYFK----KTKNAWDHTKVPGGSSGGSATAVASGQVRLSLGSDTGGSIRQPAAFNSVVGLKPTYG 194
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_PARL1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=gatA PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.437e-14 Identity = 63/206 (30.58%), Postives = 99/206 (48.06%), Query Frame = 3 Query: 171 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSAD-----PCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 + + T+ + A K+ ++TS +L YL E+ L+ + V D + KA + K G L G+P+ +KD TKD + TTA S+ L ++ V L + GA++LGK + E++ S++ + G NP+ P GSS GS+ +VA NL + T+T GSI P++ VGLKP G Sbjct: 4 LTKLTLAGARDALKKKEITSTELTGAYLKEMEAA-AALNAYVTVTADKAMEMAKASDAKLAKGEGG--ALEGLPLGIKDLYCTKDVL-TTACSHILDGFKPAYESTVTSNLWRDGAVMLGKLNNDEFAMGSSNE-----TSHYGSVVNPWRRKGSDAKLVPGGSSGGSSAAVAANLCLAATATDTGGSIRQPAAFTGTVGLKPTYG 200
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_METVS (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=gatA PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.437e-14 Identity = 60/179 (33.52%), Postives = 94/179 (52.51%), Query Frame = 3 Query: 240 VEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALGL 776 V YL +I + + ++ I++N + + + K D E+ K + L+G I +K NI + + S L DA V+ KLR GA+I+G ++ E+++ SG + G KNP L P GSSSGSA +V+ +L ++LG++T GSI P+S VVG KP G+ Sbjct: 6 VSDYLEKIEKSD--INAFIDLNGERVLKEAK-DLEKNEKLKN--KSLYGKIIAVKSNINVEG-YKISCASKTLDNYTGTYDATVIKKLRSEGALIIGMTNMDEFAS-----GSSGETSYYGPTKNPKALDRIPGGSSSGSAAAVSADLCDMALGSDTGGSIRNPASHCGVVGFKPTYGV 173
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_METM6 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=gatA PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.437e-14 Identity = 59/183 (32.24%), Postives = 96/183 (52.46%), Query Frame = 3 Query: 240 VEFYLGEIHRLNPLLHGVIEVNPDAL----SQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALGL 776 V YL +I + + ++ I+VN + + + +K DY + + L+G + +K NI K + S L + DA VV KLR GA+I+G ++ E+++ SG + G KNP + P GSSSGSA +VA +L +++G++T GSI P+S +VG KP+ G+ Sbjct: 6 VSDYLEKIEKSD--VNAFIDVNSEKVLKEAEELEKNDYLKN-------KPLYGKIVAVKSNINVKG-YKISCASKTLEKYTGTYDATVVKKLRLQGALIVGMTNMDEFAS-----GSSGETSYFGPTKNPAAMDRIPGGSSSGSAAAVAADLCDMAIGSDTGGSIRNPASHCGIVGFKPSYGV 173
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_HELHP (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Helicobacter hepaticus GN=gatA PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.437e-14 Identity = 52/130 (40.00%), Postives = 71/130 (54.62%), Query Frame = 3 Query: 384 GIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 G+PIL+KDNI K T S L V P +A V+ KL + G+A++ E++ +++ S G+ KNP S P GSS GSA +VA LA SLG++T GSI P+ VGLKP+ G Sbjct: 45 GVPILIKDNINVKG-WEITCASKILKGYVSPYNASVITKLHENKMCAFGRANMDEFAMGSTTE-----SSCYGRVKNPLDTSRVPGGSSGGSAAAVAAGLAIASLGSDTGGSIRQPAGFCGCVGLKPSYG 168
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_STRPD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus pyogenes serotype M2 (strain MGAS10270) GN=gatA PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.712e-14 Identity = 65/198 (32.83%), Postives = 101/198 (51.01%), Query Frame = 3 Query: 183 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDA-LSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 TI++L ++++ +L + L +I + I V+ +A L QA D K + + GIP+ +KDNI+TK + TTA S L DA V I++GK ++ E++ S++ S F + KN + + P GSS GSA +VA+ +SLG++T GSI P++ N VVGLKP G Sbjct: 7 TIEELHDLLVAKEISATELTQKTLEDIKSREEAVGSFITVSEEAALKQAAAID----AKGIDADNLMSGIPLAVKDNISTKGTL-TTAASKMLYNYEPIFDATSVANAYAKDMIVIGKTNMDEFAMGGSTET-SYFK----KTKNAWDHTKVPGGSSGGSATAVASGQVRLSLGSDTGGSIRQPAAFNGVVGLKPTYG 194
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_RHOS5 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=gatA PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.712e-14 Identity = 67/204 (32.84%), Postives = 108/204 (52.94%), Query Frame = 3 Query: 177 EATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPR-DAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLS---ADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 E TI + + A + +L++ L L I PL + + + P+ AL QA +D R+ + AG+L +GIP+ +KD T+ + A + +L+ P ++ V KL AGA++LGK ++ E++ SS S + G NP+ + P GSS GSA +VA +L + GT+T GSI P++ +VG+KP G Sbjct: 5 ELTIAEARDALAKGELSAVDLTMACLTAIDAGTPL-NAFVHLTPEIALDQARASD-ARRGEGAGAL---NGIPLGIKDLFCTRGVASQAASN--ILKGFKPEYESTVTSKLFAAGAVMLGKLNMDEFA-MGSSNETSCY----GDAVNPWKVDDRKLTPGGSSGGSAAAVAADLCLGATGTDTGGSIRQPAAFTGIVGIKPTYG 196 The following BLAST results are available for this feature:
BLAST of CK934430 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK934430 ID=CK934430; Name=CK934430; organism=Citrus sinensis; type=EST; length=780bpback to top |