CK934523
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: RH8_ARATH (DEAD-box ATP-dependent RNA helicase 8 OS=Arabidopsis thaliana GN=RH8 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.522e-11 Identity = 36/94 (38.30%), Postives = 57/94 (60.64%), Query Frame = 1 Query: 583 NTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQ 864 N F + L EL + I + +P+P+Q +IPI++ GRD++A A+ G+GKTAAFC P++ I ++ V + A+I+ PTREL+ Q Sbjct: 131 NEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVLEKIDQDNNVIQ----------AVIIVPTRELALQ 214
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: MAK5_NEUCR (ATP-dependent RNA helicase mak-5 OS=Neurospora crassa GN=mak-5 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.522e-11 Identity = 40/113 (35.40%), Postives = 60/113 (53.10%), Query Frame = 1 Query: 553 TSGENVPPP------VNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHD 873 T E +P P ++ + +DL + +I + ++ KPT +Q AIP +AG D++ A TGSGKT AF P+I + ++ ALIL+PTREL+ QI D Sbjct: 193 TKLEELPEPEEEEIDMSEWVPLDLSPRMISSIAKLRFSKPTVIQSKAIPEIMAGHDVIGKASTGSGKTLAFGIPVIESWLSAAETRKQNKEERKGATALILSPTRELAQQIRD 305
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DRS1_PICST (ATP-dependent RNA helicase DRS1 OS=Pichia stipitis GN=DRS1 PE=3 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 5.522e-11 Identity = 37/96 (38.54%), Postives = 58/96 (60.42%), Query Frame = 1 Query: 586 TFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHD 873 TF + L + + + Y KP+P+Q +IPI++ GRD++A A TGSGKTAA+ PII E+ + +P ++ ++L PTREL+ Q+ D Sbjct: 223 TFQTLQLSRPVLKGLSQLGYTKPSPIQSASIPIALLGRDIVAGAVTGSGKTAAYMIPII-----ERLLYKP--SKVASTRVIVLTPTRELAIQVGD 311
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DRS1_CRYNE (ATP-dependent RNA helicase DRS1 OS=Cryptococcus neoformans GN=DRS1 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.522e-11 Identity = 41/113 (36.28%), Postives = 61/113 (53.98%), Query Frame = 1 Query: 526 DAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQ 864 DA+ T+ +P ++F ++L L + ++ PTP+Q AIP+++ GRD++ A TGSGKTAAF PI+ E+ R RG L+L PTREL+ Q Sbjct: 206 DAFFSSDPTTTDPTLP---SSFTAMNLSRPLLRALTSLQFTAPTPIQARAIPLALLGRDILGSAVTGSGKTAAFMVPIL-----ERLCYRDRGKGGAACRVLVLCPTRELAVQ 310
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DBP3_VANPO (ATP-dependent RNA helicase DBP3 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=DBP3 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.522e-11 Identity = 42/117 (35.90%), Postives = 66/117 (56.41%), Query Frame = 1 Query: 523 FDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHD 873 F ++ VE + P+ +F+ I L + I K+ KPTP+Q + P +AG+D++ A+TGSGKT AF P I+ I+ + + + V LI++PTREL+SQI+D Sbjct: 97 FFTTNEVAVEDESKLNLRPLLSFSHISLDSRIQAEIS--KFPKPTPIQAVSWPYLLAGKDVIGVAETGSGKTFAFGVPAINNILTKSGSKPGKNGIQV----LIISPTRELASQIYD 207
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: CSHA_GEOKA (DEAD-box ATP-dependent RNA helicase cshA OS=Geobacillus kaustophilus GN=cshA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.522e-11 Identity = 38/100 (38.00%), Postives = 60/100 (60.00%), Query Frame = 1 Query: 580 VNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGI-MREQYVQRPRGARTVYPLALILAPTRELSSQIHDE 876 + TF E+ L +E+ I R + + TP+Q IP+S+ +D++ AQTG+GKTAAF PI+ + ++ VQ AL++APTREL+ Q+ +E Sbjct: 1 MTTFQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVEKVNVKNSAVQ-----------ALVVAPTRELAIQVSEE 89
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: RRP3_SCLS1 (ATP-dependent rRNA helicase rrp3 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=rrp3 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.212e-11 Identity = 37/76 (48.68%), Postives = 51/76 (67.11%), Query Frame = 1 Query: 643 YVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPL-ALILAPTRELSSQI 867 Y PTP+QR +IP+++ GRDL+ A+TGSGKTAAF PI+ ++ +P+ PL L+LAPTREL+ QI Sbjct: 76 YKAPTPIQRESIPLALQGRDLIGLAETGSGKTAAFALPILQSLL-----DKPQ------PLFGLVLAPTRELAYQI 140
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: RRP3_ASPCL (ATP-dependent rRNA helicase rrp3 OS=Aspergillus clavatus GN=rrp3 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.212e-11 Identity = 45/130 (34.62%), Postives = 66/130 (50.77%), Query Frame = 1 Query: 478 DAEQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQI 867 DAE + + D E S E P P +F ++ + ++L Y PTP+Q +IP+++ RDL+ A+TGSGKTAAF PI+ +M +P+ L+LAPTREL+ QI Sbjct: 19 DAESSSSHESVASKHSDNAEAQDGPESSETKPAP-KSFKDLGIIDQLCEACATMGYKAPTPIQAESIPLALQDRDLIGLAETGSGKTAAFALPILQALM-----DKPQSF-----FGLVLAPTRELAFQI 137
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: MAK5_SCLS1 (ATP-dependent RNA helicase mak5 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=mak5 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.212e-11 Identity = 43/120 (35.83%), Postives = 67/120 (55.83%), Query Frame = 1 Query: 526 DAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIIS------GIMREQYVQRPRGARTVYPLALILAPTRELSSQI 867 + +E + + +GE V+ + E+DL + + + + KPTP+Q AIP +AG D++ A TGSGKT AF PI+ G + E +++ T P ALIL+PTREL+ Q+ Sbjct: 197 NVFEALDEDAAGE---VEVSGWVELDLSSNTLMALSKMGFSKPTPIQSEAIPEVLAGHDVVGKASTGSGKTLAFGIPIVEKWLEVYGELDEDELKK----STRPPTALILSPTRELAHQL 309
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: HAS1_PHANO (ATP-dependent RNA helicase HAS1 OS=Phaeosphaeria nodorum GN=HAS1 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.212e-11 Identity = 44/123 (35.77%), Postives = 67/123 (54.47%), Query Frame = 1 Query: 499 EAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQI 867 +A +G N A D+P TS V P F E++L E I+ + T +QR AIP ++G+D++ A+TGSGKT AF P I + ++ +PR V ++++PTREL+ QI Sbjct: 104 DAAGSGANALAVADLPSGTSIPTVDDPTR-FDELNLSERTMEAIKTMGFESMTEIQRKAIPPLLSGKDVLGAAKTGSGKTLAFLIPAIEMLSSMRF--KPRNGTGV----IVVSPTRELALQI 219 The following BLAST results are available for this feature:
BLAST of CK934523 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 333
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934523 ID=CK934523; Name=CK934523; organism=Citrus sinensis; type=EST; length=879bpback to top |