CK934524

Overview
NameCK934524
Unique NameCK934524
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length694
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934524 vs. ExPASy Swiss-Prot
Match: NDK_PHOLL (Nucleoside diphosphate kinase OS=Photorhabdus luminescens subsp. laumondii GN=ndk PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.276e-27
Identity = 58/136 (42.65%), Postives = 86/136 (63.24%), Query Frame = 3
Query:   72 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 479
            +E+TF +IKP+ V++  +G I  RFE  GF +   K++ + R  AE  Y +   +PFF  L+E++TSGP+V  + EGE  V+  R ++GATNP  +  GT+R D A     N +HGSD+VESA +EIA +F +  I
Sbjct:    3 VERTFSIIKPNAVKKNAIGAIYARFESAGFKIIAAKMLHLTREQAEGFYAEHKGRPFFDGLVEFMTSGPIVVQVLEGENAVQRHRDLMGATNPDNALAGTLRADYADSFTENAVHGSDAVESANREIAYFFTEDEI 138          
BLAST of CK934524 vs. ExPASy Swiss-Prot
Match: NDK_ENTS8 (Nucleoside diphosphate kinase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=ndk PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.276e-27
Identity = 60/136 (44.12%), Postives = 85/136 (62.50%), Query Frame = 3
Query:   72 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 479
            +E+TF +IKP+ V + ++G I  RFE  GF + G K++ +    A   Y +   KPFF  L+E++TSGP+V  + E E  V+  R ++GATNPA +  GT+R D A     N  HGSDSVESA +EIA +F +G I
Sbjct:    3 IERTFSIIKPNAVAKNVIGSIFARFESAGFKIIGTKMLHLTVEQARGFYAEHEGKPFFDGLVEFMTSGPIVVSVLESENAVQRHRDLLGATNPANALAGTLRADYADSFTENGTHGSDSVESANREIAYFFGEGEI 138          
BLAST of CK934524 vs. ExPASy Swiss-Prot
Match: NDK_ENT38 (Nucleoside diphosphate kinase OS=Enterobacter sp. (strain 638) GN=ndk PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.276e-27
Identity = 59/136 (43.38%), Postives = 85/136 (62.50%), Query Frame = 3
Query:   72 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 479
            +E+TF +IKP+ V + ++G I  RFE  GF + G K++ +    A   Y +   KPFF  L+E++TSGP+V  + E E  V+  R ++GATNPA +  GT+R D A     N  HGSDSVESA +EIA +F +G +
Sbjct:    3 IERTFSIIKPNAVAKNVIGSIFARFESAGFKIVGTKMLHLTVEQARGFYAEHDGKPFFDGLVEFMTSGPIVVSVLESENAVQRHRDLLGATNPANALAGTLRADYADSFTENGTHGSDSVESAAREIAYFFAEGEV 138          
BLAST of CK934524 vs. ExPASy Swiss-Prot
Match: NDK_DESOH (Nucleoside diphosphate kinase OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=ndk PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.276e-27
Identity = 59/131 (45.04%), Postives = 87/131 (66.41%), Query Frame = 3
Query:   72 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 464
            ME+T  ++KPDGV+RGL+GE++ R EK+G  +  +K++ + R  AE  Y     +PFF SL  +++SGPVV M+ EGE  +   RT++GATN   +A GTIR D A    RN++HGSD+ ++A  EI  +F
Sbjct:    1 MERTLSIVKPDGVERGLIGEVVRRLEKEGLKIIAMKMIHMTRAQAEGFYAVHRERPFFESLTTFMSSGPVVVMVLEGEDAILRYRTLMGATNYKDAAEGTIRRDFATEIERNVVHGSDAPDTAAFEIGYFF 131          
BLAST of CK934524 vs. ExPASy Swiss-Prot
Match: NDK_BORPD (Nucleoside diphosphate kinase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=ndk PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.276e-27
Identity = 55/133 (41.35%), Postives = 85/133 (63.91%), Query Frame = 3
Query:   72 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD 470
            +E+T  +IKPD V + ++G+II RFE  G  +   +L  + R  AE+ Y     +PFF  L++++ SGPV   + EGEG ++  R ++GAT+P ++APGTIR D A     N +HGSD+ E+A  E+A +FP+
Sbjct:    3 VERTLSIIKPDAVAKNVIGQIIARFENAGLKVIAARLQQLSRADAERFYAVHKERPFFKDLVDFMVSGPVFVQVLEGEGAIQKNRDLMGATDPKKAAPGTIRADFADSIDANAVHGSDAAETAAVEVAFFFPE 135          
BLAST of CK934524 vs. ExPASy Swiss-Prot
Match: NDK_YERE8 (Nucleoside diphosphate kinase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=ndk PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.197e-27
Identity = 59/136 (43.38%), Postives = 86/136 (63.24%), Query Frame = 3
Query:   72 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 479
            +E+TF +IKP+ V +  +G I  RFE  GF +   K++ + +  AE  Y +   +PFF  L+E++TSGPV+  + EGE  V+  R I+GATNP  +  GT+R D A     N +HGSD+VESAQ+EIA +F +  I
Sbjct:    3 VERTFSIIKPNAVAKNNIGAIYARFESAGFKIIAAKMLHLTKEQAEGFYAEHKGRPFFDGLVEFMTSGPVMIQVLEGENAVQRHRDIMGATNPDNALAGTLRADFADSFTENAVHGSDAVESAQREIAYFFSENEI 138          
BLAST of CK934524 vs. ExPASy Swiss-Prot
Match: NDK_METEP (Nucleoside diphosphate kinase OS=Methylobacterium extorquens (strain PA1) GN=ndk PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.197e-27
Identity = 60/135 (44.44%), Postives = 84/135 (62.22%), Query Frame = 3
Query:   75 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 479
            E+TF ++KPD  +R + G +    E  G  + G + + + R  AEK YE    +PFFG L+E++TSGPVV  + EGE  V   R ++GATNPAQ+A GTIR   A   G N +HGSDS ++A+ EIA +F +  I
Sbjct:    4 ERTFSILKPDATRRNITGAVNAVIEAAGLRIVGQRRIRMTREQAEKFYEVHKERPFFGELVEFMTSGPVVVQVLEGENAVAKYREVMGATNPAQAADGTIRKQFAESVGENTVHGSDSADNARLEIAQFFNEADI 138          
BLAST of CK934524 vs. ExPASy Swiss-Prot
Match: NDK_LEGPL (Nucleoside diphosphate kinase OS=Legionella pneumophila (strain Lens) GN=ndk PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.197e-27
Identity = 58/130 (44.62%), Postives = 83/130 (63.85%), Query Frame = 3
Query:   75 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 464
            E T  +IKPD V + ++GEI  RFEK G  +   K+  + R  AE  Y+   ++PFF  L++++ SGPV+  + +GE  V   R I+GATNP ++APGTIR D A     N +HGSDS+E+A +EIA +F
Sbjct:    4 ELTLSIIKPDAVAKSVIGEIYTRFEKAGLDIVAAKMTQLSREQAESFYDIHRARPFFKDLVDFMISGPVMIQVLKGENAVAKNREIMGATNPKEAAPGTIRADFADSIDANAVHGSDSLENAAREIAFFF 133          
BLAST of CK934524 vs. ExPASy Swiss-Prot
Match: NDK_LEGPH (Nucleoside diphosphate kinase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=ndk PE=3 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 8.197e-27
Identity = 58/130 (44.62%), Postives = 83/130 (63.85%), Query Frame = 3
Query:   75 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 464
            E T  +IKPD V + ++GEI  RFEK G  +   K+  + R  AE  Y+   ++PFF  L++++ SGPV+  + +GE  V   R I+GATNP ++APGTIR D A     N +HGSDS+E+A +EIA +F
Sbjct:    4 ELTLSIIKPDAVAKSVIGEIYTRFEKAGLDIVAAKMTQLSREQAESFYDIHRARPFFKDLVDFMISGPVMIQVLKGENAVAKNREIMGATNPKEAAPGTIRADFADSIDANAVHGSDSLENAAREIAFFF 133          
BLAST of CK934524 vs. ExPASy Swiss-Prot
Match: NDK_LEGPC (Nucleoside diphosphate kinase OS=Legionella pneumophila (strain Corby) GN=ndk PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.197e-27
Identity = 58/130 (44.62%), Postives = 83/130 (63.85%), Query Frame = 3
Query:   75 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 464
            E T  +IKPD V + ++GEI  RFEK G  +   K+  + R  AE  Y+   ++PFF  L++++ SGPV+  + +GE  V   R I+GATNP ++APGTIR D A     N +HGSDS+E+A +EIA +F
Sbjct:    4 ELTLSIIKPDAVAKSVIGEIYTRFEKAGLDIVAAKMTQLSREQAENFYDIHRARPFFKDLVDFMISGPVMIQVLKGENAVAKNREIMGATNPKEAAPGTIRADFADSIDANAVHGSDSLENAAREIAFFF 133          
The following BLAST results are available for this feature:
BLAST of CK934524 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK_PHOLL6.276e-2742.65Nucleoside diphosphate kinase OS=Photorhabdus lumi... [more]
NDK_ENTS86.276e-2744.12Nucleoside diphosphate kinase OS=Enterobacter saka... [more]
NDK_ENT386.276e-2743.38Nucleoside diphosphate kinase OS=Enterobacter sp. ... [more]
NDK_DESOH6.276e-2745.04Nucleoside diphosphate kinase OS=Desulfococcus ole... [more]
NDK_BORPD6.276e-2741.35Nucleoside diphosphate kinase OS=Bordetella petrii... [more]
NDK_YERE88.197e-2743.38Nucleoside diphosphate kinase OS=Yersinia enteroco... [more]
NDK_METEP8.197e-2744.44Nucleoside diphosphate kinase OS=Methylobacterium ... [more]
NDK_LEGPL8.197e-2744.62Nucleoside diphosphate kinase OS=Legionella pneumo... [more]
NDK_LEGPH8.197e-2744.62Nucleoside diphosphate kinase OS=Legionella pneumo... [more]
NDK_LEGPC8.197e-2744.62Nucleoside diphosphate kinase OS=Legionella pneumo... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004258_A10 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IF_A10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934524 ID=CK934524; Name=CK934524; organism=Citrus sinensis; type=EST; length=694bp
GGGGCTCGCATGTGTGCTGTGCTATTTCACTCAATTCTCAAAACAAGTTG
GTTTCTCTGAATCTCAAAGAAATGGAACAAACCTTCATCATGATCAAGCC
CGATGGGGTCCAAAGAGGCCTTGTTGGTGAAATCATCATCAGATTTGAGA
AGAAGGGTTTCTCCTTGAAGGGTTTGAAGCTTATGACTGTGGACCGCCCT
TTTGCTGAGAAGCACTATGAGGATTTGTCATCGAAGCCTTTCTTTGGTTC
TCTGATTGAGTACATTACCTCTGGTCCTGTTGTTGCTATGATTTGGGAGG
GTGAAGGTGTTGTTAAGACTGGCCGCACTATTATTGGAGCCACCAACCCT
GCGCAGTCTGCTCCTGGAACCATCCGTGGTGATTTGGCTATCGTGACGGG
CAGGAATATCATCCATGGAAGTGACTCAGTTGAGAGTGCCCAGAAAGAAA
TCGCCTTGTGGTTCCCTGATGGCCCTATTAACTGGCAGAGCAGCCTTCAC
CCTTGGATCTATGAGTAAACTAATGTTTGGTTGAGGAGCCTAATTGTTCC
TGCAGTTAGACTTATCCCTATCCCTATCCCTATTTCCTTATTTATGGTTA
CTCCTTGTTGGTGAACTGTTATGAAGTATTGAGTTAAATTGAGACCAATC
CTGGTTATGTTGGCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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