CK934523
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DBP10_CANAL (ATP-dependent RNA helicase DBP10 OS=Candida albicans GN=DBP10 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.113e-11 Identity = 40/97 (41.24%), Postives = 59/97 (60.82%), Query Frame = 1 Query: 586 TFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDE 876 +FA L + + NI + Y +PTP+QR IP+ + GRD++ A+TGSGKTAAF P+I + Q P G R A+IL+P+REL+ Q + + Sbjct: 100 SFASFGLTKFILANIAKKGYKQPTPIQRKTIPLIMEGRDVVGMARTGSGKTAAFVLPLIERLKSRQ----PGGVR-----AVILSPSRELALQTYKQ 187
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: PRP5_YARLI (Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Yarrowia lipolytica GN=PRP5 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.453e-11 Identity = 43/134 (32.09%), Postives = 72/134 (53.73%), Query Frame = 1 Query: 481 AEQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMR----EQYVQRPRGARTVYPLALILAPTRELSSQIH 870 A+ AE ++ D ++ G++ P P++ + ++ L + +Y KPT +Q AIP ++GRD+++ A+TGSGKT AF P++ I E + GA + +PL +I+ PTREL QI+ Sbjct: 349 ADMTEAETNELRLSLDG-----IKIRGKDCPKPISKWTQLGLPGPTMGVLNDLRYDKPTSIQAQAIPAVMSGRDVISVAKTGSGKTLAFLLPMLRHIKHRVGVETHTTTLSGASS-HPLGVIITPTRELCVQIY 476
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DRS1_ASPTN (ATP-dependent RNA helicase drs1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=drs1 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.453e-11 Identity = 49/138 (35.51%), Postives = 71/138 (51.45%), Query Frame = 1 Query: 469 DDIDAEQPF-AEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEA 879 +D DAE AE + F A E+ E + E +F E +L + + + PTP+QR IP+++ G+D++ A TGSGKTAAF PI+ E+ + RPR T IL PTREL+ Q ++ A Sbjct: 268 NDSDAESEIDAEEQEKRKAFFAPEE---EKTKEQADGAQRSFQEFNLSRPILRGLAAVNFTNPTPIQRKTIPVALLGKDIVGSAVTGSGKTAAFVVPIL-----ERLLFRPRKVPT--SRVAILMPTRELAVQCYNVA 395
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DDX41_HUMAN (Probable ATP-dependent RNA helicase DDX41 OS=Homo sapiens GN=DDX41 PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.453e-11 Identity = 35/104 (33.65%), Postives = 59/104 (56.73%), Query Frame = 1 Query: 559 GENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIH 870 G+ +PPP+ +F E+ + +++ PTP+Q IP ++GRD++ A TGSGKT F P+I + ++ +R ++ P LI+ P+REL+ Q H Sbjct: 173 GDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE--KRLPFSKREGPYGLIICPSRELARQTH 274
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DDX17_TRYBB (Putative DEAD-box RNA helicase HEL64 OS=Trypanosoma brucei brucei GN=HEL64 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.453e-11 Identity = 39/116 (33.62%), Postives = 67/116 (57.76%), Query Frame = 1 Query: 535 EDIPVETSGENVPPPVNTFAEID--LGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDE 876 E+ + G++ PPP+++F + + L + + PTPVQ + P+ ++GRDL+ A+TGSGKT F P ++ I ++ ++ G P+ ++LAPTREL+ QI +E Sbjct: 84 EEHVITIFGDDCPPPMSSFDHLCGIVPPYLLKKLTAQNFTAPTPVQAQSWPVLLSGRDLVGVAKTGSGKTLGFMVPALAHIAVQEPLRSGDG-----PMVVVLAPTRELAQQIEEE 194
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DBP4_MAGGR (ATP-dependent RNA helicase DBP4 OS=Magnaporthe grisea GN=DBP4 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.453e-11 Identity = 37/92 (40.22%), Postives = 55/92 (59.78%), Query Frame = 1 Query: 589 FAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQ 864 FAE+ L E +R + T +Q AIP+++ GRD++ A+TGSGKT AF P++ + REQ+ Q + AL+L+PTREL+ Q Sbjct: 51 FAELPLSEPTAKGVRDSHFETLTDIQARAIPLALKGRDILGAAKTGSGKTLAFLVPLLEKLYREQWTQEAKLG------ALVLSPTRELAVQ 136
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DBP4_DEBHA (ATP-dependent RNA helicase DBP4 OS=Debaryomyces hansenii GN=DBP4 PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.453e-11 Identity = 40/116 (34.48%), Postives = 64/116 (55.17%), Query Frame = 1 Query: 526 DAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHD 873 DAY+ + E S ++ F+++ + EE ++ + T +Q+ IPIS+ G D+M A+TGSGKT AF P I ++R + + A ALI++PTREL+ QI + Sbjct: 34 DAYDPVVDEKS-------ISQFSDLPISEETARGLKEASFASLTDIQKKTIPISLKGEDVMGTAKTGSGKTLAFLIPTIESLIRNKITEYDGLA------ALIISPTRELAVQIFE 136
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DBP3_CANGA (ATP-dependent RNA helicase DBP3 OS=Candida glabrata GN=DBP3 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.453e-11 Identity = 43/136 (31.62%), Postives = 76/136 (55.88%), Query Frame = 1 Query: 466 GDDIDAEQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHD 873 G ++ E+ + ++ F ++ VE + P+ F +I L +E+ I K+ KPTP+Q + P ++G+D++ A+TGSGKT AF P I+ ++ +P+G + L+++PTREL+SQI+D Sbjct: 91 GAYVENEELSKQPQSVIDEFFKENEVSVEDPSKLNLRPLLAFNQISLDKEVQNEI--AKFPKPTPIQAVSWPYLLSGKDVIGVAETGSGKTFAFGVPAINNLLTSS--SKPKGIK-----VLVISPTRELASQIYD 217
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DBP2_VANPO (ATP-dependent RNA helicase DBP2 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=DBP2 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.453e-11 Identity = 37/107 (34.58%), Postives = 61/107 (57.01%), Query Frame = 1 Query: 556 SGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDE 876 +G ++P P+ +F E + + ++ + KPT +Q P++++GRD++ A TGSGKT ++C P I I + + G P+ L+LAPTREL+ QI E Sbjct: 104 TGHDIPKPITSFDEAGFPDYVLEEVKAEGFEKPTGIQCQGWPMALSGRDMIGVAATGSGKTLSYCLPGIVHINAQPLLSPGDG-----PIVLVLAPTRELAVQIQKE 205
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: ROK1_SCHPO (ATP-dependent RNA helicase rok1 OS=Schizosaccharomyces pombe GN=rok1 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.898e-11 Identity = 47/111 (42.34%), Postives = 62/111 (55.86%), Query Frame = 1 Query: 550 ETSGENVPPPVNTFAEIDLGEELNL-NIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEA 879 + +G N P+ F E L E L NI C T +QR+AIP + RDL+ACA TGSGKT A+ FPI+ + + P G R A+I+APTREL QI+ +A Sbjct: 39 KVTGNNPVDPIEEFPEGILCENLKKQNITEC-----TTIQRYAIPTIGSKRDLLACAPTGSGKTIAYLFPILQKLQ----LHVPGGYR-----AIIVAPTRELCEQIYRQA 135 The following BLAST results are available for this feature:
BLAST of CK934523 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 333
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934523 ID=CK934523; Name=CK934523; organism=Citrus sinensis; type=EST; length=879bpback to top |