CK934526

Overview
NameCK934526
Unique NameCK934526
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length819
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934526 vs. ExPASy Swiss-Prot
Match: DHSO_PIG (Sorbitol dehydrogenase (Fragment) OS=Sus scrofa GN=SORD PE=3 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 2.451e-18
Identity = 45/89 (50.56%), Postives = 61/89 (68.54%), Query Frame = 1
Query:  175 NMAAWLMGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPG 441
            N++  + G   L+++ + +P  GP  VL++M +VGICGSDVHY +  R  +FVVK+PMV+GHE +G   KVGS V  L PGDR A EPG
Sbjct:    8 NLSLVVHGPGDLRLENYPIPEPGPNXVLLKMHSVGICGSDVHYWQHGRIGNFVVKKPMVLGHEASGTXVKVGSLVTHLKPGDRXAXEPG 96          
BLAST of CK934526 vs. ExPASy Swiss-Prot
Match: ADHP_ECOLI (Alcohol dehydrogenase, propanol-preferring OS=Escherichia coli (strain K12) GN=adhP PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.451e-18
Identity = 61/197 (30.96%), Postives = 102/197 (51.78%), Query Frame = 1
Query:  229 LPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-SCWRCDHCKGGRYNLCPEIKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGL---HACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD 807
            L SL   + L++M+  G+C +D+H    ++  DF  K  +++GHE  GV+ +VG  V +L PGDR ++      C  C++C  G   LC  +K  A   V G +A + +  AD   K+PD   L+  A       G+    A + + I P   + I G G +G + +  A+     +++ +DV+D +L +A E+GAD
Sbjct:   19 LRSLKHGEALLKMECCGVCHTDLH----VKNGDFGDKTGVILGHEGIGVVAEVGPGVTSLKPGDRASVAWFYEGCGHCEYCNSGNETLCRSVK-NAGYSVDGGMAEECIVVADYAVKVPD--GLDSAAASSITCAGVTTYKAVKLSKIRPGQWIAIYGLGGLGNLALQYAKNVFNAKVIAIDVNDEQLKLATEMGAD 208          
BLAST of CK934526 vs. ExPASy Swiss-Prot
Match: ADH_THEBR (NADP-dependent alcohol dehydrogenase OS=Thermoanaerobacter brockii GN=adh PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.201e-18
Identity = 68/204 (33.33%), Postives = 99/204 (48.53%), Query Frame = 1
Query:  226 ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYN----LCPEIKFFATPP-VHGSLANQVVHPADLCFK-LPDNVSLEEGAMC-EPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV 816
            E P+ GP+D +VR  AV  C SD+H   T+       +  M++GHE  G + +VGSEVK   PGDRV +      WR    + G +     +    KF      V G   +  V+ AD+    LP  + LE   M  + ++ G H    A+I     V ++G GP+GL+ + GA+  GA RI+ V      +  AK  GA +IV
Sbjct:   18 EKPAPGPFDAIVRPLAVAPCTSDIH---TVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFH--VNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGAELADIELGATVAVLGIGPVGLMAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGATDIV 216          
BLAST of CK934526 vs. ExPASy Swiss-Prot
Match: ADH1B_UROHA (Alcohol dehydrogenase 1B OS=Uromastyx hardwickii PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 7.132e-18
Identity = 63/212 (29.72%), Postives = 100/212 (47.17%), Query Frame = 1
Query:  247 YDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEIKF---------------FATPPVH-----GSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV 816
            ++V +++ A GIC SD H L      +F    P+++GHE AGV+E VG  V ++ PGD+V       C  C+ C+  R N+C + +                +   PV+     G+     V P D   K+  +  LE+  +     S G  A    A + P +   + G G +GL  ++G +A GA RI+ +D++  +   AKELGA   V
Sbjct:   34 HEVRIKILASGICRSDDHVLSGALKVNF----PIILGHEAAGVVESVGEGVTSMKPGDKVIPIFLPQCGECNSCRHPRGNVCKKSELGPFTGLLYDGTSRFTYQGKPVYHFVRTGTFTEYTVAPEDSVVKIDASAPLEKVCLIGCGFSTGYGAAINSAKVQPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGIDINKEKFPKAKELGATECV 241          
BLAST of CK934526 vs. ExPASy Swiss-Prot
Match: ADH_SULTO (NAD-dependent alcohol dehydrogenase OS=Sulfolobus tokodaii GN=adh PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.314e-18
Identity = 66/210 (31.43%), Postives = 105/210 (50.00%), Query Frame = 1
Query:  208 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLK----TLRCA-DFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEIKFFATPPVHGSLANQVVHP-ADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV 816
            LK++   +P      VL++++A G+C SDVH  +     LR   D  VK P+ +GHE AG IE+VG EV     GD VA+ P      C +C+ G  +LC   ++       G+ A  V+ P     +KL    ++E   +         A R+A++ P   ++++GA G +G + +  A+A     I+ VDV +  L  AK  GAD ++
Sbjct:   13 LKLEDIPIPKPKGSQVLIKIEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGRIEEVGDEVVGYSKGDLVAVNPWEGEGNCYYCRIGEEHLCDSPRWLGI-NYDGAYAEYVLVPHYKYLYKLRRLSAVEAAPLTCSGVTTYRAVRKASLDPSKTLVVIGAGGGLGTMAIQIAKAVSGATIIGVDVREEALEAAKRAGADYVI 221          
BLAST of CK934526 vs. ExPASy Swiss-Prot
Match: ADH_STAES (Alcohol dehydrogenase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=adh PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.216e-17
Identity = 60/205 (29.27%), Postives = 107/205 (52.20%), Query Frame = 1
Query:  208 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALE-PGISCWRCDHCKGGRYNLCPEIKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLH-ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV 816
            + I+   L  L P + LV+ +  G+C +D+H    ++ ADF     + +GHE  G + K+   V +L  GDRV++     +C  C++C  GR  LC ++   A   V G++A +V+  A+   K+P+N+     +      V  + A + + I P   + + G G +G + +  A+     ++V  D++D +L+ AKELGAD I+
Sbjct:   12 VSIEEKRLRELRPGEALVKTEYCGVCHTDLH----VKNADFGDVTGVTLGHEGIGRVIKIADNVDSLKVGDRVSIAWMYAACGNCEYCTTGRETLCRDV-LNAGYTVDGAMAEEVIVDANYAVKVPENLDPAAASSITCAGVTTYKAVKVSGIEPGQWLGVFGVGGLGNLALQYAKNVMGAKVVAFDINDDKLNFAKELGADAII 211          
BLAST of CK934526 vs. ExPASy Swiss-Prot
Match: ADH_SULSR (NAD-dependent alcohol dehydrogenase OS=Sulfolobus sp. (strain RC3) GN=adh PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.589e-17
Identity = 64/210 (30.48%), Postives = 107/210 (50.95%), Query Frame = 1
Query:  208 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLK----TLRCA-DFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEIKFFATPPVHGSLANQVVHP-ADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV 816
            L ++  ++P      VL++++A G+C SDVH  +     LR   D  VK P+ +GHE AG IE++G EV     GD VA+ P      C +C+ G  +LC   ++       G+ A  V++P     +KL    ++E   +         A R+A++ P   ++++GA G +G + +  A+A G   I+ VDV +  +  AK  GAD ++
Sbjct:   13 LVLKDIDIPKPKGAQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEMGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAEYVLNPHYKYMYKLRRLNAVEASPLTCSGITTYRAVRKASLDPTKTLVVVGAGGGLGTMAVQIAKAVGGATIIGVDVREEAVETAKRAGADYVI 221          
BLAST of CK934526 vs. ExPASy Swiss-Prot
Match: ADH_SULSO (NAD-dependent alcohol dehydrogenase OS=Sulfolobus solfataricus GN=adh PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.710e-17
Identity = 66/210 (31.43%), Postives = 104/210 (49.52%), Query Frame = 1
Query:  208 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLK----TLRCA-DFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEIKFFATPPVHGSLANQVVHP-ADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV 816
            L +Q   +P      VL++++A G+C SDVH  +     LR   D  VK P+ +GHE AG IE+VG EV     GD VA+ P      C +C+ G  +LC   ++       G+ A  V+ P     +KL    ++E   +         A R+A++ P   +L++GA G +G + +  A+A     I+ VDV +  +  AK  GAD ++
Sbjct:   13 LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVI 221          
BLAST of CK934526 vs. ExPASy Swiss-Prot
Match: ADH_STAEQ (Alcohol dehydrogenase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=adh PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.710e-17
Identity = 60/205 (29.27%), Postives = 107/205 (52.20%), Query Frame = 1
Query:  208 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALE-PGISCWRCDHCKGGRYNLCPEIKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLH-ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV 816
            + I+   L  L P + LV+ +  G+C +D+H    ++ ADF     + +GHE  G + +V   V +L  GDRV++     +C  C++C  GR  LC ++   A   V G++A +V+  A+   K+P+N+     +      V  + A + + I P   + + G G +G + +  A+     ++V  D++D +L+ AKELGAD I+
Sbjct:   12 VSIEEKRLRELKPGEALVKTEYCGVCHTDLH----VKNADFGDVTGVTLGHEGIGRVIEVADNVDSLKVGDRVSIAWMYAACGNCEYCTTGRETLCRDV-LNAGYTVDGAMAEEVIVDANYAVKVPENLDPAAASSITCAGVTTYKAVKVSGIEPGQWLGVFGVGGLGNLALQYAKNVMGAKVVAFDINDDKLNFAKELGADAII 211          
BLAST of CK934526 vs. ExPASy Swiss-Prot
Match: FADH_PSEAE (Glutathione-independent formaldehyde dehydrogenase OS=Pseudomonas aeruginosa GN=fdhA PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.037e-17
Identity = 61/201 (30.35%), Postives = 97/201 (48.26%), Query Frame = 1
Query:  247 YDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEIKFFATPPVHGSL---------ANQVVHP-ADL-CFKLPDNVSLEEG-----AMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG 801
            + V++R+ +  ICGSD H ++    A     E +V+GHE  G + ++G  V+T+  GD V++   ++C  C  CK     +C  +        +G +         A  V+ P AD    KLP+  +  E       + + L  G H    A +GP + V I GAGP+GL     AR  GA  +++ DV+  RL+ AK+ G
Sbjct:   35 HGVILRVVSTNICGSDQHMVRGRTTAP----EGLVLGHEITGEVVEIGRGVETMKIGDLVSVPFNVACGHCRTCKEQHTGVCLTVNPARAGGAYGYVDMGGWVGGQAEYVLVPYADFNLLKLPNREAAMEKIRDLTCLSDILPTGYHGAVTAGVGPGSTVYIAGAGPVGLAAAASARLLGAAVVIVGDVNPTRLAHAKKQG 231          
The following BLAST results are available for this feature:
BLAST of CK934526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 311
Match NameE-valueIdentityDescription
DHSO_PIG2.451e-1850.56Sorbitol dehydrogenase (Fragment) OS=Sus scrofa GN... [more]
ADHP_ECOLI2.451e-1830.96Alcohol dehydrogenase, propanol-preferring OS=Esch... [more]
ADH_THEBR3.201e-1833.33NADP-dependent alcohol dehydrogenase OS=Thermoanae... [more]
ADH1B_UROHA7.132e-1829.72Alcohol dehydrogenase 1B OS=Uromastyx hardwickii P... [more]
ADH_SULTO9.314e-1831.43NAD-dependent alcohol dehydrogenase OS=Sulfolobus ... [more]
ADH_STAES1.216e-1729.27Alcohol dehydrogenase OS=Staphylococcus epidermidi... [more]
ADH_SULSR1.589e-1730.48NAD-dependent alcohol dehydrogenase OS=Sulfolobus ... [more]
ADH_SULSO2.710e-1731.43NAD-dependent alcohol dehydrogenase OS=Sulfolobus ... [more]
ADH_STAEQ2.710e-1729.27Alcohol dehydrogenase OS=Staphylococcus epidermidi... [more]
FADH_PSEAE6.037e-1730.35Glutathione-independent formaldehyde dehydrogenase... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004258_A12 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IF_A12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934526 ID=CK934526; Name=CK934526; organism=Citrus sinensis; type=EST; length=819bp
GCGGGGGCGGCCNNNTCAAATCATATCCCATANNNAGAATCAGAATAAAT
GGTAGCTTAAAATGTTGTGTACAGAGTGAAGTCTCTTCTGTGCACTTGTG
TTTTTGAAGGGTAAAAAGCAAATATGGGCAAAGGAGGGATGTCACAAGGA
GAAAAGAAGGATGGAGAAGAAGTTAACATGGCAGCTTGGCTTATGGGTGT
CAACACCCTCAAGATTCAACCTTTTGAGCTTCCTTCTCTGGGACCATATG
ATGTTTTAGTCAGGATGAAAGCCGTTGGTATTTGTGGAAGTGATGTGCAT
TATCTCAAGACCTTGAGGTGTGCCGATTTTGTTGTGAAAGAGCCTATGGT
GATTGGGCACGAGTGTGCTGGGGTCATAGAGAAGGTGGGAAGCGAGGTGA
AGACTTTGGTGCCCGGTGACCGTGTGGCCCTGGAACCCGGGATCAGCTGC
TGGCGATGCGATCACTGCAAAGGAGGTCGATACAATTTGTGTCCAGAGAT
AAAATTTTTTGCAACTCCGCCCGTTCATGGTTCCCTGGCTAATCAGGTGG
TGCATCCTGCAGACCTATGTTTTAAGCTGCCGGACAATGTGAGCCTGGAG
GAAGGGGCTATGTGTGAGCCCTTGAGTGTTGGTCTTCATGCCTGCCGCCG
TGCCAATATCGGTCCTGAGACAAATGTGCTTATCATGGGAGCAGGGCCCA
TAGGACTTGTCACAATGCTAGGAGCTCGTGCTTTTGGAGCTCCTAGAATT
GTCATTGTGGATGTGGATGACTATCGTTTATCTGTTGCAAAGGAACTTGG
TGCAGATAATATTGTTAAA
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