CK934511

Overview
NameCK934511
Unique NameCK934511
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length763
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10160 contig Csv1_Contig10160:66..828. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CK934511 vs. ExPASy Swiss-Prot
Match: E13L1_ARATH (Glucan endo-1,3-beta-glucosidase-like protein 1 OS=Arabidopsis thaliana GN=At3g58100 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 8.577e-15
Identity = 33/85 (38.82%), Postives = 51/85 (60.00%), Query Frame = 1 
Query:  145 WCVCKDGVGDPVLQKALDYACG-AGADCNPIHSNGPCYNPNTVKAHCSYAVNSYFQRKGQAQGSCDFSGSATVATTDPSTAGCSY 396
            WCV K+   D  LQ A+++ACG  GADC PI   GPC +P  V+   S+  N+Y+ + G+   +C+F+ +A + + +PS   C Y
Sbjct:   41 WCVAKNNAEDSSLQTAIEWACGQGGADCGPIQQGGPCNDPTDVQKMASFVFNNYYLKNGEEDEACNFNNNAALTSLNPSQGTCKY 125
[Close]
BLAST of CK934511 vs. ExPASy Swiss-Prot
Match: E1313_ARATH (Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana GN=At5g56590 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.706e-13
Identity = 33/89 (37.08%), Postives = 48/89 (53.93%), Query Frame = 1 
Query:  133 STANWCVCKDGVGDPVLQKALDYACGAG-ADCNPIHSNGPCYNPNTVKAHCSYAVNSYFQRKGQAQGSCDFSGSATVATTDPSTAGCSY 396
            S+ +WC+      +  L+ ALD+ACG G  DC  I  + PC+ P+T+ +H S+  NSYFQ+      +C F G+      DPS   C Y
Sbjct:  365 SSNSWCIASSKASERDLKGALDWACGPGNVDCTAIQPSQPCFQPDTLVSHASFVFNSYFQQNRATDVACSFGGAGVKVNKDPSYDKCIY 453
The following BLAST results are available for this feature:
BLAST of CK934511 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
E13L1_ARATH8.577e-1538.82Glucan endo-1,3-beta-glucosidase-like protein 1 OS... [more]
E1313_ARATH4.706e-1337.08Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004258_D01 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IF_D01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934511 ID=CK934511; Name=CK934511; organism=Citrus sinensis; type=EST; length=763bp
GGGGGTTGTGACAAACTTTTCTCGGAGCCAAACAAGCATTTGTTATCATT
ATCTCCTCTCTAAGTTTCTTTTGCTCATTCAGTTATGGCTGTTTTGGTGC
TTTTAGCTCTCTTCCTTGGCTTCACTGGGCATTCAACTGCAAACTGGTGT
GTTTGCAAAGATGGAGTGGGTGACCCAGTTTTACAAAAAGCTTTGGACTA
TGCTTGTGGAGCTGGGGCTGATTGTAACCCTATCCATTCCAATGGGCCTT
GTTACAACCCCAACACTGTCAAAGCTCACTGCAGTTATGCTGTCAACAGC
TATTTCCAGAGAAAGGGTCAAGCTCAAGGCTCTTGTGATTTTTCCGGAAG
TGCAACCGTTGCCACTACCGATCCCAGCACTGCTGGCTGTTCTTATCCTT
CAAGTGCCAGCACTTCAGGCACCACCACAACTTCCCCAACAACACCAGTC
ACAGGTACTCCAGGCACAACCACACCCACAACAACTCCGTCCACTACCAC
TCCAACGACTAACGCACCAGGCAGCACCACTCCGTACACCACCACACCAT
CAACTGGAACTGGAGTGTTGGGAGGAGTTGGTCCTGGTTTAGGCCCTTCG
GGATCTGGCATGCCCAACACAGACTATAGTCATGGTGGGATGAGACTGCA
AAACTCTGCCTTGTCTTTTTTGGTCGACCTCTTGTTCTCAGGCTCGATGC
TCTTGTGGGGTTGAAAGAAACAATCAACATGACATCTACTAGGATGGANN
NGNGGTACTATAG
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