CK934524

Overview
NameCK934524
Unique NameCK934524
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length694
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934524 vs. ExPASy Swiss-Prot
Match: NDK_BACCZ (Nucleoside diphosphate kinase OS=Bacillus cereus (strain ZK / E33L) GN=ndk PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.139e-44
Identity = 81/148 (54.73%), Postives = 111/148 (75.00%), Query Frame = 3
Query:   72 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGP-INWQSSLHPWIY 512
            ME+TF+M+KPDGVQR  +GEI+ RFEKKGF L G KLM V    A +HY + + KPFFG L+++ITSGPV AM+W+GEGVV T R ++G T P ++APGTIRGD  +   +NIIHGSDS+ESA++EI ++F +   +++   ++ WIY
Sbjct:    1 MEKTFLMVKPDGVQRAFIGEIVARFEKKGFQLVGAKLMQVTPEIAGQHYAEHTEKPFFGELVDFITSGPVFAMVWQGEGVVDTARNMMGKTRPHEAAPGTIRGDFGVTVAKNIIHGSDSLESAEREIGIFFKEEELVDYSKLMNEWIY 148          
BLAST of CK934524 vs. ExPASy Swiss-Prot
Match: NDK_BACAN (Nucleoside diphosphate kinase OS=Bacillus anthracis GN=ndk PE=1 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.139e-44
Identity = 81/148 (54.73%), Postives = 111/148 (75.00%), Query Frame = 3
Query:   72 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGP-INWQSSLHPWIY 512
            ME+TF+M+KPDGVQR  +GEI+ RFEKKGF L G KLM V    A +HY + + KPFFG L+++ITSGPV AM+W+GEGVV T R ++G T P ++APGTIRGD  +   +NIIHGSDS+ESA++EI ++F +   +++   ++ WIY
Sbjct:    1 MEKTFLMVKPDGVQRAFIGEIVARFEKKGFQLVGAKLMQVTPEIAGQHYAEHTEKPFFGELVDFITSGPVFAMVWQGEGVVDTARNMMGKTRPHEAAPGTIRGDFGVTVAKNIIHGSDSLESAEREIGIFFKEEELVDYSKLMNEWIY 148          
BLAST of CK934524 vs. ExPASy Swiss-Prot
Match: NDK_SYNPW (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain WH7803) GN=ndk PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.487e-44
Identity = 86/145 (59.31%), Postives = 108/145 (74.48%), Query Frame = 3
Query:   75 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPW 506
            E+TFI IKPDGVQRGL+GEI+ RFE+KGF L GLK +T  R  AE+HY     +PFF  L+++ITSGPVVAM+WEG+GV+ + R +IGAT P ++ PGTIRGDLAI  GRN+IHGSD+ E+AQ EI LWF    + +W  S   W
Sbjct:    4 ERTFIAIKPDGVQRGLIGEILGRFERKGFKLVGLKQLTPSRELAEQHYGVHKERPFFAGLVDFITSGPVVAMVWEGDGVIASARKLIGATKPLEAEPGTIRGDLAINIGRNVIHGSDAPETAQFEIGLWFQASELSDWTPSDQGW 148          
BLAST of CK934524 vs. ExPASy Swiss-Prot
Match: NDK_YEAST (Nucleoside diphosphate kinase OS=Saccharomyces cerevisiae GN=YNK1 PE=1 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.536e-44
Identity = 82/150 (54.67%), Postives = 111/150 (74.00%), Query Frame = 3
Query:   69 EMEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 515
            + E+TFI +KPDGVQRGLV +I+ RFEKKG+ L  +KL+  D    E+HY +   KPFF  ++ ++ SGP++A +WEG+ VV+ GRTI+GATNP  SAPGTIRGD  I  GRN+ HGSDSV+SA++EI LWF  +  ++W+S+   WIYE
Sbjct:    4 QTERTFIAVKPDGVQRGLVSQILSRFEKKGYKLVAIKLVKADDKLLEQHYAEHVGKPFFPKMVSFMKSGPILATVWEGKDVVRQGRTILGATNPLGSAPGTIRGDFGIDLGRNVCHGSDSVDSAEREINLWFKKEELVDWESNQAKWIYE 153          
BLAST of CK934524 vs. ExPASy Swiss-Prot
Match: NDK_STAHJ (Nucleoside diphosphate kinase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=ndk PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.313e-44
Identity = 85/149 (57.05%), Postives = 110/149 (73.83%), Query Frame = 3
Query:   72 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 515
            ME+TF+MIKPD +QR LVGEII R E+KG  L G KLMTV +  AE+HY + + KPF+G LI +ITS PV AM+ EGE  V   R IIG TNP+++ PG+IRGDL +  GRN+IHGSDSVESAQ+EI LWF +  + ++++    W+YE
Sbjct:    1 MERTFLMIKPDAIQRNLVGEIISRIERKGLKLVGAKLMTVPQALAEEHYSEHTDKPFYGKLISFITSAPVFAMVVEGEDAVDVSRHIIGKTNPSEATPGSIRGDLGLTVGRNVIHGSDSVESAQREINLWFKEEELSSYEAPRDTWLYE 149          
BLAST of CK934524 vs. ExPASy Swiss-Prot
Match: NDK_OCEIH (Nucleoside diphosphate kinase OS=Oceanobacillus iheyensis GN=ndk PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.313e-44
Identity = 82/148 (55.41%), Postives = 108/148 (72.97%), Query Frame = 3
Query:   72 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIY 512
            ME+TF+M+KPDGVQR L+GEI+ RFE KG+ L G KLM V    AE HY +   +PFFG L+++ITSGPV AM+WEGE V+ T R ++G TNP ++ P TIRGD  I  G+NIIHGSDS ESA++EI L+F +  I +++   + WIY
Sbjct:    1 MEKTFLMVKPDGVQRELIGEIVKRFETKGYKLAGAKLMQVSNQLAETHYSEHKERPFFGELVDFITSGPVFAMVWEGENVIATARKMMGKTNPLEADPSTIRGDFGISVGKNIIHGSDSAESAEREITLFFTENEIVSYEKQANNWIY 148          
BLAST of CK934524 vs. ExPASy Swiss-Prot
Match: NDK_BACHD (Nucleoside diphosphate kinase OS=Bacillus halodurans GN=ndk PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.313e-44
Identity = 82/147 (55.78%), Postives = 110/147 (74.83%), Query Frame = 3
Query:   72 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPIN-WQSSLHPWI 509
            ME+T++MIKPDGVQR L+GEI+ RFEKKGF+L G KLMTV +  AE HY +   +PFFG L+++ITSGPV AM+WEGE V+ T R ++GATNPA + PGTIRGD  +    N+IHGSDS ESA++EI ++F    +N +   ++ W+
Sbjct:    1 MERTYLMIKPDGVQRNLIGEIVSRFEKKGFTLIGAKLMTVTKEQAETHYAEHKERPFFGELVDFITSGPVFAMVWEGENVIATARKMMGATNPADAEPGTIRGDFGVQVAMNVIHGSDSPESAKREIDIFFDSSELNEYDKVVNRWV 147          
BLAST of CK934524 vs. ExPASy Swiss-Prot
Match: NDK_DESRM (Nucleoside diphosphate kinase OS=Desulfotomaculum reducens (strain MI-1) GN=ndk PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 4.326e-44
Identity = 82/149 (55.03%), Postives = 116/149 (77.85%), Query Frame = 3
Query:   72 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 515
            ME+T++M+KPDGVQRGL+G+II +FE+KG+ + GLK+M + R  AE+HY + + KPFF  L+++ITSGPVVAM+ EG+ VV T R ++GATNP ++APGTIR    +  GRNIIHGSDS+ESAQ+EI ++F  +  I++  ++  WIYE
Sbjct:    1 MERTYLMVKPDGVQRGLIGQIISKFEQKGYKIVGLKMMQISREVAERHYGEHAGKPFFNGLVDFITSGPVVAMVIEGKDVVTTAREMMGATNPLKAAPGTIRATFGVDVGRNIIHGSDSLESAQREIGIFFKSEELIDYDRAIDTWIYE 149          
BLAST of CK934524 vs. ExPASy Swiss-Prot
Match: NDK_ASHGO (Nucleoside diphosphate kinase OS=Ashbya gossypii GN=NDK1 PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 4.326e-44
Identity = 83/148 (56.08%), Postives = 110/148 (74.32%), Query Frame = 3
Query:   75 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 515
            E+TFI IKPDGVQRGL+ +I+ RFE +G+ L G+KL+T      ++HY +   KPFF  ++ Y+TSGP++A +WEG+ VVK GR I+GATNP  SAPGTIRGD A+  GRN+ HGSDSVESAQ+EI LWF  +  ++W+ +   WIYE
Sbjct:    4 ERTFIAIKPDGVQRGLISKILSRFESRGYKLVGIKLVTPTENLLKQHYAEHVEKPFFPKMLAYMTSGPILATVWEGKDVVKQGRVILGATNPLNSAPGTIRGDFALDMGRNVCHGSDSVESAQREIDLWFKKEELVDWKLNQLSWIYE 151          
BLAST of CK934524 vs. ExPASy Swiss-Prot
Match: NDK_STACT (Nucleoside diphosphate kinase OS=Staphylococcus carnosus (strain TM300) GN=ndk PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.259e-43
Identity = 86/149 (57.72%), Postives = 110/149 (73.83%), Query Frame = 3
Query:   72 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPIN-WQSSLHPWIYE 515
            ME+TF+MIKPDGVQR LVGEII R EKKG  L G K MTV +  AE HY + + KPF+  L+ +ITS PV AM+ EGE VV+  R +IG TNP ++APGTIRGDL +  GRN+IHGSDSVESA++EI+LWF    ++ + ++   W+YE
Sbjct:    1 MERTFLMIKPDGVQRKLVGEIITRLEKKGLKLVGGKFMTVSKEKAETHYGEHADKPFYEGLVSFITSAPVFAMVVEGENVVEVTRNMIGKTNPTEAAPGTIRGDLGLTVGRNVIHGSDSVESAKREISLWFEPNELSVYTANDEEWLYE 149          
The following BLAST results are available for this feature:
BLAST of CK934524 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK_BACCZ1.139e-4454.73Nucleoside diphosphate kinase OS=Bacillus cereus (... [more]
NDK_BACAN1.139e-4454.73Nucleoside diphosphate kinase OS=Bacillus anthraci... [more]
NDK_SYNPW1.487e-4459.31Nucleoside diphosphate kinase OS=Synechococcus sp.... [more]
NDK_YEAST2.536e-4454.67Nucleoside diphosphate kinase OS=Saccharomyces cer... [more]
NDK_STAHJ3.313e-4457.05Nucleoside diphosphate kinase OS=Staphylococcus ha... [more]
NDK_OCEIH3.313e-4455.41Nucleoside diphosphate kinase OS=Oceanobacillus ih... [more]
NDK_BACHD3.313e-4455.78Nucleoside diphosphate kinase OS=Bacillus halodura... [more]
NDK_DESRM4.326e-4455.03Nucleoside diphosphate kinase OS=Desulfotomaculum ... [more]
NDK_ASHGO4.326e-4456.08Nucleoside diphosphate kinase OS=Ashbya gossypii G... [more]
NDK_STACT1.259e-4357.72Nucleoside diphosphate kinase OS=Staphylococcus ca... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004258_A10 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IF_A10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934524 ID=CK934524; Name=CK934524; organism=Citrus sinensis; type=EST; length=694bp
GGGGCTCGCATGTGTGCTGTGCTATTTCACTCAATTCTCAAAACAAGTTG
GTTTCTCTGAATCTCAAAGAAATGGAACAAACCTTCATCATGATCAAGCC
CGATGGGGTCCAAAGAGGCCTTGTTGGTGAAATCATCATCAGATTTGAGA
AGAAGGGTTTCTCCTTGAAGGGTTTGAAGCTTATGACTGTGGACCGCCCT
TTTGCTGAGAAGCACTATGAGGATTTGTCATCGAAGCCTTTCTTTGGTTC
TCTGATTGAGTACATTACCTCTGGTCCTGTTGTTGCTATGATTTGGGAGG
GTGAAGGTGTTGTTAAGACTGGCCGCACTATTATTGGAGCCACCAACCCT
GCGCAGTCTGCTCCTGGAACCATCCGTGGTGATTTGGCTATCGTGACGGG
CAGGAATATCATCCATGGAAGTGACTCAGTTGAGAGTGCCCAGAAAGAAA
TCGCCTTGTGGTTCCCTGATGGCCCTATTAACTGGCAGAGCAGCCTTCAC
CCTTGGATCTATGAGTAAACTAATGTTTGGTTGAGGAGCCTAATTGTTCC
TGCAGTTAGACTTATCCCTATCCCTATCCCTATTTCCTTATTTATGGTTA
CTCCTTGTTGGTGAACTGTTATGAAGTATTGAGTTAAATTGAGACCAATC
CTGGTTATGTTGGCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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