CK934523
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DBP2_PICGU (ATP-dependent RNA helicase DBP2 OS=Pichia guilliermondii GN=DBP2 PE=3 SV=3) HSP 1 Score: 71.633 bits (174), Expect = 6.523e-12 Identity = 37/106 (34.91%), Postives = 61/106 (57.55%), Query Frame = 1 Query: 559 GENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDE 876 G ++P P+ +F E + + +++ + KPT +Q P++++GRD++ A TGSGKT ++C P I I + + G P+ L+LAPTREL+ QI E Sbjct: 117 GTDIPKPITSFDEAGFPDYVLNEVKQQGFPKPTAIQCQGWPMALSGRDMIGIAATGSGKTLSYCLPSIVHINAQPLLGPGDG-----PIVLVLAPTRELAVQIQQE 217
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: RRP3_ASPOR (ATP-dependent rRNA helicase rrp3 OS=Aspergillus oryzae GN=rrp3 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.519e-12 Identity = 50/140 (35.71%), Postives = 69/140 (49.29%), Query Frame = 1 Query: 448 REVNPFGDDIDAEQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQI 867 RE D D+E + +E+ N E P E + +F E+ L E+L Y PT +Q AIP+++ GRDL+ A+TGSGKTAAF PI+ +M +P L+LAPTREL+ QI Sbjct: 11 REAPQQEDHSDSEAHSSASEDAAPNTTEQEQEPSEAPKQ----APKSFKELGLIEQLCEACDSMGYKAPTAIQAEAIPLALQGRDLIGLAETGSGKTAAFALPILQALM-----DKPSSF-----FGLVLAPTRELAYQI 136
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DRS1_VANPO (ATP-dependent RNA helicase DRS1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=DRS1 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.519e-12 Identity = 48/134 (35.82%), Postives = 66/134 (49.25%), Query Frame = 1 Query: 472 DIDAEQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHD 873 D D E E E A P S E +TF + L + + Y KP+P+Q IPI ++G+D++A A TGSGKTAAF PII E+ + +P A+ ++L PTREL+ QI D Sbjct: 194 DDDKEDDDEEREEDTAEEMASFYAPESESSEATSTVHSTFNSLTLSRPVLKGLSDLGYTKPSPIQSATIPIGLSGKDIIAGAVTGSGKTAAFMIPII-----ERLLYKP--AKVASTRVIVLTPTRELAIQIAD 320
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DRS1_CANAL (ATP-dependent RNA helicase DRS1 OS=Candida albicans GN=DRS1 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.519e-12 Identity = 41/105 (39.05%), Postives = 63/105 (60.00%), Query Frame = 1 Query: 562 ENVPPPVNT-FAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHD 873 E+ P +T F + L + I K+ KPTP+Q +IPI++ G+D++A AQTGSGKT A+ PII E+ + +P + V +IL PTREL+ Q+++ Sbjct: 122 ESSPQQTHTSFQTLQLSRPVLKGIAELKFTKPTPIQSASIPIALLGKDIVAGAQTGSGKTGAYMIPII-----ERLLYKPSTSTKV----IILTPTRELALQVYE 217
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DRS1_ASPOR (ATP-dependent RNA helicase drs1 OS=Aspergillus oryzae GN=drs1 PE=3 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 8.519e-12 Identity = 50/138 (36.23%), Postives = 72/138 (52.17%), Query Frame = 1 Query: 466 GDDIDAEQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEA 879 G DI++E AE E F A E+ E S + +F E +L + + + PTP+QR IP+++ G+D++ A TGSGKTAAF PI+ E+ + RPR T IL PTREL+ Q ++ A Sbjct: 266 GSDIESEVD-AEEEAKRKAFFAPEEQTSEQSAAELSK--KSFQEFNLSRPILRGLAAVNFTNPTPIQRKTIPVALLGKDIVGSAVTGSGKTAAFVVPIL-----ERLLFRPRKVPT--SRVAILMPTRELAVQCYNVA 393
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DDX52_DICDI (Probable ATP-dependent RNA helicase ddx52 OS=Dictyostelium discoideum GN=ddx52 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.519e-12 Identity = 40/112 (35.71%), Postives = 66/112 (58.93%), Query Frame = 1 Query: 547 VETSGENVPPPVNTFAEID----LGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIH 870 ++ G ++P P+ F++++ + + L NI Y +P+P+Q IPI + R+++A A TGSGKTA+F PI+ + Y + G R+V I+APTREL+ QI+ Sbjct: 183 IKVDGTDIPDPMTEFSQLENRFKVRKYLLNNINEIGYKEPSPIQMQVIPILLKEREVVAIAPTGSGKTASFSIPILQAL----YEPKKEGFRSV-----IIAPTRELAQQIY 285
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DDX41_DROME (ATP-dependent RNA helicase abstrakt OS=Drosophila melanogaster GN=abs PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.519e-12 Identity = 42/116 (36.21%), Postives = 64/116 (55.17%), Query Frame = 1 Query: 538 DIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVK-PTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQY---VQRPRGARTVYPLALILAPTRELSSQIHD 873 ++ + GE PP+ +F E+ + + LN K +K PTP+Q +P +AGRDL+ A TGSGKT F P+I + ++Y +R G P LI+ P+REL+ Q H+ Sbjct: 162 ELRILVEGETPSPPIRSFREMKFPKGI-LNGLAAKGIKNPTPIQVQGLPTVLAGRDLIGIAFTGSGKTLVFVLPVIMFALEQEYSLPFERNEG-----PYGLIICPSRELAKQTHE 271
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: PRP5_DEBHA (Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Debaryomyces hansenii GN=PRP5 PE=3 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 1.113e-11 Identity = 46/149 (30.87%), Postives = 74/149 (49.66%), Query Frame = 1 Query: 451 EVNPFGDDIDAEQ------PFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIR-RCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDE 876 + +PF D E P E N + D ++ G N P+ ++++ L + I R Y P+ +Q AIP ++GRD++ A+TGSGKT +F P++ I + +++ G P+ LI+ PTREL+ QIH E Sbjct: 271 QYHPFRKDFYTEPTEISKLPEEEVANLRLKLDG-----IKVRGVNCTRPIIRWSQLGLPSTIMSIIEGRLNYSSPSSIQAQAIPAIMSGRDIIGVAKTGSGKTLSFVLPLLRHIQDQPPLKKGDG-----PIGLIMTPTRELALQIHKE 409
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DRS1_YEAST (ATP-dependent RNA helicase DRS1 OS=Saccharomyces cerevisiae GN=DRS1 PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 1.113e-11 Identity = 49/136 (36.03%), Postives = 71/136 (52.21%), Query Frame = 1 Query: 469 DDIDAEQPFAEAENTGINFDAYEDIPVETSGENVPPPV-NTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHD 873 D+ID E EA+ D Y ET G+ + F + L + + YVKP+P+Q IPI++ G+D++A A TGSGKTAAF PII E+ + +P A+ ++L PTREL+ Q+ D Sbjct: 200 DEIDEEDDSEEAKA-----DFYAP---ETEGDEAKKQMYENFNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAFMIPII-----ERLLYKP--AKIASTRVIVLLPTRELAIQVAD 320
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DRS1_YEAS7 (ATP-dependent RNA helicase DRS1 OS=Saccharomyces cerevisiae (strain YJM789) GN=DRS1 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.113e-11 Identity = 49/136 (36.03%), Postives = 71/136 (52.21%), Query Frame = 1 Query: 469 DDIDAEQPFAEAENTGINFDAYEDIPVETSGENVPPPV-NTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHD 873 D+ID E EA+ D Y ET G+ + F + L + + YVKP+P+Q IPI++ G+D++A A TGSGKTAAF PII E+ + +P A+ ++L PTREL+ Q+ D Sbjct: 202 DEIDEEDDSEEAKA-----DFYAP---ETEGDEAKKQMYENFNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAFMIPII-----ERLLYKP--AKIASTRVIVLLPTRELAIQVAD 322 The following BLAST results are available for this feature:
BLAST of CK934523 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 333
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934523 ID=CK934523; Name=CK934523; organism=Citrus sinensis; type=EST; length=879bpback to top |