CK934523
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: RH37_ARATH (DEAD-box ATP-dependent RNA helicase 37 OS=Arabidopsis thaliana GN=RH37 PE=2 SV=2) HSP 1 Score: 284.263 bits (726), Expect = 6.403e-76 Identity = 161/259 (62.16%), Postives = 176/259 (67.95%), Query Frame = 1 Query: 160 MSTSWADSVSASENAAPASFNTNSLP-RSTYVPPHLRNKQPASFEPPAPSREAHE-----PASGPRW-----------GGGPRPDFXXXXXXXXXXXXXXXXXXXXXXXXXX-VREVNPF-GDDIDAEQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEA 879 MS SWAD V+ SEN S N NS P R YVPPHLRN+ PA+ EP AP P SG RW GGG R D REVNPF DD + E F E +NT INFDAYEDIP+ETSG+NVPPPVNTFAEIDLGE LNLNIRRCKYVKPTPVQRHAIPI + GRDLMACAQTGSGKTAAFCFPIISGIM++Q+VQRPRG+RTVYPLA+IL+PTREL+SQIHDEA Sbjct: 1 MSASWAD-VADSENTGSGSSNQNSHPSRPAYVPPHLRNR-PAASEPVAPLPANDRVGYGGPPSGSRWAPGGSGVGVGGGGGYRADAGRPGSGSGYGGRGGGGWNNRSGGWDRREREVNPFENDDSEPEPAFTEQDNTVINFDAYEDIPIETSGDNVPPPVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPILLEGRDLMACAQTGSGKTAAFCFPIISGIMKDQHVQRPRGSRTVYPLAVILSPTRELASQIHDEA 257
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: RH11_ARATH (DEAD-box ATP-dependent RNA helicase 11 OS=Arabidopsis thaliana GN=RH11 PE=2 SV=1) HSP 1 Score: 263.848 bits (673), Expect = 8.956e-70 Identity = 148/258 (57.36%), Postives = 167/258 (64.73%), Query Frame = 1 Query: 160 MSTSWADSVSASENAAPASFNTNSLPRSTYVPPHLRNKQPASFEPPAPSRE----AHEPASGPRW-----------GGGPRPD---FXXXXXXXXXXXXXXXXXXXXXXXXXXVREVNPFGDDIDAEQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEA 879 MS SWAD V+ SE A S + YVPPHLRN+ P P + +PA G RW GGG R D REVNPFGDD + E F E ENTGINFDAYEDIPVETSG +VPPPVNTFA+IDLG+ LNLNIRRCKYV+PTPVQRHAIPI +A RDLMACAQTGSGKTAAFCFPIISGIM++Q+V+RPRG+R VYP A+IL+PTREL+ QIHDEA Sbjct: 1 MSASWAD-VADSEKAVSQS-------KPPYVPPHLRNRPSEPVAAPLPQNDHAGYGGQPA-GSRWAPPSSGGGGASGGGYRNDGGRTGYGYGAGGGGGGGGGWNNRSGGWDRREREVNPFGDDAELEPVFTEQENTGINFDAYEDIPVETSGGDVPPPVNTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIISGIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEA 249
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: RH52_ARATH (DEAD-box ATP-dependent RNA helicase 52 OS=Arabidopsis thaliana GN=RH52 PE=2 SV=1) HSP 1 Score: 258.455 bits (659), Expect = 3.763e-68 Identity = 143/243 (58.85%), Postives = 164/243 (67.49%), Query Frame = 1 Query: 163 STSWADSVSASENAAPASFNTNSLP-RSTYVPPHLRNKQPAS-FEPPAPSREAHEPASGPRWGGGPRPDFXXXXXXXXXXXXXXXXXXXXXXXXXXVR--EVNPFGDDIDAEQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEA 879 S SWAD VS SE A S P R+ YVPPHLR++ P+S F P+P G G G R R E NPFG+D +A+ E ENT INF+AYEDIP+ETSG+NVPPPVNTFAEIDLGE LNLNI+RCKYVKPTPVQR+AIPI AGRDLMACAQTGSGKTAAFCFPIISGIM++Q+++RPRG R VYPLA+IL+PTREL+ QIHDEA Sbjct: 3 SNSWAD-VSESERAPSGGGWGYSRPSRTNYVPPHLRSRTPSSEFVAPSPGNNDRGGYGGANSGYGGRGQGYGGRGSGYGGRGGPVGGWNARSGGWDRRDTETNPFGNDGNADPAVNEQENTVINFEAYEDIPIETSGDNVPPPVNTFAEIDLGEALNLNIQRCKYVKPTPVQRNAIPILAAGRDLMACAQTGSGKTAAFCFPIISGIMKDQHIERPRGVRGVYPLAVILSPTRELACQIHDEA 244
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: RH52B_ORYSJ (DEAD-box ATP-dependent RNA helicase 52B OS=Oryza sativa subsp. japonica GN=PL10B PE=2 SV=1) HSP 1 Score: 256.144 bits (653), Expect = 1.867e-67 Identity = 146/272 (53.68%), Postives = 169/272 (62.13%), Query Frame = 1 Query: 160 MSTSWADSVSASENAAPAS---FNTNSLPRSTYVPPHLRNKQPASFEPPAPSREAHEPAS---------------GPRWGG--------------GPRPDFXXXXXXXXXXXXXXXXXXXXXXXXXXVREVNPFGDDIDAEQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEA 879 M +SWADS + +E +APA+ + LPRS+YVPPHLR + P AP++ P++ GPRW G G R F RE +PF + AE F E ENTGINF+AYEDIPVETSG +VPPP NTFAEIDLG+ LN NIRRCKYVKPTPVQR+AIPIS+AGRDLMACAQTGSGKTAAFCFPIISGIMR + R RG+RT YPLALIL+PTRELS QIH+EA Sbjct: 1 MRSSWADSAANAEESAPAAAANHGNSRLPRSSYVPPHLRGQAA----PAAPAQAGALPSAAAAAQPSVGQPGVVGGPRWAGIVNGGGGGGGGSVGGSRQGFGAGGRGGGGGGGGGAWNSRPGGWDRRDREPDPFANSEAAEVDF-EGENTGINFEAYEDIPVETSGHDVPPPANTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLMACAQTGSGKTAAFCFPIISGIMRSRPPPRSRGSRTAYPLALILSPTRELSVQIHEEA 267
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: RH37_ORYSJ (DEAD-box ATP-dependent RNA helicase 37 OS=Oryza sativa subsp. japonica GN=PL10A PE=2 SV=1) HSP 1 Score: 253.447 bits (646), Expect = 1.210e-66 Identity = 149/276 (53.99%), Postives = 173/276 (62.68%), Query Frame = 1 Query: 160 MSTSWADSVSASENAAPASF--------NTNSLP-RSTYVPPHLRNKQPASFEPPAPSR--EAHEPAS------------GPRWGG-----------GPRPDFXXXXXXXXXXXXXXXXXXXXXXXXXXVREVNPFGDDI--DAEQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEA 879 M +SWADSV+ +E +APA+ + NS P RS YVPPHLR + P + PAP+ A +P++ G RW G GPR RE NPF + +A + + NTGINFDAYEDIPVETSG +VPPPVNTFAEIDLG+ LN NIRRCKYVKPTPVQR+AIPIS+AGRDLMACAQTGSGKTAAFCFPIISGIM + QRPRG+RT YPLALIL+PTRELS QIH+EA Sbjct: 1 MRSSWADSVANAEESAPATGAAPTPVANHQNSRPTRSAYVPPHLRGQAPTTTAAPAPAPGPAAVQPSASVQPSGYAAIVGGSRWAGPASGDGTGAVGGPRQSVGGRGGGGGGGGGWNSRPGWDRRD----REPNPFANSEAEEATEVDFDTANTGINFDAYEDIPVETSGHDVPPPVNTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLMACAQTGSGKTAAFCFPIISGIMSSRPPQRPRGSRTAYPLALILSPTRELSVQIHEEA 272
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: RH52C_ORYSJ (DEAD-box ATP-dependent RNA helicase 52C OS=Oryza sativa subsp. japonica GN=Os11g0599500 PE=3 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 1.809e-62 Identity = 144/254 (56.69%), Postives = 162/254 (63.78%), Query Frame = 1 Query: 166 TSWADSVSASENAAPA-SFNTNSLP-RSTYVPPHLRNKQPAS-----FEPPAPSREAHEPASGPRWGGGPRPDFXXXXXXXXXXXXXXXXXXXXXXXXXXVREVNPFGDDIDA-----EQP--FAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPR--GARTVYPLALILAPTRELSSQIHDEA 879 TSWAD A APA + N + P RS+YVPPHLRN+ +S PP+ S + P PRP RE NPFG+D DA ++P F +NTGINFDAYEDIPVETSG VPPPV TFAEIDLG+ LN NIRRCKYV+PTPVQR+AIPIS+AGRDLMACAQTGSGKTAAFCFPIISGIMR QRP+ G RT PLALIL+PTRELS QIH+EA Sbjct: 7 TSWADVADADPAPAPAPAANGPARPDRSSYVPPHLRNRGASSGGGAAAPPPSSSSSSAPPPRAAPGLLAPRPAAAGMGRMGGGGGGGGFGGPRRWD-----REPNPFGNDGDAAAGAGDEPEVFDAHQNTGINFDAYEDIPVETSGREVPPPVGTFAEIDLGQALNDNIRRCKYVRPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMRGPPAQRPQRGGMRTACPLALILSPTRELSMQIHEEA 255
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DDX3_DROME (ATP-dependent RNA helicase bel OS=Drosophila melanogaster GN=bel PE=1 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 7.162e-35 Identity = 73/129 (56.59%), Postives = 93/129 (72.09%), Query Frame = 1 Query: 508 NTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTV-----YPLALILAPTRELSSQIHDEA 879 NTGINFD YEDIPVE +G+NVPP + +F ++ L E + N+ +Y KPTPVQ+HAIPI + GRDLMACAQTGSGKTAAF PI++ + +V P+ R YPL L+LAPTREL++QI +EA Sbjct: 270 NTGINFDKYEDIPVEATGQNVPPNITSFDDVQLTEIIRNNVALARYDKPTPVQKHAIPIIINGRDLMACAQTGSGKTAAFLVPILNQMYELGHVPPPQSTRQYSRRKQYPLGLVLAPTRELATQIFEEA 398
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DED1_LODEL (ATP-dependent RNA helicase DED1 OS=Lodderomyces elongisporus GN=DED1 PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.764e-33 Identity = 101/277 (36.46%), Postives = 131/277 (47.29%), Query Frame = 1 Query: 178 DSVSASENAAPASFNTNSLP-----RSTYVPPHLRNKQPASFEPPAPSREAHEPASGPRW-----------------GGGPRPDFXXXXXXXXXXXXXXXXXXXXXXXXXXV-------REVNPFGDDIDAEQPFAEAENT-----GINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPR---------GARTVYPLALILAPTRELSSQIHDEA 879 +++S +N P + P R YVPPHLRN+ +S +P + P G R GGG P V E P D ++ E F AE+T GINFD Y+DIPVE SGE VP P+N+F L E L NI+ ++ KPTPVQ++++PI AGRDLMACAQTGSGKT F FP++S E Y+ P + VYP L++APTREL SQI+DE+ Sbjct: 9 NNLSVQDNNKPNGNGYSGQPQQQSGRRQYVPPHLRNR--SSHQPSSNGANGDIPFGGSRRSDYGGGRGGFGFGGGSNGGGSGPSGGYRNGGARGGSRGGFGGGRYQRPTPGVGRWVDGKHEPAPRNDRLELEL-FGVAEDTLFQSSGINFDNYDDIPVEASGEGVPEPINSFTAPPLDELLVENIKLSRFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLS----ESYMNGPAPIPESTGAFSSHKVYPTILVMAPTRELVSQIYDES 278
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DDX3_XENLA (Putative ATP-dependent RNA helicase an3 OS=Xenopus laevis GN=an3 PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.764e-33 Identity = 73/148 (49.32%), Postives = 96/148 (64.86%), Query Frame = 1 Query: 460 PFGDDIDAEQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGI--------MREQYVQRPRGARTVYPLALILAPTRELSSQIHDEA 879 P + EQ NTGINF+ Y+DIPVE +G N PP + +F ++ +GE + NI+ +Y +PTPVQ+HAIPI + RDLMACAQTGSGKTAAF PI+S I M+ G R +PL+L+LAPTREL+ QI++EA Sbjct: 180 PLAPNDRVEQELFSGSNTGINFEKYDDIPVEATGSNCPPHIESFHDVTMGEIIMGNIQLTRYTRPTPVQKHAIPIIIEKRDLMACAQTGSGKTAAFLLPILSQIYADGPGDAMKHLQENGRYGRRKQFPLSLVLAPTRELAVQIYEEA 327
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DDX3Y_PONAB (ATP-dependent RNA helicase DDX3Y OS=Pongo abelii GN=DDX3Y PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 2.304e-33 Identity = 73/140 (52.14%), Postives = 94/140 (67.14%), Query Frame = 1 Query: 484 EQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPR--------GARTVYPLALILAPTRELSSQIHDEA 879 EQ NTGINF+ Y+DIPVE +G N PP + F++ID+GE + NI +Y +PTPVQ+HAIPI RDLMACAQTGSGKTAAF PI+S I + + + G R YP++L+LAPTREL+ QI++EA Sbjct: 145 EQELFSGGNTGINFEKYDDIPVEATGSNCPPHIENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEA 284 The following BLAST results are available for this feature:
BLAST of CK934523 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 333
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934523 ID=CK934523; Name=CK934523; organism=Citrus sinensis; type=EST; length=879bpback to top |