CK934518

Overview
NameCK934518
Unique NameCK934518
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length591
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2157 contig Csv1_Contig2157:1..591. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CK934518 vs. ExPASy Swiss-Prot
Match: CYT7_ORYSJ (Putative cysteine proteinase inhibitor 7 OS=Oryza sativa subsp. japonica GN=Os03g0210100 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.740e-11
Identity = 44/119 (36.97%), Postives = 68/119 (57.14%), Query Frame = 1 
Query:   64 MNQRFCCLIVLFLSVVPLLAAGDRKGALVGGWKPIEDPKEKHVMEIGQFAVTEYNKQ-SKSALKFESVEKGETQAVSGTNYRLIL-VVKDGPSTKKFEAVVWEK-PWEHFKSLTSFKPM 411
            M  R   L++  ++VV ++A      A VG W+P+ D  + HV E+G++AV E ++  +   L FE V  GE Q V+G NYRL L     G    ++EAVV+E+ P  + + L SF+P+
Sbjct:    1 MTMRTSSLLLAAVAVVAIVAGAT--AATVGSWEPV-DINDPHVQELGRWAVAEEDRGVAAGGLTFERVTDGEKQVVAGVNYRLTLEASSSGAKDGRYEAVVYEQDPRSNARKLVSFEPI 116
The following BLAST results are available for this feature:
BLAST of CK934518 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
CYT7_ORYSJ2.740e-1136.97Putative cysteine proteinase inhibitor 7 OS=Oryza ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004258_B12 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IF_B12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934518 ID=CK934518; Name=CK934518; organism=Citrus sinensis; type=EST; length=591bp
GGGGATTCACTCAAGAACCGGAAGTCACGGACTTTGGTGTGAACGGTTAC
CAAAACAACGAAAATGAATCAACGTTTTTGCTGTCTTATTGTTCTCTTTC
TCTCCGTGGTCCCTCTCCTGGCCGCCGGCGACCGTAAAGGAGCGTTGGTT
GGGGGATGGAAGCCGATAGAGGACCCCAAGGAGAAGCACGTGATGGAGAT
CGGGCAGTTCGCGGTGACGGAGTACAACAAACAGTCAAAGAGCGCGTTGA
AGTTCGAGAGCGTGGAGAAGGGCGAGACTCAGGCGGTTTCCGGCACCAAT
TACCGGCTGATCTTGGTCGTCAAGGACGGACCTTCGACCAAGAAATTTGA
AGCTGTCGTTTGGGAGAAGCCATGGGAGCATTTCAAGAGTCTCACCTCGT
TTAAGCCTATGGTTAAATAGGGTGTTTAACAAATAACAATGCATGTAATC
TCAGATTGATAATTATTAGGGTTTTCGTTATGTGAGTGATGATATTATTA
TATTGTTTATGAATGTCAAAGGTGAGTCTTTCAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
back to top