CK934430
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_THICR (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thiomicrospira crunogena (strain XCL-2) GN=gatA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.071e-20 Identity = 72/198 (36.36%), Postives = 105/198 (53.03%), Query Frame = 3 Query: 183 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 ++K++ + ++TS L + YL I + + L+ + V P+ A+ A +AD E + G L L GIP+ KD T D + TT GS L + P DA VV R G ILGK ++ E++ SS+ S G KNP+ L A P GSS GSA +A LA ++ G++T GSI P+S + G+KP G Sbjct: 5 SVKEMSEKLRNKEITSVALTQHYLDRIDQYDGELNAYVTVTPELAMEMARQAD-EMIAEGKGGL--LTGIPVAHKDIFCTLD-VKTTCGSKMLDNFIAPYDAKVVEASRALGMPILGKTNMDEFAMGSSSE-----SSYYGATKNPWDLKAVPGGSSGGSAAVIAAGLAPLATGSDTGGSIRQPASFCGITGIKPTYG 193
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_PSEP1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=gatA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.071e-20 Identity = 71/202 (35.15%), Postives = 103/202 (50.99%), Query Frame = 3 Query: 171 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 + + T+ ++ +S +L L I +L+P ++ I + D AL+QA AD R AAG L G PI KD T + T+ GS L P DA VV KL +AG + LGK ++ E++ +++ S G KNP+ L P GSS GSA +VA L + GT+T GSI P++ ++ GLKP G Sbjct: 1 MHQLTLAEIARGLADKSFSSEELTGALLARIKQLDPQINSFISITDDLALAQARAADARR---AAGETGVLLGAPIAHKDLFCTNG-VRTSCGSKMLDNFKAPYDATVVAKLAEAGMVTLGKTNMDEFAMGSANE-----SSHYGAVKNPWNLEHVPGGSSGGSAAAVAARLLPATTGTDTGGSIRQPAALTNLTGLKPTYG 193
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_PROMA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Prochlorococcus marinus GN=gatA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.071e-20 Identity = 71/189 (37.57%), Postives = 106/189 (56.08%), Query Frame = 3 Query: 213 QNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGS-LRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 + +++S +L+ + I + LH + +N + A + A K D + +AAG L L G+P +KDN+ TK + TT S L + P ++ V +L KAG I+LGK +L E++ SS S F G KNP+ ++ P GSS GSA +VA+ L +LG++T GSI P+S VVGLKP G Sbjct: 12 KGEVSSLELINQQINRIEEVENTLHSYLYLNHEKARASAIKID---EARAAGEELPPLAGVPFAIKDNLCTKG-IPTTCSSKMLEEFIPPYESTVTQRLWKAGGILLGKTNLDEFA-MGSSTETSAF----GPTKNPWDITRVPGGSSGGSAAAVASGLCTAALGSDTGGSIRQPASFCGVVGLKPTYG 191
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_ACIBL (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Acidobacteria bacterium (strain Ellin345) GN=gatA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.071e-20 Identity = 76/202 (37.62%), Postives = 107/202 (52.97%), Query Frame = 3 Query: 171 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 I TI ++A ++ + T+ + E + +I + ++ + ++ D AL+QA K D L L G+P+ +KD I+TK + TTAGS L + P DA VV KL AGA+ILGK + E++ SS S + G +NP S P GSS GSA VA A SLG++T GSI P+S VVGL P G Sbjct: 3 INVLTIDATRIAIQERQATATAIAESFYKKIEAEDGEINAYLTLSRDRALAQAAKID--AIADRGDDLPRLAGLPVAIKDVISTKG-VRTTAGSKILEEFIAPYDATVVQKLEAAGAVILGKTNCDEFA-MGSSNENSAY----GPVRNPRDKSRVPGGSSGGSAAVVAAGTAVTSLGSDTGGSIRQPASFCGVVGLMPTYG 196
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_SYNY3 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechocystis sp. (strain PCC 6803) GN=gatA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.399e-20 Identity = 71/198 (35.86%), Postives = 111/198 (56.06%), Query Frame = 3 Query: 186 IKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVN-PDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALGL 776 I+ L ++++ + + L I ++ L ++V P A++QA+K D + + A + L GIPI +KDN+ TK + TT S L V P ++ V KL+KAGA+++GK +L E++ SS SG+ NP+ L+ P GSS GSA +VA + ++LG++T GSI P+S VVG+KP GL Sbjct: 4 IRALHQQLIDQEISAVAVAQASLARIEAVDDRLKSFLQVTAPQAIAQAEKVDAQ--IAAGEPIGLLAGIPIGIKDNLCTKGIV-TTCASQILRGFVPPYESTVTEKLQKAGAVMVGKTNLDEFA-MGSSTENSGYQVTA----NPWDLTRVPGGSSGGSAAAVAADECLIALGSDTGGSIRQPASLCGVVGMKPTYGL 193
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_SYNPW (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus sp. (strain WH7803) GN=gatA PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.827e-20 Identity = 69/187 (36.90%), Postives = 108/187 (57.75%), Query Frame = 3 Query: 219 KLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGS-LRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 ++++R+L + +L I + P +H +EV + A + AD+ D + +A+G L L GIP+ +KDN+ T+ + TT S L + V P ++ V +L AGA++LGK +L E++ S++ S F G NP+ P GSS GSA +VA+ S+G++T GSI P+S VVGLKP G Sbjct: 14 EVSARELTDHHLARIEAVEPGIHAFLEVTAERARADADRVD---EARASGEDLPPLAGIPLAIKDNLCTRG-VRTTCSSRMLEQFVPPYESTVTERLWAAGAVLLGKTNLDEFAMGGSTET-SAF----GPTANPWNPEHVPGGSSGGSAAAVASGECLASIGSDTGGSIRQPASFCGVVGLKPTYG 191
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_ALCBS (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=gatA PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.827e-20 Identity = 71/200 (35.50%), Postives = 108/200 (54.00%), Query Frame = 3 Query: 183 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKV-KAAGSLRGL-HGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 T+ +L+ +SR+L E +L I + + L+ + V + AL+QAD AD +A+ S+ GL G+PI KD T+ + T+ GS L + P A VV K+ GA++LGK ++ E++ SS S + G KNP+ L P GSS G+A + LA + GT+T GSI P++ N++ GLKP G Sbjct: 5 TLTELKAGLAAGDFSSRELTEHFLARIKQYDGELNSFVTVTEEQALAQADAADATLATNRASSSVSGLLTGLPIAHKDIFCTEG-VRTSCGSKMLDNFIAPYTATVVEKMAAEGAVMLGKTNMDEFA-MGSSNETSYY----GPVKNPWDLERVPGGSSGGAAACLGARLAPAATGTDTGGSIRQPAALNNITGLKPTYG 198
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_DEIDV (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=gatA PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.387e-20 Identity = 65/164 (39.63%), Postives = 94/164 (57.32%), Query Frame = 3 Query: 282 LHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 L+ ++ +N A +QA A+ R++ A G L G+P+++KDNI TT GS L V P A +L AGA+I+GKA++ E++ S++ S G NP+ LS P GSS GSA++VA NL VSLG++T GS+ P++ V GLKP G Sbjct: 38 LNALVSLNEQAGAQA--AEVSRRL-AGGEALPLAGVPVIVKDNINVSGT-RTTCGSRILATYVSPYTATAAQRLIDAGAVIVGKANMDEFAMGSSTE-----SSASGPTLNPWDLSRVPGGSSGGSAVAVAANLTPVSLGSDTGGSVRQPAALTGVYGLKPTYG 192
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_TRIEI (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Trichodesmium erythraeum (strain IMS101) GN=gatA PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.117e-20 Identity = 75/200 (37.50%), Postives = 110/200 (55.00%), Query Frame = 3 Query: 180 ATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLHGVIEVNPD-ALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALGL 776 A+I D+ + ++ ++ + L I++L P L I V + A++QA + D K+ A + L GIPI +KDNI T+ + TT GS L + P ++ V KL AGAIILGK +L E+ SS S + NP+ + P GSS GSA +VA+ + V+LG++T GSI P+S VVG+KP GL Sbjct: 2 ASISDIHQQLISKQRSAVEITQEALENINQLEPKLKSFICVTAEKAIAQARQVD--AKIAAGEKIGLLTGIPIAVKDNICTRG-IPTTCGSKILQNFIPPYESTVTQKLVDAGAIILGKTNLDEFG-MGSSTENSAYQVT----TNPWDNTRVPGGSSGGSAAAVASAESVVALGSDTGGSIRQPASFCGVVGIKPTYGL 193
BLAST of CK934430 vs. ExPASy Swiss-Prot
Match: GATA_RALPJ (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Ralstonia pickettii (strain 12J) GN=gatA PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.117e-20 Identity = 77/201 (38.31%), Postives = 102/201 (50.75%), Query Frame = 3 Query: 180 ATIKDLQLAFKQNKLTSRQLVEFYLGEIH---RLNPLLHGVIEVNPDALSQADKADYERKVKAAGSLRGLHGIPILLKDNIATKDKMNTTAGSYALLRSVVPRDAGVVVKLRKAGAIILGKASLSEWSNFRSSKAPSGFSGRGGQGKNPYVLSADPCGSSSGSAISVATNLAAVSLGTETDGSILCPSSSNSVVGLKPALG 773 +TIK L ++++ +L YL I LN H E L+QA AD AAG+ L G+PI KD T+ TAGS L V P DA VV +L AG + LGK ++ E++ SS S F G KNP+ L P GSS GSA +VA +LA + GT+T GSI P+S + + G+KP G Sbjct: 4 STIKALSAQLAAKEVSAEELARHYLSRIEAGAHLNAFTHVDAEAT---LAQARAADARI---AAGNAAPLTGVPIAHKDVFVTRG-WRATAGSKMLGNYVSPFDATVVERLGAAGMVTLGKTNMDEFA-MGSSNENSAF----GAVKNPWNLEHVPGGSSGGSAAAVAADLAPAATGTDTGGSIRQPASFSGITGIKPTYG 192 The following BLAST results are available for this feature:
BLAST of CK934430 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934430 ID=CK934430; Name=CK934430; organism=Citrus sinensis; type=EST; length=780bpback to top |