CK934523
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: RRP3_ASPFU (ATP-dependent rRNA helicase rrp3 OS=Aspergillus fumigatus GN=rrp3 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.006e-12 Identity = 45/117 (38.46%), Postives = 65/117 (55.56%), Query Frame = 1 Query: 529 AYEDIPVETSGENVP----PPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQI 867 A +D P+ET E P +F ++ + ++L Y PTP+Q +IP+++ GRDL+ A+TGSGKTAAF PI+ +M + P+ LILAPTREL+ QI Sbjct: 30 AQQDDPLETQDEATATESRPAPKSFKDLGIIDQLCEACETMGYKAPTPIQAESIPLALQGRDLIGLAETGSGKTAAFALPILQALM-----ENPQSF-----FGLILAPTRELAFQI 136
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: RH5_ARATH (DEAD-box ATP-dependent RNA helicase 5 OS=Arabidopsis thaliana GN=RH5 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.006e-12 Identity = 50/135 (37.04%), Postives = 74/135 (54.81%), Query Frame = 1 Query: 478 DAEQPFAEAENTGINFDAYEDIPVETSG--ENVPPPVNTFAEIDLGEELNLNIRRCK-YVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHD 873 D + EAE+ G + + V G E + TFAE +L E + + CK + KP+P+Q H P + GRDL+ A+TGSGKT AF P I ++++ + G++ V P L+L+PTREL+ QI D Sbjct: 79 DVPEKKLEAEDLGEGESEQQKVVVTGKGVEEAKYAALKTFAESNLPENV---LDCCKTFEKPSPIQSHTWPFLLDGRDLIGIAKTGSGKTLAFGIPAIMHVLKKN-KKIGGGSKKVNPTCLVLSPTRELAVQISD 209
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: PRP5_EMENI (Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Emericella nidulans GN=prp5 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.006e-12 Identity = 44/132 (33.33%), Postives = 71/132 (53.79%), Query Frame = 1 Query: 481 AEQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDE 876 A+ EA N + D ++ G +VP PV +++ LG + I + + T +Q AIP ++GRD++ A+TGSGKT AF P+ I ++ ++ G P+ LI+ PTREL++QIH + Sbjct: 512 AQMSEEEAANLRLELDG-----IKVRGLDVPKPVQKWSQCGLGIQTLDVIDKLGFASLTSIQAQAIPAIMSGRDVIGVAKTGSGKTMAFLIPMFRHIKDQRPLENMEG-----PIGLIMTPTRELATQIHKD 633
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: MAK5_PHANO (ATP-dependent RNA helicase MAK5 OS=Phaeosphaeria nodorum GN=MAK5 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.006e-12 Identity = 41/113 (36.28%), Postives = 66/113 (58.41%), Query Frame = 1 Query: 529 AYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQI 867 A++ + E+ V+ + E++L ++ ++ + K+ KPT +Q IP +AGRD++ A TGSGKT AF PII + + + + + PLALI+APTREL+ QI Sbjct: 231 AFDILANRADDEDDEVDVSAWEELELSTKILESLAKLKFSKPTTIQASTIPEIMAGRDVIGKASTGSGKTLAFGIPIIESYLASK--SKSKDVKDKTPLALIIAPTRELAHQI 341
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DRS1_USTMA (ATP-dependent RNA helicase DRS1 OS=Ustilago maydis GN=DRS1 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.006e-12 Identity = 50/146 (34.25%), Postives = 72/146 (49.32%), Query Frame = 1 Query: 451 EVNPFGDDIDAEQPFAEAENTGINFDAYEDIPVETSGENVPPPVNT------FAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIH 870 E N DD D E +A + + P+ TS ++ +T F DL + + + KPTP+Q IPI++AG+D++A A TGSGKTAAF P I + + P A++ LILAPTREL+ Q + Sbjct: 287 ESNSSEDDSDLETEQEKARKAAF----FAEDPIATSADSSSKSKSTNDAESSFGAFDLSRPVLRALSSLSFHKPTPIQSRTIPIALAGKDIVAGAVTGSGKTAAFMIPTIERLTWRAKTRTPHEAKS---RVLILAPTRELAIQCY 425
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DBP9_EMENI (ATP-dependent RNA helicase dbp9 OS=Emericella nidulans GN=dbp9 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.006e-12 Identity = 39/93 (41.94%), Postives = 60/93 (64.52%), Query Frame = 1 Query: 589 FAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQI 867 F ++L L + + K+ KPTPVQ AIP+++ G+D++A A+TGSGKTAA+ PI+ I++++ + A T LIL PTREL+ Q+ Sbjct: 30 FETLNLDPRLRQALVKEKFSKPTPVQAKAIPLALEGKDILARAKTGSGKTAAYVLPILQTILQKKAIDPSMKATT----GLILVPTRELAEQV 118
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DBP4_PHANO (ATP-dependent RNA helicase DBP4 OS=Phaeosphaeria nodorum GN=DBP4 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.006e-12 Identity = 36/97 (37.11%), Postives = 58/97 (59.79%), Query Frame = 1 Query: 583 NTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHD 873 N F+++ L + ++ C + T +QR A+P+++ G D++ A+TGSGKT +F P++ + R Q+V G ALIL+PTREL+ QI D Sbjct: 49 NDFSDLPLSDPTKQGLKACHFAVMTDIQRKAVPLALKGHDILGAAKTGSGKTLSFIIPVLENLYRLQHVGADAGLG-----ALILSPTRELAIQIFD 140
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DBP4_KLULA (ATP-dependent RNA helicase DBP4 OS=Kluyveromyces lactis GN=DBP4 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.006e-12 Identity = 39/112 (34.82%), Postives = 65/112 (58.04%), Query Frame = 1 Query: 547 VETSGENVPPPV---NTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHD 873 +ET E P + N F ++ + E+ ++ ++K T +QR +IP+S+ G D++ A+TGSGKT AF P+I + RE++ ALI++PTREL+ QI++ Sbjct: 26 LETKVEEYNPKIAKANLFQDLPISEQTLKGLKEAAFIKLTEIQRESIPLSLKGHDVLGAAKTGSGKTLAFLIPVIEKLYREKWTDMDGLG------ALIISPTRELAMQIYE 131
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DBP2_NEOFI (ATP-dependent RNA helicase dbp2 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=dbp2 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.006e-12 Identity = 40/106 (37.74%), Postives = 59/106 (55.66%), Query Frame = 1 Query: 559 GENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDE 876 G NVP PV F E + + ++ + +PT +Q P++++GRD++ A+TGSGKT +C P I I + + G P+ LILAPTREL+ QI E Sbjct: 111 GRNVPRPVENFDEAGFPQYVLSEVKAQGFERPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPGDG-----PIVLILAPTRELAVQIQTE 211
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: RRP3_ASPNC (ATP-dependent rRNA helicase rrp3 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=rrp3 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.314e-12 Identity = 41/94 (43.62%), Postives = 58/94 (61.70%), Query Frame = 1 Query: 586 TFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQI 867 TF E+ + E+L Y PTP+QR +IP+++ GRDL+ A+TGSGKTAAF PI+ +M ++P+ L+LAPTREL+ QI Sbjct: 49 TFKELGIIEQLCEACETMGYKAPTPIQRESIPLALKGRDLIGLAETGSGKTAAFALPILQALM-----EKPQPF-----FGLVLAPTRELAYQI 132 The following BLAST results are available for this feature:
BLAST of CK934523 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 333
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934523 ID=CK934523; Name=CK934523; organism=Citrus sinensis; type=EST; length=879bpback to top |