CK934466
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934466 vs. ExPASy Swiss-Prot
Match: RAB6A_MOUSE (Ras-related protein Rab-6A OS=Mus musculus GN=Rab6a PE=1 SV=4) HSP 1 Score: 142.895 bits (359), Expect = 2.356e-33 Identity = 73/175 (41.71%), Postives = 108/175 (61.71%), Query Frame = 1 Query: 232 NAGSSDAKNLR-VKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLP 753 +AG LR KLV LG+ VGK+ ++ RF+ FD T + T+G FLS+T+ L+D T V+ ++WDTAGQER+ +L P Y R YDIT+ +SF + W+ +++ D+++ LVGNK DL +KR+V ++G A++ + FIETSAK N+ QLF +A LP Sbjct: 2 SAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALP 175
BLAST of CK934466 vs. ExPASy Swiss-Prot
Match: RAB2B_HUMAN (Ras-related protein Rab-2B OS=Homo sapiens GN=RAB2B PE=1 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 2.356e-33 Identity = 64/163 (39.26%), Postives = 107/163 (65.64%), Query Frame = 1 Query: 268 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 756 K +++GD+GVGKSC++L+F +F P +T+G F ++ + + D +K +IWDTAGQE + ++ YYRG YDIT ++FN W+++ ++H S ++V+ L+GNK+DL +R+V ++G +A ++G+ F+ETSAKTA N+ + F AK + R Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNI-DGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYR 169
BLAST of CK934466 vs. ExPASy Swiss-Prot
Match: RAB25_BOVIN (Ras-related protein Rab-25 OS=Bos taurus GN=RAB25 PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 2.356e-33 Identity = 68/165 (41.21%), Postives = 102/165 (61.82%), Query Frame = 1 Query: 256 NLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 750 N K+VL+G+SGVGK+ ++ RF R +F S+ T+G F ++T+ L + +K +IWDTAG ERY A+ YYRG +D+T ++ + W+KEL H IV+ LVGNK+DL + REVP ++ +AE NG+ F+ETSA + N+ FE + K + Sbjct: 10 NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVML-GTAAIKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQSREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEI 173
BLAST of CK934466 vs. ExPASy Swiss-Prot
Match: YPTV4_VOLCA (GTP-binding protein yptV4 OS=Volvox carteri GN=YPTV4 PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 3.077e-33 Identity = 62/161 (38.51%), Postives = 106/161 (65.84%), Query Frame = 1 Query: 268 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 750 K +++GD+GVGKSC++L+F +F P +T+G F ++ I + D +K +IWDTAGQE + ++ YYRG YDIT ++FN W+++ ++H +P++ + L+GNK DL +R V ++G ++A+++G+ F+ETSA+TA N+ + F AK + Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINI-DGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEI 167
BLAST of CK934466 vs. ExPASy Swiss-Prot
Match: YPTC4_CHLRE (GTP-binding protein YPTC4 OS=Chlamydomonas reinhardtii GN=YPTC4 PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 3.077e-33 Identity = 62/161 (38.51%), Postives = 106/161 (65.84%), Query Frame = 1 Query: 268 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 750 K +++GD+GVGKSC++L+F +F P +T+G F ++ I + D +K +IWDTAGQE + ++ YYRG YDIT ++FN W+++ ++H +P++ + L+GNK DL +R V ++G ++A+++G+ F+ETSA+TA N+ + F AK + Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINI-DGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEI 167
BLAST of CK934466 vs. ExPASy Swiss-Prot
Match: RAB8B_DICDI (Ras-related protein Rab-8B OS=Dictyostelium discoideum GN=rab8B PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 3.077e-33 Identity = 69/169 (40.83%), Postives = 104/169 (61.54%), Query Frame = 1 Query: 250 AKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 756 A + VKL+L+GDSGVGKSC++LRF G F P+ T+G F +TI L+ +K +IWDTAGQER+ + YYRG YD+T SF + W++ +++H S + L+GNK D+ EK+ V + G A++ G+ F+ETSAK + N+ + F +AK + + Sbjct: 11 AYDFLVKLLLIGDSGVGKSCLLLRFSDGSFTPSFIATIGIDFKIRTIELEGKR-IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGSIRNWIRNIEQHASDSVNKMLIGNKCDMTEKKVVDSSRGKSLADEYGIKFLETSAKNSVNVEEAFIGLAKDIKK 178
BLAST of CK934466 vs. ExPASy Swiss-Prot
Match: RAB6A_PONAB (Ras-related protein Rab-6A OS=Pongo abelii GN=RAB6A PE=2 SV=3) HSP 1 Score: 142.51 bits (358), Expect = 3.077e-33 Identity = 69/164 (42.07%), Postives = 104/164 (63.41%), Query Frame = 1 Query: 262 RVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLP 753 + KLV LG+ VGK+ ++ RF+ FD T + T+G FLS+T+ L+D T V+ ++WDTAGQER+ +L P Y R YDIT+ +SF + W+ +++ D+++ LVGNK DL +KR+V ++G A++ + FIETSAK N+ QLF +A LP Sbjct: 13 KFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALP 175
BLAST of CK934466 vs. ExPASy Swiss-Prot
Match: RAB6A_HUMAN (Ras-related protein Rab-6A OS=Homo sapiens GN=RAB6A PE=1 SV=3) HSP 1 Score: 142.51 bits (358), Expect = 3.077e-33 Identity = 69/164 (42.07%), Postives = 104/164 (63.41%), Query Frame = 1 Query: 262 RVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLP 753 + KLV LG+ VGK+ ++ RF+ FD T + T+G FLS+T+ L+D T V+ ++WDTAGQER+ +L P Y R YDIT+ +SF + W+ +++ D+++ LVGNK DL +KR+V ++G A++ + FIETSAK N+ QLF +A LP Sbjct: 13 KFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALP 175
BLAST of CK934466 vs. ExPASy Swiss-Prot
Match: RAB6A_CHICK (Ras-related protein Rab-6A OS=Gallus gallus GN=RAB6A PE=2 SV=3) HSP 1 Score: 142.51 bits (358), Expect = 3.077e-33 Identity = 72/175 (41.14%), Postives = 108/175 (61.71%), Query Frame = 1 Query: 232 NAGSSDAKNLR-VKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLP 753 +AG LR KLV LG+ VGK+ ++ RF+ FD T + T+G FLS+T+ L+D T ++ ++WDTAGQER+ +L P Y R YDIT+ +SF + W+ +++ D+++ LVGNK DL +KR+V ++G A++ + FIETSAK N+ QLF +A LP Sbjct: 2 SAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRT-IRLQLWDTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALP 175
BLAST of CK934466 vs. ExPASy Swiss-Prot
Match: RAB25_MOUSE (Ras-related protein Rab-25 OS=Mus musculus GN=Rab25 PE=1 SV=2) HSP 1 Score: 142.51 bits (358), Expect = 3.077e-33 Identity = 68/165 (41.21%), Postives = 102/165 (61.82%), Query Frame = 1 Query: 256 NLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 750 N K+VL+G+SGVGK+ ++ RF R +F S+ T+G F ++T+ L + VK +IWDTAG ERY A+ YYRG +D+T ++ + W+KEL H IV+ LVGNK+DL + REVP ++ +AE NG+ F+ETSA + N+ F+ + K + Sbjct: 10 NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVML-GTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEACMFAENNGLLFLETSALDSTNVELAFQTVLKEI 173 The following BLAST results are available for this feature:
BLAST of CK934466 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK934466 ID=CK934466; Name=CK934466; organism=Citrus sinensis; type=EST; length=892bpback to top |