CK934523
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DRS1_COCIM (ATP-dependent RNA helicase DRS1 OS=Coccidioides immitis GN=DRS1 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.212e-11 Identity = 51/139 (36.69%), Postives = 70/139 (50.36%), Query Frame = 1 Query: 472 DIDAEQPFAEAENTGINFDAYEDIPV---ETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEA 879 D + E P A+ F A E+ P ETS + TF +L + + + PTP+QR AIP+ + G+DL+ A TGSGKTAAF PI+ E+ + RPR T IL PTREL+ Q ++ A Sbjct: 287 DSEEEDPEEVAKRNA--FFAPEENPTKSEETSSNS------TFQNFNLSRPILRGLAAVGFSAPTPIQRKAIPVGLLGKDLVGGAVTGSGKTAAFIIPIL-----ERLLYRPRKVPT--SRVAILMPTRELAVQCYNVA 410
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DEAD_BUCAP (Cold-shock DEAD box protein A homolog OS=Buchnera aphidicola subsp. Schizaphis graminum GN=deaD PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.212e-11 Identity = 36/95 (37.89%), Postives = 55/95 (57.89%), Query Frame = 1 Query: 583 NTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQI 867 +TF+ + L + ++ + YVKP+P+Q IP+ + GRD++ AQTGSGKTAAF P++ + P L+LAPTREL+ Q+ Sbjct: 6 STFSFLGLNPFIIKSLSKMGYVKPSPIQAACIPLLLEGRDVLGMAQTGSGKTAAFSLPLLHNL----------NINLKAPQILVLAPTRELAVQV 90
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DEAD_BUCAI (Cold-shock DEAD box protein A homolog OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=deaD PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.212e-11 Identity = 36/95 (37.89%), Postives = 54/95 (56.84%), Query Frame = 1 Query: 583 NTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQI 867 +TF+ + L + ++ YVKP+P+Q IP+ + GRD++ AQTGSGKTAAF P++ + P L+LAPTREL+ Q+ Sbjct: 6 STFSFLGLNPFIIQSLNEMGYVKPSPIQASCIPLLLEGRDVLGMAQTGSGKTAAFSLPLLHNL----------NINLKAPQILVLAPTRELAVQV 90
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DDX49_MOUSE (Probable ATP-dependent RNA helicase DDX49 OS=Mus musculus GN=Ddx49 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.212e-11 Identity = 40/96 (41.67%), Postives = 52/96 (54.17%), Query Frame = 1 Query: 589 FAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDE 876 FAEI L L R+ +PTPVQ IP + GRD + CA+TGSGKTAAF PI+ + + Y L+L PTREL+ QI ++ Sbjct: 4 FAEIGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQKLSEDPY----------GIFCLVLTPTRELAYQIAEQ 89
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DBP4_YEAST (ATP-dependent RNA helicase DBP4 OS=Saccharomyces cerevisiae GN=DBP4 PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 7.212e-11 Identity = 34/95 (35.79%), Postives = 58/95 (61.05%), Query Frame = 1 Query: 589 FAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHD 873 F ++ + + +R ++K T +Q +IP+S+ G D++A A+TGSGKT AF P+I + RE++ + ALI++PTREL+ QI++ Sbjct: 43 FKDLPISDPTLKGLRESSFIKLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFLVPVIEKLYREKWTEFDGLG------ALIISPTRELAMQIYE 131
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DBP4_YEAS7 (ATP-dependent RNA helicase DBP4 OS=Saccharomyces cerevisiae (strain YJM789) GN=DBP4 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.212e-11 Identity = 34/95 (35.79%), Postives = 58/95 (61.05%), Query Frame = 1 Query: 589 FAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHD 873 F ++ + + +R ++K T +Q +IP+S+ G D++A A+TGSGKT AF P+I + RE++ + ALI++PTREL+ QI++ Sbjct: 43 FKDLPISDPTLKGLRESSFIKLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFLVPVIEKLYREKWTEFDGLG------ALIISPTRELAMQIYE 131
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DBP3_KLULA (ATP-dependent RNA helicase DBP3 OS=Kluyveromyces lactis GN=DBP3 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.212e-11 Identity = 39/108 (36.11%), Postives = 66/108 (61.11%), Query Frame = 1 Query: 550 ETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHD 873 + SG N+ P ++ F+++ +++ I K+ KPTP+Q + P +AG+D++ A+TGSGKT AF P I+ I+ G ++ L+++PTREL+SQI+D Sbjct: 84 DPSGSNIVPYLD-FSQVSFIDQIQKEIS--KFPKPTPIQAVSWPYLLAGKDVIGIAETGSGKTFAFGVPAINNIVTS-------GDKSSSVKVLVISPTRELASQIYD 181
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: Y956_STAHJ (Probable DEAD-box ATP-dependent RNA helicase SH0956 OS=Staphylococcus haemolyticus (strain JCSC1435) GN=SH0956 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.419e-11 Identity = 34/99 (34.34%), Postives = 59/99 (59.60%), Query Frame = 1 Query: 580 VNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDE 876 + F E+ + ++ + + +PTP+Q+ +IP ++ G+D++ AQTG+GKT AF P+I ++ + VQ ALILAPTREL+ Q+ ++ Sbjct: 1 MQNFKELGISDKTVETLEAMGFKEPTPIQKDSIPYTLEGKDILGQAQTGTGKTGAFGIPLIEKVVGQSGVQ-----------ALILAPTRELAMQVAEQ 88
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DRS1_GIBZE (ATP-dependent RNA helicase DRS1 OS=Gibberella zeae GN=DRS1 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.419e-11 Identity = 37/109 (33.94%), Postives = 60/109 (55.05%), Query Frame = 1 Query: 544 PVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIH 870 P E + + ++F + L + + + KPTP+Q +IPI++ G+D++ A+TGSGKT AF PI+ E+ + RP+ T ++L PTREL+ Q H Sbjct: 243 PEEENNPDKKATASSFQTMSLSRPIMRGLASVGFTKPTPIQAKSIPIALMGKDVVGGAETGSGKTGAFILPIL-----ERLLYRPKKIPTT--RVVVLLPTRELAIQCH 344
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DDX27_DICDI (Probable ATP-dependent RNA helicase ddx27 OS=Dictyostelium discoideum GN=ddx27 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.419e-11 Identity = 38/93 (40.86%), Postives = 57/93 (61.29%), Query Frame = 1 Query: 586 TFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQ 864 TF E+ L L +++ + +PTP+Q AIP+++ G+D++A A TGSGKTAAF P++ E+ + R R + LIL PTREL+ Q Sbjct: 191 TFEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGKDILASASTGSGKTAAFLLPVL-----ERLLFRDSEYRAI--RVLILLPTRELALQ 276 The following BLAST results are available for this feature:
BLAST of CK934523 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 333
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934523 ID=CK934523; Name=CK934523; organism=Citrus sinensis; type=EST; length=879bpback to top |