CK934523
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DRS1_NEUCR (ATP-dependent RNA helicase drs-1 OS=Neurospora crassa GN=drs-1 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.898e-11 Identity = 41/109 (37.61%), Postives = 60/109 (55.05%), Query Frame = 1 Query: 544 PVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIH 870 P E + +++F E+ L + + + KPTP+Q IPIS+ G+D++ A TGSGKTAAF PI+ E+ + RP+ T +IL PTREL+ Q H Sbjct: 280 PEEENQPKKKGEMSSFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISLMGKDVVGGAVTGSGKTAAFVVPIL-----ERLLYRPKKVPTT--RVVILTPTRELAIQCH 381
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DBP9_ASPTN (ATP-dependent RNA helicase dbp9 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=dbp9 PE=3 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.898e-11 Identity = 43/115 (37.39%), Postives = 69/115 (60.00%), Query Frame = 1 Query: 538 DIPV-ETSGENVPPPVNT--FAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHD 873 D+P E + ++V V+ F ++L L + + K+ KPT VQ AIP+++ G+D++A A+TGSGKTAA+ PI+ I++++ A T LIL PTREL+ Q+ + Sbjct: 9 DVPSPEAADDSVKNDVDNLDFESLNLDPRLRQALVKEKFTKPTLVQAKAIPLALEGKDILARAKTGSGKTAAYVLPILQTILQKKANDPSLKATT----GLILVPTRELAEQVQN 119
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DBP9_ASPOR (ATP-dependent RNA helicase dbp9 OS=Aspergillus oryzae GN=dbp9 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.898e-11 Identity = 38/95 (40.00%), Postives = 59/95 (62.11%), Query Frame = 1 Query: 589 FAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHD 873 F ++L L + + K+ KPT VQ AIP+++ G+D++A A+TGSGKTAA+ PI+ I++++ A T LIL PTREL+ Q+ + Sbjct: 29 FESLNLDPRLRQALIKEKFTKPTLVQAKAIPLALEGKDILARAKTGSGKTAAYVLPILQTILQKKATDPSFKATT----GLILVPTRELAEQVQN 119
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: ROK1_YEAST (ATP-dependent RNA helicase ROK1 OS=Saccharomyces cerevisiae GN=ROK1 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.479e-11 Identity = 37/111 (33.33%), Postives = 64/111 (57.66%), Query Frame = 1 Query: 556 SGENVPPPVNTFAEI----DLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDE 876 SG ++P P+ +F ++ + L N+ + +PTP+Q IP+++ RD++AC TGSGKT AF P++ I+ ++ +G LI++PT+EL++QI E Sbjct: 109 SGIDIPLPIGSFEDLISRFSFDKRLLNNLIENGFTEPTPIQCECIPVALNNRDVLACGPTGSGKTLAFLIPLVQQIIDDKQTAGLKG--------LIISPTKELANQIFIE 211
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: RH29_ORYSJ (DEAD-box ATP-dependent RNA helicase 29 OS=Oryza sativa subsp. japonica GN=Os08g0416100 PE=2 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 2.479e-11 Identity = 41/92 (44.57%), Postives = 56/92 (60.87%), Query Frame = 1 Query: 589 FAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQ 864 F + L EE+ +R Y PTP+QR A+P+ +AG D+ A A+TGSGKTAAF P+I + R G R ALIL+PTR+L++Q Sbjct: 51 FESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAGHDIAAMARTGSGKTAAFLVPMIQRLRRH---DAGAGIR-----ALILSPTRDLATQ 134
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: RH29_ORYSI (DEAD-box ATP-dependent RNA helicase 29 OS=Oryza sativa subsp. indica GN=OsI_028228 PE=2 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 2.479e-11 Identity = 41/92 (44.57%), Postives = 56/92 (60.87%), Query Frame = 1 Query: 589 FAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQ 864 F + L EE+ +R Y PTP+QR A+P+ +AG D+ A A+TGSGKTAAF P+I + R G R ALIL+PTR+L++Q Sbjct: 51 FESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAGHDIAAMARTGSGKTAAFLVPMIQRLRRH---DAGAGIR-----ALILSPTRDLATQ 134
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DBP3_NEUCR (ATP-dependent RNA helicase dbp-3 OS=Neurospora crassa GN=dbp-3 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.479e-11 Identity = 38/107 (35.51%), Postives = 61/107 (57.01%), Query Frame = 1 Query: 550 ETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIH 870 + S N+ P +N F+++ ++ N Y PTP+Q + P S++GRD++ A+TGSGKT AF P + + + RT +P A+I++PTREL+ Q H Sbjct: 170 DPSSSNLRPIMN-FSQLPQSNLISKN-PFAAYTNPTPIQSASWPFSLSGRDVIGIAETGSGKTMAFSLPCVESLASRPKPKFNSRDRTAHPRAVIVSPTRELAMQTH 274
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DBP3_CHAGB (ATP-dependent RNA helicase DBP3 OS=Chaetomium globosum GN=DBP3 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.479e-11 Identity = 31/76 (40.79%), Postives = 47/76 (61.84%), Query Frame = 1 Query: 643 YVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIH 870 + PTP+Q + P +++GRD++ A+TGSGKT AF P I + +G RT Y A++++PTREL+ Q H Sbjct: 201 FTAPTPIQAASWPFALSGRDVIGIAETGSGKTMAFAVPCIESLASSPKPNHAKGDRTAYARAVVVSPTRELAMQTH 276
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DBP10_LODEL (ATP-dependent RNA helicase DBP10 OS=Lodderomyces elongisporus GN=DBP10 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.479e-11 Identity = 45/137 (32.85%), Postives = 69/137 (50.36%), Query Frame = 1 Query: 466 GDDIDAEQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDE 876 G D D EAE+ I ++ +FA + L NI + Y +PTP+QR +IP+ + RD++ A+TGSGKTAAF P+I + ++ P G R A+IL+P+REL+ Q + + Sbjct: 82 GSDFDFASLDFEAEDNEEEDKTLSSILALSNPTAKKAKAGSFASFGFSKFLLANIAKKGYKQPTPIQRRSIPLIIDNRDVVGMARTGSGKTAAFVLPLIEKLK----LRSPSGVR-----AVILSPSRELALQTYKQ 209
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: ROK1_YEAS7 (ATP-dependent RNA helicase ROK1 OS=Saccharomyces cerevisiae (strain YJM789) GN=ROK1 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.237e-11 Identity = 37/111 (33.33%), Postives = 63/111 (56.76%), Query Frame = 1 Query: 556 SGENVPPPVNTFAEI----DLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDE 876 SG ++P P+ +F ++ L N+ + +PTP+Q IP+++ RD++AC TGSGKT AF P++ I+ ++ +G LI++PT+EL++QI E Sbjct: 109 SGIDIPLPIGSFEDLISRFSFDRRLLNNLIENGFTEPTPIQCECIPVALNNRDVLACGPTGSGKTLAFLIPLVQQIIDDKQTAGLKG--------LIISPTKELANQIFIE 211 The following BLAST results are available for this feature:
BLAST of CK934523 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 333
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK934523 ID=CK934523; Name=CK934523; organism=Citrus sinensis; type=EST; length=879bpback to top |