CK934523
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DDX17_DROME (ATP-dependent RNA helicase p62 OS=Drosophila melanogaster GN=Rm62 PE=1 SV=3) HSP 1 Score: 79.337 bits (194), Expect = 3.128e-14 Identity = 50/140 (35.71%), Postives = 71/140 (50.71%), Query Frame = 1 Query: 460 PFGDDIDAEQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEA 879 PF + E P A + Y + T VP P+ F+E+ L + + IRR Y PT +Q PI+++G + + A+TGSGKT + P I I +Q +QR G P+AL+LAPTREL+ QI A Sbjct: 241 PFKKNFYQEHPNV-ANRSPYEVQRYREEQEITVRGQVPNPIQDFSEVHLPDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIVHINNQQPLQRGDG-----PIALVLAPTRELAQQIQQVA 374
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: RRP3_EMENI (ATP-dependent rRNA helicase rrp3 OS=Emericella nidulans GN=rrp3 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.086e-14 Identity = 47/124 (37.90%), Postives = 72/124 (58.06%), Query Frame = 1 Query: 496 AEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQI 867 +EAE+ A ++ +TSGE P P +F E+ + ++L Y PTP+Q AIP+++ GRD++ A+TGSGKTAAF P++ +M +T++ L+LAPTREL+ QI Sbjct: 20 SEAESVSSRGSAKDE--TQTSGEE-PAPAKSFKELGIIDQLCEACENMGYKAPTPIQSQAIPLALEGRDVIGLAETGSGKTAAFALPMLQALM--------EAPQTLF--GLVLAPTRELAYQI 130
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: RH30_ORYSJ (DEAD-box ATP-dependent RNA helicase 30 OS=Oryza sativa subsp. japonica GN=Os01g0911100 PE=2 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 4.086e-14 Identity = 50/146 (34.25%), Postives = 78/146 (53.42%), Query Frame = 1 Query: 448 REVNPFGDDIDAEQPFAEA--ENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEA 879 R + PF + E P +A + + DI VE G +VP PV F E + + I + +V+PTP+Q P+++ GRD++ AQTGSGKT ++ P + + + +++ G P+ LILAPTREL+ QI E+ Sbjct: 206 RSLIPFEKNFYVECPAVQAMSDMDVSQYRRQRDITVE--GHDVPKPVRYFQEANFPDYCMQAIAKSGFVEPTPIQSQGWPMALKGRDMIGIAQTGSGKTLSYLLPGLVHVGAQPRLEQGDG-----PIVLILAPTRELAVQIQQES 344
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: RH14_ARATH (DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis thaliana GN=RH14 PE=1 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 4.086e-14 Identity = 43/111 (38.74%), Postives = 65/111 (58.56%), Query Frame = 1 Query: 547 VETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEA 879 + SG VPPP+ +F EL + + PTP+Q + PI++ GRD++A A+TGSGKT + P G + ++QR R + P L+L+PTREL++QI +EA Sbjct: 146 ITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIP---GFL---HLQRIRNDSRMGPTILVLSPTRELATQIQEEA 250
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: PRP5_LODEL (Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Lodderomyces elongisporus GN=PRP5 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.086e-14 Identity = 42/111 (37.84%), Postives = 68/111 (61.26%), Query Frame = 1 Query: 547 VETSGENVPPPVNTFAEIDLGEELNLNIRR-CKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDE 876 V G+NVPPP T+ ++ + E + I+ + KP+P+Q AIPI ++GRD++ A+TGSGKT ++ P++ I + + + G P+ L+L+PTREL+ QI E Sbjct: 375 VRARGKNVPPPFLTWGQLLMPESVMSVIQNDLGFAKPSPIQCQAIPIVLSGRDMIGVAKTGSGKTLSYVLPMVRHIQDQLFPKPGEG-----PIGLVLSPTRELALQIEKE 480
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: PRP5_GIBZE (Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Gibberella zeae GN=PRP5 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.086e-14 Identity = 41/110 (37.27%), Postives = 65/110 (59.09%), Query Frame = 1 Query: 547 VETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDE 876 ++ +G++VP PV +A+ L + + Y KPTP+Q A+P ++GRD++ A+TGSGKT AF P+ I + ++ G P+ LI+ PTREL+ QIH + Sbjct: 585 IKVNGKDVPKPVQKWAQCGLTRQTLDVVDNLGYEKPTPIQMQALPALMSGRDVIGVAKTGSGKTVAFLLPMFRHIKDQPPLKDTDG-----PIGLIMTPTRELAVQIHKD 689
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: PRP28_BOTFB (Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Botryotinia fuckeliana (strain B05.10) GN=prp28 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.086e-14 Identity = 47/115 (40.87%), Postives = 66/115 (57.39%), Query Frame = 1 Query: 535 EDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEA 879 ED + T G +P P+ ++E L + L I + Y +P+ VQR AIPI++ RDL+ A TGSGKTAAF P++ + + + P A+ILAPTREL+ QI EA Sbjct: 364 EDFNISTKGGAIPNPMRNWSESKLPKRLLDVIHQVGYDEPSAVQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLL--VYISELPPLNEFTKNDGPYAIILAPTRELAQQIEVEA 476
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DBP9_SCHPO (ATP-dependent RNA helicase dbp9 OS=Schizosaccharomyces pombe GN=dbp9 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.086e-14 Identity = 39/97 (40.21%), Postives = 65/97 (67.01%), Query Frame = 1 Query: 586 TFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYV-QRPRGARTVYPLALILAPTRELSSQIHD 873 TF++ +L L I +C++ KPT VQ IP+++ G+DL+A A+TGSGKTAA+ PI+ +++++ + + RG AL+L PTREL+ Q+++ Sbjct: 15 TFSDFNLDPRLQRAIHKCEFEKPTSVQSETIPLALEGKDLVAQARTGSGKTAAYLIPILELLLKQKQIDENQRGI-----FALLLVPTRELAQQVYN 106
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: ROK1_PICST (ATP-dependent RNA helicase ROK1 OS=Pichia stipitis GN=ROK1 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.336e-14 Identity = 46/138 (33.33%), Postives = 77/138 (55.80%), Query Frame = 1 Query: 478 DAEQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEI----DLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPL-ALILAPTRELSSQIHDE 876 D E P E + + + + +GE++P P+ +F ++ L +L N+ ++V+PT +Q ++PIS++GRDL+ACA TGSGKT AF P+I ++ +G Y + L+++PT EL+ QI E Sbjct: 81 DEEAPPLEIQTVEDSIKLRKANHSKVTGEDIPLPIGSFQDMIGRFRLDSKLLSNLLEAEFVEPTAIQCESLPISLSGRDLIACAPTGSGKTLAFLIPLIQSLLVSS-----KGRPKNYGITGLVISPTNELAIQIFQE 213
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: ROK1_LODEL (ATP-dependent RNA helicase ROK1 OS=Lodderomyces elongisporus GN=ROK1 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.336e-14 Identity = 42/113 (37.17%), Postives = 71/113 (62.83%), Query Frame = 1 Query: 550 ETSGENVPPPVNTFAEI----DLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDE 876 + +G+++P P+ +F ++ + + + N+ ++V+PTP+Q AIPI++A RDL+ACA TGSGKT AF P++ ++ Q V + G R LI++PT EL+ QI + Sbjct: 105 KVTGDDIPIPIGSFQDMIGRFKIDKRVLSNLLDAEFVEPTPIQCEAIPITLANRDLIACAPTGSGKTLAFLIPLLQQLV-SQNVLKNHGIR-----GLIISPTNELAVQIFQQ 211 The following BLAST results are available for this feature:
BLAST of CK934523 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 333
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK934523 ID=CK934523; Name=CK934523; organism=Citrus sinensis; type=EST; length=879bpback to top |