CK934466
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934466 vs. ExPASy Swiss-Prot
Match: RB11C_DICDI (Ras-related protein Rab-11C OS=Dictyostelium discoideum GN=rab11C PE=1 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 5.803e-32 Identity = 68/157 (43.31%), Postives = 100/157 (63.69%), Query Frame = 1 Query: 268 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEI 738 K+V++GDS VGKS ++ RF R +F +K T+G F +++I + D+ T+ + WDTAGQER+ A+ YYRG YDITS SF W+ EL++ DI++ +VGNK+DL REVP ++ +AE N + F+ETSA + N+NQ FE + Sbjct: 12 KIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEI-DNKTITAQCWDTAGQERFRAVTSGYYRGAVGAMIVYDITSKISFKNVTRWLNELREMAEQDILIMMVGNKSDLEMSREVPTKEAQAFAESNKISFLETSALNSTNVNQSFERL 167
BLAST of CK934466 vs. ExPASy Swiss-Prot
Match: RAB8_DISOM (Ras-related protein Rab-8 OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 5.803e-32 Identity = 65/159 (40.88%), Postives = 102/159 (64.15%), Query Frame = 1 Query: 268 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAK 744 KL+L+GDSGVGK+C++ RF F+ T T+G F +T+ L D +K +IWDTAGQER+ + YYRG YDIT+ SF+ + W++ +++H S D+ ++GNK D++EKR+V + G + A G+ F+ETSAK++ N+ + F +A+ Sbjct: 10 KLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTVEL-DGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMKVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNEKRQVSKERGEKLAIDYGIKFLETSAKSSINVEEAFITLAR 167
BLAST of CK934466 vs. ExPASy Swiss-Prot
Match: RAB8B_RAT (Ras-related protein Rab-8B OS=Rattus norvegicus GN=Rab8b PE=1 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 5.803e-32 Identity = 65/159 (40.88%), Postives = 102/159 (64.15%), Query Frame = 1 Query: 268 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAK 744 KL+L+GDSGVGK+C++ RF F+ T T+G F +TI L D +K +IWDTAGQER+ + YYRG YDIT+ SF+ + W++ +++H S D+ ++GNK D+++KR+V + G + A G+ F+ETSAK++ N+ + F +A+ Sbjct: 10 KLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIEL-DGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLAR 167
BLAST of CK934466 vs. ExPASy Swiss-Prot
Match: RAB8B_PONAB (Ras-related protein Rab-8B OS=Pongo abelii GN=RAB8B PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 5.803e-32 Identity = 65/159 (40.88%), Postives = 102/159 (64.15%), Query Frame = 1 Query: 268 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAK 744 KL+L+GDSGVGK+C++ RF F+ T T+G F +TI L D +K +IWDTAGQER+ + YYRG YDIT+ SF+ + W++ +++H S D+ ++GNK D+++KR+V + G + A G+ F+ETSAK++ N+ + F +A+ Sbjct: 10 KLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIEL-DGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLAR 167
BLAST of CK934466 vs. ExPASy Swiss-Prot
Match: RAB8B_MOUSE (Ras-related protein Rab-8B OS=Mus musculus GN=Rab8b PE=1 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 5.803e-32 Identity = 65/159 (40.88%), Postives = 102/159 (64.15%), Query Frame = 1 Query: 268 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAK 744 KL+L+GDSGVGK+C++ RF F+ T T+G F +TI L D +K +IWDTAGQER+ + YYRG YDIT+ SF+ + W++ +++H S D+ ++GNK D+++KR+V + G + A G+ F+ETSAK++ N+ + F +A+ Sbjct: 10 KLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIEL-DGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLAR 167
BLAST of CK934466 vs. ExPASy Swiss-Prot
Match: RAB26_RAT (Ras-related protein Rab-26 OS=Rattus norvegicus GN=Rab26 PE=2 SV=2) HSP 1 Score: 138.272 bits (347), Expect = 5.803e-32 Identity = 72/176 (40.91%), Postives = 113/176 (64.20%), Query Frame = 1 Query: 238 GSSDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKV-TVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPRPS 762 G+ D ++ K++L+GDSGVGK+C+++RF G F + + TVG F ++ + + D VK +IWDTAGQER+ ++ YYR YDIT+ DSF+ Q W+ E+Q++ D+V+ L+GNK D ++R V +DG + A++ G+ F+ETSAK+ N++ F IAK L + S Sbjct: 56 GTGDFYDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDV-DGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDITNKDSFDNIQAWLTEIQEYAQQDVVLMLLGNKVDSTQERVVKREDGEKLAKEYGLPFMETSAKSGLNVDLAFTAIAKELKQRS 230
BLAST of CK934466 vs. ExPASy Swiss-Prot
Match: RAB8B_HUMAN (Ras-related protein Rab-8B OS=Homo sapiens GN=RAB8B PE=1 SV=2) HSP 1 Score: 137.887 bits (346), Expect = 7.579e-32 Identity = 65/159 (40.88%), Postives = 102/159 (64.15%), Query Frame = 1 Query: 268 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAK 744 KL+L+GDSGVGK+C++ RF F+ T T+G F +TI L D +K +IWDTAGQER+ + YYRG YDIT+ SF+ + W++ +++H S D+ ++GNK D+++KR+V + G + A G+ F+ETSAK++ N+ + F +A+ Sbjct: 10 KLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIEL-DGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLAR 167
BLAST of CK934466 vs. ExPASy Swiss-Prot
Match: RAB2B_MAIZE (Ras-related protein Rab-2-B OS=Zea mays GN=RAB2B PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 7.579e-32 Identity = 61/158 (38.61%), Postives = 104/158 (65.82%), Query Frame = 1 Query: 268 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIA 741 K +++GD+GVGKSC++L+F +F P +T+G F ++ I + D+ +K +IWDTAGQE + ++ YYRG YDIT ++FN W+++ ++H + ++ + LVGNK DL +R V ++G ++A+++G+ F+E SAKTA N+ + F + A Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNKCDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTA 164
BLAST of CK934466 vs. ExPASy Swiss-Prot
Match: RAB1B_DICDI (Ras-related protein Rab-1B OS=Dictyostelium discoideum GN=rab1B PE=2 SV=2) HSP 1 Score: 137.887 bits (346), Expect = 7.579e-32 Identity = 69/163 (42.33%), Postives = 99/163 (60.74%), Query Frame = 1 Query: 268 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 756 KL+L+GDSGVGKSC++LRF + + T+G F +TI L D +K +IWDTAGQER+ + YYRG YD+T SFN + W++E+Q++ + LVGNK DL EK+ V EYA+ G+ F+ETSAK++ N+ Q F +A + + Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTINL-DGKIIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDHVSFNNVKQWMQEIQRYACDSVTRLLVGNKCDLIEKKIVDTSTAREYADSVGIPFLETSAKSSANVEQAFMIMASEIKK 171
BLAST of CK934466 vs. ExPASy Swiss-Prot
Match: RAB1A_PIG (Ras-related protein Rab-1A OS=Sus scrofa GN=RAB1A PE=2 SV=3) HSP 1 Score: 137.887 bits (346), Expect = 7.579e-32 Identity = 72/165 (43.64%), Postives = 100/165 (60.61%), Query Frame = 1 Query: 268 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLF----EEIAKRL 750 KL+L+GDSGVGKSC++LRF + + T+G F +TI L D T+K +IWDTAGQER+ + YYRG YD+T SFN + W++E+ ++ S ++ LVGNK DL K+ V E+A+ G+ F+ETSAK A N+ Q F EI KR+ Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQGSFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRM 176 The following BLAST results are available for this feature:
BLAST of CK934466 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934466 ID=CK934466; Name=CK934466; organism=Citrus sinensis; type=EST; length=892bpback to top |