CK934430
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_ACIC1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=gatA PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.266e-21 Identity = 70/197 (35.53%), Postives = 107/197 (54.31%), Query Frame = 3 Query: 183 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 T +L ++++ ++ +L I ++P +H + V+ D A +A + ++ A L L G+P+ LKD T+ M TT GS L + P DA VV K+R AG +ILGK ++ E++ SS S F G +NP+ LS P GSS GSA +VA A +++GT+T GSI P++ +VG KP G Sbjct: 8 TAVELAAMIAAREVSAEEVTRAHLDRIAAVDPAVHAFLYVDADGALTAARA-VDARLAAGERLGPLAGVPLALKDVFTTRG-MPTTCGSKILEGWIPPYDATVVQKIRDAGIVILGKTNMDEFA-MGSSTENSAF----GPTRNPWDLSRIPGGSSGGSAAAVAAFEAPLAIGTDTGGSIRQPAAVTGIVGTKPTYG 197
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_THIDA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thiobacillus denitrificans (strain ATCC 25259) GN=gatA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.653e-21 Identity = 77/194 (39.69%), Postives = 105/194 (54.12%), Query Frame = 3 Query: 198 QLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALGL 776 QLA KQ ++SR+L + YL I LNP ++ I V+P+ L++A AD + A G+ L G+PI KD T D TT GS L V P DA V+ + + AG LGK ++ E++ SS S F G KNP+ P GSS G+A VA +A + GT+T GSI P++ + GLKP GL Sbjct: 12 QLAAKQ--VSSRELAQQYLDRIAALNPTINAFITVDPEKTLAEAAAAD---ALIAGGAAGPLTGVPIAHKDIFCT-DGWLTTCGSKMLANFVAPYDAHVIERCKAAGMPSLGKTNMDEFA-MGSSNETSFF----GAVKNPWNAGYVPGGSSGGAAACVAARMAPAATGTDTGGSIRQPAALCGITGLKPTYGL 194
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_PSESM (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pseudomonas syringae pv. tomato GN=gatA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.653e-21 Identity = 71/202 (35.15%), Postives = 105/202 (51.98%), Query Frame = 3 Query: 171 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 + + T+ ++ + K +S +L L I +L+P L+ I + D A++QA AD R AAG L G P+ KD T+ + T+ GS L P DA VV KL AG + LGK ++ E++ +++ S G KNP+ L P GSS GSA +VA L + GT+T GSI P++ ++ GLKP G Sbjct: 1 MHQMTLAEIARGLAEKKFSSEELTRVLLSRIAQLDPQLNSFISLTEDLAITQAQAADARR---AAGENGPLLGAPLAHKDLFCTQG-IRTSCGSRMLDNFKAPYDATVVSKLASAGTVTLGKTNMDEFAMGSANE-----SSHYGAVKNPWNLECVPGGSSGGSAAAVAARLLPAATGTDTGGSIRQPAALTNLTGLKPTYG 193
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_BIFLO (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bifidobacterium longum GN=gatA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.653e-21 Identity = 76/191 (39.79%), Postives = 103/191 (53.93%), Query Frame = 3 Query: 204 AFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 A K+ +TSR+LVE +L I P + ++V+ D AL QAD D + + +L L G+PI +KD I TK + TTA S L V P DA V+ KL+ AG ILGK +L E++ SS S + NP+ P GS GSA +VA A ++LGT+T GSI P + VG+KP G Sbjct: 19 AVKKGDVTSRELVEAHLKVIEAAEPSIKAFLKVSGDVALEQADAFD-AKSAEDKAALPELAGVPIAIKDMIVTKG-IETTAASKILEGWVPPYDATVIEKLKAAGMPILGKTNLDEFAQ-GSSTEHSAYQTT----HNPWDTERVPGGSGGGSASAVAAFEAPIALGTDTGGSIRQPGALTGTVGVKPTYG 202
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_BIFLD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bifidobacterium longum (strain DJO10A) GN=gatA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.653e-21 Identity = 76/191 (39.79%), Postives = 103/191 (53.93%), Query Frame = 3 Query: 204 AFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 A K+ +TSR+LVE +L I P + ++V+ D AL QAD D + + +L L G+PI +KD I TK + TTA S L V P DA V+ KL+ AG ILGK +L E++ SS S + NP+ P GS GSA +VA A ++LGT+T GSI P + VG+KP G Sbjct: 19 AVKKGDVTSRELVEAHLKVIEAAEPSIKAFLKVSGDVALEQADAFD-AKSAEDKAALPELAGVPIAIKDMIVTKG-IETTAASKILEGWVPPYDATVIEKLKAAGMPILGKTNLDEFAQ-GSSTEHSAYQTT----HNPWDTERVPGGSGGGSASAVAAFEAPIALGTDTGGSIRQPGALTGTVGVKPTYG 202
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_AZOSB (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Azoarcus sp. (strain BH72) GN=gatA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.653e-21 Identity = 71/200 (35.50%), Postives = 110/200 (55.00%), Query Frame = 3 Query: 180 ATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALGL 776 A++ +L+ A +++S +L +L I NP L+ I ++ + AL+ A AD AAG+ L GIP+ KD T+ + TT GS L V P DA VV +L+ AGA+ LGK ++ E++ S++ S G +NP+ + P GSS GSA +VA L ++ G++T GS+ P+S V G+KP G+ Sbjct: 4 ASVSELRRALDTRQVSSVELATLFLDRIAERNPALNAFITIDREGALAAARAADARI---AAGTAGPLTGIPLAHKDLFCTEGVL-TTCGSKMLADFVSPYDAHVVSRLKDAGAVSLGKTNMDEFAMGSSNE-----SSHYGAVRNPWDTTRIPGGSSGGSAAAVAARLVPLATGSDTGGSVRQPASHTGVTGIKPTYGV 194
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_SYNPX (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus sp. (strain WH8102) GN=gatA PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.159e-21 Identity = 72/198 (36.36%), Postives = 111/198 (56.06%), Query Frame = 3 Query: 183 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 TI + + ++SR+LV+ +L + + P L+ +EV + A + AD+ D R A L L G+P+ +KDN+ T+ + TT S L + V P ++ V +L AGA+++GK +L E++ S++ S F G KNP+ + P GSS GSA +VA+ SLG++T GSI P+S VVGLKP G Sbjct: 2 TISAWRQRLQAGGVSSRELVDEHLQRLEQSEPSLNAFVEVTAERARADADRVDQARA--AGEDLGPLAGLPLAIKDNLCTRG-VRTTCSSRMLEQFVPPYESTVTDRLWGAGAVLVGKTNLDEFAMGGSTET-SAF----GATKNPWNIEHVPGGSSGGSAAAVASGSCLASLGSDTGGSIRQPASFCGVVGLKPTYG 191
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_PELCD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=gatA PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.159e-21 Identity = 77/202 (38.12%), Postives = 105/202 (51.98%), Query Frame = 3 Query: 171 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDA-LSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 + + TI +LQ K +++SR+L + +L I + + I + +A L A+ AD AAG+ L GIP+ LKD T+ M TT S L V P V KL++ A+ILGK ++ E++ SS S F G KNP+ P GSS GSA VA A +LGT+T GSI P+S VVGLKP G Sbjct: 3 LTDLTIHELQALLKNREISSRELTQAFLTRIADTDQRIGAFITQSEEAALKNAEAADARL---AAGNAASLTGIPLALKDIFITEG-MRTTCASRILDNFVPPYSGTAVRKLQEQDAVILGKLNMDEFA-MGSSNENSAF----GTVKNPWNQDCVPGGSSGGSAACVAARQAVATLGTDTGGSIRQPASHCGVVGLKPTYG 195
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_EXIS2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=gatA PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.159e-21 Identity = 75/200 (37.50%), Postives = 105/200 (52.50%), Query Frame = 3 Query: 177 EATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALGL 776 E +K+L K ++ +LV+ I R++ + + +N DA QA + D K +A L G+PI +KDNI TK M TT GS L V DA VV +L +AGAI +GK ++ E++ SS S + +NP+ P GSS GSA +VA SLG++T GSI P++ VVGLKP GL Sbjct: 5 EHGVKNLHTLVKDGEVKVSELVQESFDRIDRVDGKIGAFLSLNEDAFEQAKRMDEIAKHEA----NPLFGLPIGVKDNIVTKG-MTTTCGSKFLENFVPAHDATVVERLHEAGAITIGKLNMDEFA-MGSSNENSAYK----PVRNPWNTKHVPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQPAAYCGVVGLKPTYGL 194
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_DECAR (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Dechloromonas aromatica (strain RCB) GN=gatA PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.159e-21 Identity = 74/200 (37.00%), Postives = 111/200 (55.50%), Query Frame = 3 Query: 180 ATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLR-KAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALGL 776 A++K+L LA K++S +L +L I RLNP L+ + V+ + Q + D + ++ AAG+ L GIPI KD + ++T GS L V P DA V+ K+ +AG + LGK ++ E++ SS S F G +NP+ P GSS GSA +VA LA + GT+T GSI P++ ++ GLKP G+ Sbjct: 4 ASLKELSLALAAKKVSSVELSSLFLDRIERLNPTLNAFVTVDREKSLQMAR-DADARI-AAGTAGPLTGIPIAQKDIFCAEGWLST-CGSKMLANFVSPYDATVIRKMHAEAGLVSLGKTNMDEFA-MGSSNETSFF----GSVRNPWDTQRVPGGSSGGSAAAVAARLAPAATGTDTGGSIRQPAALCNLTGLKPTYGV 195 The following BLAST results are available for this feature:
BLAST of CK934430 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934430 ID=CK934430; Name=CK934430; organism=Citrus sinensis; type=EST; length=780bpback to top |