CK934457

Overview
NameCK934457
Unique NameCK934457
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length685
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934457 vs. ExPASy Swiss-Prot
Match: ERF38_ARATH (Ethylene-responsive transcription factor ERF038 OS=Arabidopsis thaliana GN=ERF038 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.516e-12
Identity = 33/59 (55.93%), Postives = 45/59 (76.27%), Query Frame = 2
Query:  488 HYRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFETAVEAAKAYDNAAFRLRGSKAILNFP 664
            ++RGVR R WG++ +EIR+P +K SR+WLGTF TA  AA+A+D AA  ++G  A LNFP
Sbjct:   44 NFRGVRMRQWGKWVSEIREPKKK-SRIWLGTFSTAEMAARAHDVAALAIKGGSAHLNFP 101          
BLAST of CK934457 vs. ExPASy Swiss-Prot
Match: DRE2E_ARATH (Dehydration-responsive element-binding protein 2E OS=Arabidopsis thaliana GN=DREB2E PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.286e-12
Identity = 36/70 (51.43%), Postives = 47/70 (67.14%), Query Frame = 2
Query:  491 YRGVRRRPWGRYAAEIRDP-------NRKGSRVWLGTFETAVEAAKAYDNAAFRLRGSKAILNFPLEVGG 679
            +RGVR+R WG++ AEIR+P       + +  R+WLGTF TA EAA AYD AA  + G  A LNFP ++GG
Sbjct:   70 FRGVRQRVWGKWVAEIREPVSHRGANSSRSKRLWLGTFATAAEAALAYDRAASVMYGPYARLNFPEDLGG 139          
BLAST of CK934457 vs. ExPASy Swiss-Prot
Match: ERF39_ARATH (Ethylene-responsive transcription factor ERF039 OS=Arabidopsis thaliana GN=ERF039 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.292e-12
Identity = 33/62 (53.23%), Postives = 46/62 (74.19%), Query Frame = 2
Query:  479 EEKHYRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFETAVEAAKAYDNAAFRLRGSKAILNFP 664
            ++ ++RGVR R WG++ +EIR+P RK SR+WLGTF T   AA+A+D AA  ++G  A LNFP
Sbjct:   36 KQPNFRGVRMRQWGKWVSEIREP-RKKSRIWLGTFSTPEMAARAHDVAALAIKGGSAHLNFP 96          
BLAST of CK934457 vs. ExPASy Swiss-Prot
Match: ERF15_ARATH (Ethylene-responsive transcription factor ERF015 OS=Arabidopsis thaliana GN=ERF015 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.606e-12
Identity = 31/62 (50.00%), Postives = 45/62 (72.58%), Query Frame = 2
Query:  485 KHYRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFETAVEAAKAYDNAAFRLRGSKAILNFPLE 670
            K YRGVR+R WG++ +EIR P + G R+WLG+++   +AA+AYD A F +RG K + NFP +
Sbjct:   25 KCYRGVRKRSWGKWVSEIRVP-KTGRRIWLGSYDAPEKAARAYDAALFCIRGEKGVYNFPTD 85          
BLAST of CK934457 vs. ExPASy Swiss-Prot
Match: ERF13_ARATH (Ethylene-responsive transcription factor ERF013 OS=Arabidopsis thaliana GN=ERF013 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.606e-12
Identity = 34/60 (56.67%), Postives = 43/60 (71.67%), Query Frame = 2
Query:  485 KHYRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFETAVEAAKAYDNAAFRLRGSKAILNFP 664
            K Y+GVR R WG +  EIR PN+K +R+WLG++ TA  AA+AYD A   L+G KA LNFP
Sbjct:   41 KKYKGVRMRSWGSWVTEIRAPNQK-TRIWLGSYSTAEAAARAYDAALLCLKGPKANLNFP 99          
BLAST of CK934457 vs. ExPASy Swiss-Prot
Match: DRE1A_ARATH (Dehydration-responsive element-binding protein 1A OS=Arabidopsis thaliana GN=DREB1A PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 5.606e-12
Identity = 36/63 (57.14%), Postives = 47/63 (74.60%), Query Frame = 2
Query:  479 EEKH--YRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFETAVEAAKAYDNAAFRLRGSKAILNF 661
            E +H  YRGVRRR  G++  E+R+PN+K +R+WLGTF+TA  AA+A+D AA  LRG  A LNF
Sbjct:   45 ETRHPIYRGVRRRNSGKWVCEVREPNKK-TRIWLGTFQTAEMAARAHDVAALALRGRSACLNF 106          
BLAST of CK934457 vs. ExPASy Swiss-Prot
Match: DRE1C_ORYSJ (Dehydration-responsive element-binding protein 1C OS=Oryza sativa subsp. japonica GN=DREB1C PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.321e-12
Identity = 39/64 (60.94%), Postives = 47/64 (73.44%), Query Frame = 2
Query:  479 EEKH--YRGVRRR-PWGRYAAEIRDPNRKGSRVWLGTFETAVEAAKAYDNAAFRLRGSKAILNF 661
            E +H  YRGVRRR P GR+  E+R+PN+K SR+WLGTF TA  AA+A+D AA  LRG  A LNF
Sbjct:   28 ETRHPVYRGVRRRGPAGRWVCEVREPNKK-SRIWLGTFATAEAAARAHDVAALALRGRGACLNF 90          
BLAST of CK934457 vs. ExPASy Swiss-Prot
Match: DRE1C_ORYSI (Dehydration-responsive element-binding protein 1C OS=Oryza sativa subsp. indica GN=DREB1C PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.321e-12
Identity = 39/64 (60.94%), Postives = 47/64 (73.44%), Query Frame = 2
Query:  479 EEKH--YRGVRRR-PWGRYAAEIRDPNRKGSRVWLGTFETAVEAAKAYDNAAFRLRGSKAILNF 661
            E +H  YRGVRRR P GR+  E+R+PN+K SR+WLGTF TA  AA+A+D AA  LRG  A LNF
Sbjct:   28 ETRHPVYRGVRRRGPAGRWVCEVREPNKK-SRIWLGTFATAEAAARAHDVAALALRGRGACLNF 90          
BLAST of CK934457 vs. ExPASy Swiss-Prot
Match: ERF70_ARATH (Ethylene-responsive transcription factor ERF070 OS=Arabidopsis thaliana GN=ERF070 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.562e-12
Identity = 37/66 (56.06%), Postives = 44/66 (66.67%), Query Frame = 2
Query:  482 EKHYRGVRRRPWGRYAAEIRDPNR----KGSRVWLGTFETAVEAAKAYDNAAFRLRGSKAILNFPL 667
            EK YRGVR+RPWG++ AEIR        +  R+WLGTF TA EAA AYDNA+ +L G  A  NF L
Sbjct:   76 EKKYRGVRQRPWGKWVAEIRCGRGACKGRRDRLWLGTFNTAEEAALAYDNASIKLIGPHAPTNFGL 141          
BLAST of CK934457 vs. ExPASy Swiss-Prot
Match: DRE1B_ARATH (Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana GN=DREB1B PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.249e-11
Identity = 35/63 (55.56%), Postives = 48/63 (76.19%), Query Frame = 2
Query:  479 EEKH--YRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFETAVEAAKAYDNAAFRLRGSKAILNF 661
            E +H  YRGVR+R  G++ +E+R+PN+K +R+WLGTF+TA  AA+A+D AA  LRG  A LNF
Sbjct:   42 ETRHPIYRGVRQRNSGKWVSEVREPNKK-TRIWLGTFQTAEMAARAHDVAALALRGRSACLNF 103          
The following BLAST results are available for this feature:
BLAST of CK934457 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
ERF38_ARATH2.516e-1255.93Ethylene-responsive transcription factor ERF038 OS... [more]
DRE2E_ARATH3.286e-1251.43Dehydration-responsive element-binding protein 2E ... [more]
ERF39_ARATH4.292e-1253.23Ethylene-responsive transcription factor ERF039 OS... [more]
ERF15_ARATH5.606e-1250.00Ethylene-responsive transcription factor ERF015 OS... [more]
ERF13_ARATH5.606e-1256.67Ethylene-responsive transcription factor ERF013 OS... [more]
DRE1A_ARATH5.606e-1257.14Dehydration-responsive element-binding protein 1A ... [more]
DRE1C_ORYSJ7.321e-1260.94Dehydration-responsive element-binding protein 1C ... [more]
DRE1C_ORYSI7.321e-1260.94Dehydration-responsive element-binding protein 1C ... [more]
ERF70_ARATH9.562e-1256.06Ethylene-responsive transcription factor ERF070 OS... [more]
DRE1B_ARATH1.249e-1155.56Dehydration-responsive element-binding protein 1B ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004258_G07 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IF_G07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934457 ID=CK934457; Name=CK934457; organism=Citrus sinensis; type=EST; length=685bp
GGGGAAAATACACCAAACCAATTTCCATTTACATTTCATCTCATCTTCAA
TACCAACTGTAGCTTTTCTTTTAAATATGGCATCTCTGAATGAAGCATCA
ACTTTAGAACTCATCAGCCAGTATCTTCTCGCTGATCAGTACTTTACTTC
TTCAATTGATCATACCCATAGCTTCAAAAATATCTCAAACCTTCCTCAAA
GCCCGAGCTTATTCAACAACCCAACAACAACTACAACAGCAACAACAGTT
ACTACTACAACTGATCGTGATAATATAAACAGCAGAAACAAGCCTTCAAG
CACTTTAAAACAACGGAAGCCGGCCTGTGTAAAAAACGTAACCATACCCC
AAACTACAAGCTTCAATTTGATGAGCTGCTCCAATGTTAATGATGATGCT
GATAACCCAGTTGCTGTGAAAAATAAAGATCCAGATGCTGCTGCTGATAA
TAATACTAATAATAATAATAAAAATAATGAGGAAAAGCATTACAGAGGAG
TAAGGAGACGGCCGTGGGGCAGGTATGCAGCTGAAATCCGGGACCCGAAT
AGAAAAGGGAGCCGGGTTTGGCTTGGGACTTTTGAAACTGCCGTGGAAGC
CGCCAAAGCTTATGACAACGCTGCGTTTAGGCTGCGTGGAAGCAAAGCGA
TATTGAATTTCCCTCTCGAAGTTGGCGGGACTTTG
back to top