CK934523
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: RRP3_AJECN (ATP-dependent rRNA helicase RRP3 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=RRP3 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.228e-11 Identity = 36/77 (46.75%), Postives = 49/77 (63.64%), Query Frame = 1 Query: 643 YVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHD 873 Y PTP+Q +IP+++ GRDL+ A+TGSGKTAAF PI+ +M +P+ LILAPTREL+ QI + Sbjct: 79 YKSPTPIQAESIPLALQGRDLIGLAETGSGKTAAFALPILQALM-----NKPQSL-----FGLILAPTRELACQISE 145
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: MAK5_CANAL (ATP-dependent RNA helicase MAK5 OS=Candida albicans GN=MAK5 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.228e-11 Identity = 46/141 (32.62%), Postives = 78/141 (55.32%), Query Frame = 1 Query: 478 DAEQPFAEA--ENTGINFDAYEDIPVETSGE-NVPPPVNTFAEIDLGEELNL----NIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYV--QRPRGARTVYPLALILAPTRELSSQIHD 873 D + AE+ E ++F A D+P+ E N+P + E DLG ++ + + + KPTP+Q+ IPI+++G+D++ A TGSGKT A+ PI+ ++ + Q + + +P +I APTREL+ Q+ D Sbjct: 160 DKDDKLAESNDELNAVSF-ANLDLPLPDDNEINLP----NWQEGDLGSSISAYTLYGLSQLDFKKPTPIQKETIPIALSGKDVIGKATTGSGKTLAYGIPILEKYIQSLNLIKQNNKDKKINHPTGIIFAPTRELAHQVVD 295
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DRS1_YARLI (ATP-dependent RNA helicase DRS1 OS=Yarrowia lipolytica GN=DRS1 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.228e-11 Identity = 37/110 (33.64%), Postives = 58/110 (52.73%), Query Frame = 1 Query: 544 PVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHD 873 P E + + TF ++L + I Y PTP+Q IPI++ G+DL+A A TGSGKTAA+ P++ ++ + ++ ++L PTRELS Q+ D Sbjct: 239 PEEENNDKTESVHKTFQTLNLSRPVMKGISALGYQAPTPIQSRTIPIALMGKDLVAGAVTGSGKTAAYIIPVLERLLY-------KSSKVAATKVVVLTPTRELSIQVAD 341
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DRS1_CHAGB (ATP-dependent RNA helicase DRS1 OS=Chaetomium globosum GN=DRS1 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.228e-11 Identity = 46/134 (34.33%), Postives = 68/134 (50.75%), Query Frame = 1 Query: 478 DAEQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEA 879 D ++ AE E F A P ET +++F + L + + + KPTP+Q IPI++ G+D++ A TGSGKTAAF PI+ E+ + RP+ T ++L PTREL+ Q H A Sbjct: 244 DDDEEDAEEEARRKEFFA---APEETENVGKKGGLSSFQGMSLSRPILRGLTSVGFTKPTPIQAKTIPIALMGKDVVGGAVTGSGKTAAFVVPIL-----ERLLYRPKKVPTT--RVVVLTPTRELAIQCHSVA 367
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DRS1_ASPNC (ATP-dependent RNA helicase drs1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=drs1 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.228e-11 Identity = 48/137 (35.04%), Postives = 70/137 (51.09%), Query Frame = 1 Query: 469 DDIDAEQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEA 879 D + Q AE E F A E+ +TS + +F E +L + + + PTP+QR IP+++ G+D++ A TGSGKTAAF PI+ E+ + RPR T IL PTREL+ Q ++ A Sbjct: 273 DSDEESQVDAEEEEKRKAFFAPEE--EKTSESAMADAKRSFQEFNLSRPILRGLAGVNFSNPTPIQRKTIPVALLGKDIVGSAVTGSGKTAAFVVPIL-----ERLLFRPRKVPT--SRVAILMPTRELAVQCYNVA 400
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DRS1_ASHGO (ATP-dependent RNA helicase DRS1 OS=Ashbya gossypii GN=DRS1 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.228e-11 Identity = 50/138 (36.23%), Postives = 70/138 (50.72%), Query Frame = 1 Query: 463 FGDDIDAEQPFAEAENTGINFDAYEDIPVETSGENVPPPVN-TFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHD 873 FGD EQ A E+T + GE V+ TF + L + + Y KP+P+Q IPI++ G+D++A A TGSGKTAAF PII E+ + +P A+ L+L PTREL+ Q+ D Sbjct: 184 FGD----EQEEAREEDTAEEMAQF--YAPSNEGEEAKNVVHSTFNSLSLSRPVLKGLAALGYTKPSPIQGATIPIALLGKDVIAGAVTGSGKTAAFMIPII-----ERLLYKP--AKIASTRVLVLTPTRELAIQVAD 308
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DBP3_YEAS7 (ATP-dependent RNA helicase DBP3 OS=Saccharomyces cerevisiae (strain YJM789) GN=DBP3 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.228e-11 Identity = 40/99 (40.40%), Postives = 61/99 (61.62%), Query Frame = 1 Query: 577 PVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHD 873 P+ +F + L + I K+ KPTP+Q A P ++G+D++ A+TGSGKT AF P IS +M + Q+ RG + L+++PTREL+SQI+D Sbjct: 112 PLLSFDYLSLDSSIQAEIS--KFPKPTPIQAVAWPYLLSGKDVVGVAETGSGKTFAFGVPAISHLMND---QKKRGIQ-----VLVISPTRELASQIYD 200
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DBP10_CANGA (ATP-dependent RNA helicase DBP10 OS=Candida glabrata GN=DBP10 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.228e-11 Identity = 43/131 (32.82%), Postives = 70/131 (53.44%), Query Frame = 1 Query: 478 DAEQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIH 870 D E + +N + +AY + + ++ +FA L + + +NI + + +PTP+QR IP+ + RD++ A+TGSGKTAAF P+I + GAR A+IL+P+REL+ Q H Sbjct: 83 DDEDEKKKVDNDDDDVNAYFSVNTDAKSKHKK---GSFASFGLSKLILVNISKRGFRQPTPIQRKTIPLILQNRDIVGMARTGSGKTAAFVLPMIEKLKTH---SSKIGAR-----AIILSPSRELAMQTH 202
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: SRMB_ECOLI (ATP-dependent RNA helicase srmB OS=Escherichia coli (strain K12) GN=srmB PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.522e-11 Identity = 38/100 (38.00%), Postives = 60/100 (60.00%), Query Frame = 1 Query: 580 VNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEA 879 V TF+E++L E L ++ + +PT +Q AIP ++ GRD++ A TG+GKTAA+ P + ++ + ++ G P LIL PTREL+ Q+ D A Sbjct: 3 VTTFSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLLPALQHLL--DFPRKKSGP----PRILILTPTRELAMQVSDHA 96
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: RRP3_BOTFB (ATP-dependent rRNA helicase rrp3 OS=Botryotinia fuckeliana (strain B05.10) GN=rrp3 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.522e-11 Identity = 37/79 (46.84%), Postives = 52/79 (65.82%), Query Frame = 1 Query: 643 YVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPL-ALILAPTRELSSQIHDE 876 Y PTP+QR +IP+++ GRDL+ A+TGSGKTAAF PI+ ++ +P+ PL L+LAPTREL+ QI + Sbjct: 80 YKAPTPIQRESIPLALQGRDLIGLAETGSGKTAAFALPILQALL-----DKPQ------PLFGLVLAPTRELAYQISQQ 147 The following BLAST results are available for this feature:
BLAST of CK934523 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 333
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934523 ID=CK934523; Name=CK934523; organism=Citrus sinensis; type=EST; length=879bpback to top |